ID   AJ842138; SV 1; linear; genomic DNA; STD; VRL; 533 BP.
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AC   AJ842138;
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DT   25-JUL-2005 (Rel. 84, Created)
DT   25-JUL-2005 (Rel. 84, Last updated, Version 1)
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DE   Pepper golden mosaic virus partial AV1 gene for coat protein, clone NI-D3C
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KW   AV1 gene; coat protein.
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OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-533
RA   Rojas A.;
RT   ;
RL   Submitted (22-SEP-2004) to the INSDC.
RL   Rojas A., Plant Biology and Forest Genetics, Swedish Univ. of Agricult.
RL   Sciences, P.O. Box 7080, SE-750 07 Uppsala, SWEDEN.
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RN   [3]
RX   DOI; 10.1111/j.1365-3059.2005.01226.x.
RX   AGRICOLA; IND43735561.
RA   Ala-Poikela M., Svensson E., Rojas A., Horko T., Paulin T.,
RA   Valkonen J.P.T., Kvarnheden A.;
RT   "Genetic diversity and mixed infections of begomoviruses infecting tomato,
RT   pepper and cucurbit crops in Nicaragua";
RL   Plant Pathol. 54(4):448-459(2005).
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DR   MD5; 58d44d53e2b4d17596abd26ad4307bca.
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FH   Key             Location/Qualifiers
FH
FT   source          1..533
FT                   /organism="Pepper golden mosaic virus"
FT                   /segment="A"
FT                   /host="Lycopersicon esculentum"
FT                   /mol_type="genomic DNA"
FT                   /country="Nicaragua:CNIA: Managua"
FT                   /clone="NI-D3C"
FT                   /db_xref="taxon:223301"
FT   CDS             <1..>533
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q4H0N9"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q4H0N9"
FT                   /protein_id="CAH57022.1"
FT                   /translation="IYRTYRSTDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGN
FT                   GITHRVGKRFCVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNM
FT                   YDNEPSTATVKNDLRDRFQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAG
FT                   KYENHTENALLLYM"
XX
SQ   Sequence 533 BP; 145 A; 115 C; 146 G; 127 T; 0 other;
     gatatatcgt acgtatagaa gcacagatgt gcctagagga tgtgaagggc cgtgtaaggt        60
     ccagtccttc gagcagcggc atgacatctc gcatgttggc aaggtcatgt gcatttcgga       120
     cgtgacacgt ggtaatggta ttactcatcg tgtaggcaag cgtttctgcg tcaagtctgc       180
     atacgttctg ggtaagatat ggatggacga gaatatcaag ctcaagaacc acaccaacag       240
     cgtcatgttc tggctcgtgc gagataggag accatatggt acccctatgg actttggtca       300
     agtgttcaac atgtatgaca acgagcccag tacagccact gtgaagaacg atcttcgtga       360
     tcgtttccaa gtcatgcaca ggttctcggc taaggtcaca ggtggacagt atgccagcaa       420
     cgagcaggca ttggttaggc gtttctggaa ggtgaacaac tacgtagtgt acaaccatca       480
     ggaagctggc aaatacgaga atcatactga gaacgccctg ctactgtata tgg              533
//