ID AJ704948; SV 1; circular; genomic DNA; STD; VRL; 2748 BP. XX AC AJ704948; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA B, complete DE sequence, isolate EACMZV-[K275] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2748 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 181cf64f8c53bd3bd6961c2cf558d0cb. XX FH Key Location/Qualifiers FH FT source 1..2748 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K275]" FT /mol_type="genomic DNA" FT /country="Kenya:Makueni, Kibwezi" FT /clone="K275FB-1[2002]" FT /db_xref="taxon:223275" FT CDS 336..1136 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:Q1JU22" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q1JU22" FT /protein_id="CAG29061.1" FT /translation="MSPVRQCKMYSVYRRGYKTPYRSPYGSRVTPYVNRKTAVKQTAKS FT RVSRKLAYESPKGLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHI FT KLLSLRVSGTVNISQSGGDDNMGERTTMRGIFFMVCLVDKKPFVPEGVSILPTFNELFG FT EYESVYGMPRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPIWSSFKD FT VDNSSTGGNYKNINKNAILVSYVWVSLCRTTCDVYSQFVLNYVG" FT CDS complement(1268..2191) FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:Q1JU21" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q1JU21" FT /protein_id="CAG29062.1" FT /translation="MDNHFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNATGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWKILYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPTAHSQRPITHRPITILPGETWATKSQIGLPSSSG FT PARLDHFRSRSMRMDPSITPTDLDNESTEYPYQRLHRLNTPELDPGDSVSQTQSDSVSR FT KDLETLLESTINKCLIKIKSEAPRPL" XX SQ Sequence 2748 BP; 765 A; 449 C; 731 G; 803 T; 0 other; accggatggc cgcgcccgaa aaagcagatg ggccccagaa tggcccccgc gcactaagta 60 atgtcagcca accatgtgca agactgggag actcggtagt taggaatgga ggataaagtg 120 gtccctacgc actaagattg acaggcaatt ttattgctat gtgtgtatca tatttttata 180 ggtgtgtgac ggggcaatct aaaggtatgt tatggggcct atcataaaaa agcaaaatag 240 aggttcctat ttacatattg attatagttt tatgtgcgga tatatgatcc gccacgtgtt 300 tataatggat atggattgtc ctataaatat ttggcatgtc tcccgttcgt caatgcaaga 360 tgtattctgt atacagacgt gggtataaga cgccgtatag gagtccgtat ggctctcgtg 420 taacaccata tgtgaatcgt aagaccgctg ttaaacagac ggctaaatcg cgtgtatcgc 480 gaaagttggc gtatgaatcg ccaaaaggtc tatatacgcg acgctcattg gaggatatcc 540 ataatggggc ttccttgaag ttgcctcaac agggggatta tacgtcatac gtgacactcc 600 catgtcgagg catcgatggt aatgggggta ggtctgtgga tcatataaaa ttattaagct 660 tgagggtttc tgggaccgtc aacatcagtc aatccggtgg tgatgacaat atgggagaaa 720 gaacgaccat gaggggtatt tttttcatgg tttgtcttgt tgataagaaa cctttcgttc 780 cagagggggt cagcatattg ccaacgttca atgagttgtt tggggaatat gaatccgtgt 840 atggcatgcc taggttgaag gaaaacgtcc gtcaccgtta tcgcgttatt gggacgtcga 900 aattatatat aacgaccgat gaagatcata tccagaagcc ttttagtcta cgtcgaagac 960 taagtggagg gaaatatcct atatggtcgt cgttcaagga cgtggataat agtagtacag 1020 gtggtaacta taaaaatata aataagaacg ctatactcgt tagttatgtg tgggtttcgc 1080 tatgtcggac cacgtgtgat gtgtattcgc agtttgtact taattacgtc ggctgataat 1140 aaaacgatat aagtgttgta tggacattaa agatgtggga tcgaactaaa caagagatga 1200 acattaatgg gaagcataaa gagtgttatt atgtgccgaa gcaaatattg tacatatata 1260 tggtttatta caatggcctt ggtgcttcgg atttgatctt gattaggcac ttgttgatgg 1320 tactctcaag cagtgtctcg agatcctttc tggatactga gtcggattgg gtctgtgata 1380 ccgagtctcc tgggtctaac tctggtgtgt ttaatctgtg tagtcgctgg taaggatatt 1440 cggtggactc gttgtctagg tccgttggtg ttatcgatgg gtccattctc atggaccgtg 1500 aacgaaagtg gtccagcctt gctgggccgg atgagcttgg tagcccaatc tgagactttg 1560 tggcccatgt ttctccaggc agtatggtga tgggcctgtg ggttatgggt cgttgactat 1620 gagcagttgg agttggattt agtaatctcc gtcttgtttc tcctttttcc acggaccaga 1680 agtctatgca gtctttggtg tatccctttg ataagatgtt aattgttggg ggtttgaaac 1740 gtatgtccgt ggaatgtttg gccgaggata atctgagctt ggccttgatg gatgcgaatt 1800 tcacgccttc tatgacgttt gagtcttcga ccctgtatag gattttccaa ggggagggtt 1860 cggaaatcga aaaatatgta gaagagaagt agtggaggtc tacgttgcaa gctatgggga 1920 aagtgaatgc tgcctgagct gcgtcttcaa ggctgacgcg attatctctg atttctacga 1980 taaccgaccc agttgcgtta aatgggacct ggtttcggta ttcaattata atgtggtcga 2040 ttttcataca tcggcctttg agtcgcatgg tcgcctgctc gaatgagctc ggaaattgga 2100 gattgattgg tgcagcatcg tttgttaagg cgtactctgt gcgtttgctg tttatgtaat 2160 tattgtctgt gacggtgaaa tggttgtcca ttctatgaat ttaaaaaaga agggttagta 2220 aacggagaga agtcagaata aggtttataa aatgtcttgt agacatgtaa gcatatatgc 2280 atttggtata tataagaaca cacgagatca gaacaaggac catatatgtt gaattggccg 2340 cgcagcggaa tggaattcag aaaaatctac caacaaagga aaaagtcgaa tggtgttatg 2400 tgatgtaaat cacttacaga atcactgatg aagcagtctg gagtgaattc ctgtgtcaat 2460 tgggagaaaa aaaaaagaaa taaaagtata acgtattggg agaaaaagga aagtgagcat 2520 atgttatgcg ccgtgtcgtg aagtgatatg ccatggggtg tttatatagg cgataataag 2580 tgacaggtgg tagagagaga aagaagagag aagcgagagc aattggagac acctcggtgg 2640 atgtctctac ggaattggag acaatatata gtgtctccaa atggcataat ggtaaatagg 2700 catatctatg ttcaaaattt gaaccaaagc ggccatccgt ataatatt 2748 //