ID AJ704939; SV 1; circular; genomic DNA; STD; VRL; 2775 BP. XX AC AJ704939; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus segment DNA B, complete sequence, isolate DE EACMV-[K29] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2775 RA Bull S.E.; RT ; RL Submitted (12-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 23f1a01b05612d0d95f933e43f30e19b. XX FH Key Location/Qualifiers FH FT source 1..2775 FT /organism="East African cassava mosaic virus" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMV-[K29]" FT /mol_type="genomic DNA" FT /country="Kenya:Kwale, Kibaoni" FT /clone="K29FB-137[2001]" FT /db_xref="taxon:62079" FT CDS 358..1134 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:Q1JU40" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q1JU40" FT /protein_id="CAG29043.1" FT /translation="MYSVYRRGYKTPYRSPYGARVTPYVYRKTAVKQTSKSRVPRKLAY FT ESPKCLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS FT GTVNVSQCGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEEHIQKPFTLRRRLSGGKYPMWSSFKDVDNSSTGG FT NYKNINKNAILVSYVWVSLCRSTCDVYSQFVLNYVG" FT CDS complement(1263..2186) FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:Q1JU39" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q1JU39" FT /protein_id="CAG29044.1" FT /translation="MDNQFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNAIGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPHAHSQRPITHRPITILPGETWATKSQIGLPSSSG FT PARLDHFRSQSMRMDPSTTPTDLDNESTEYPYQTLHRLHTPELDPGDSVSQAPSDSVSR FT KDLETLLESTINKCLIKIKSEAPRQL" XX SQ Sequence 2775 BP; 770 A; 448 C; 744 G; 813 T; 0 other; accggatggc cgcgcccgaa aaagcagggt gaccccacaa tggcccccac gcactaagta 60 atgtcagcca atcatgttca agactggaag acgcggtagt tacgtattga tgagtaagtg 120 gtcccgacgc actgatgttg acaggcaatt ggattgctat gtgtgtatca tattcatata 180 ggtgtgttac tggttaatct aaagttaggt gatggggcct atcataaaaa cgcaatacat 240 aggtacgtat gtacatattg attatattgt tgtttgcgga tatatgatcc gccacgtgta 300 taatggatat ggaatgtcct ataaatattt ggcatgtctc tcgtccgtta atgcaagatg 360 tattctgttt acaggcgtgg gtataagacg ccgtatagga gtccgtatgg cgctcgtgta 420 acaccatatg tgtatcgtaa gactgctgtt aaacagacgt ctaaatctcg tgtaccgcga 480 aagttggcgt atgaatcgcc aaaatgtcta tatacgcgac gctcattgga ggatatccat 540 aatggggctt ccttaaagtt gcctcaacag ggggattata cgtcctatgt gacactccca 600 tgtcgaggta tcgatggtaa tgggggtagg tctgttgatc atataaaatt attaagcttg 660 agggtgtctg ggaccgtcaa cgtcagtcaa tgcggtggtg atgataatat gggagagaga 720 acgaccatga ggggtatttt tttcatggct tgtcttgttg ataagaaacc tttcgttcca 780 gagggggtta gtatattgcc gacgtttaat gagttgttcg gggaatatga atccgtgtat 840 ggcatgccta ggttgaagga aaacgttcgt caccgttatc gcgtgattgg gacgtcgaaa 900 ttatatataa cgaccgatga agagcacatc cagaagccat ttactctacg tcgaagacta 960 agtggaggga aatatcctat gtggtcgtcg ttcaaggatg tggataatag tagtacaggt 1020 gggaactata aaaatataaa taagaatgct atactagtta gttatgtgtg ggtatcgcta 1080 tgtcggtcca cgtgtgatgt gtattcccag tttgtactta attacgtcgg ttgataataa 1140 aacgagataa gtgtgttgac attaattatg ttttaactaa cgaaatatga gatgaacatc 1200 aatggaaagc acatatagtg ttattatgta gcaaatcaaa tatcgtacat atcaagtgtt 1260 tattacaatt gcctgggtgc ttcggatttt attttaatga gacacttgtt tatggtactc 1320 tcaagcagtg tctcgaggtc ctttctggat acggagtctg atggggcctg tgataccgag 1380 tcccctgggt ccaattcggg tgtgtgtaat ctgtgtagtg tctggtaagg atattctgtg 1440 gattcgttgt ctaagtccgt tggtgttgtc gatgggtcca ttctcatgga ctgtgaacga 1500 aagtggtcta gtcttgccgg gccggatgag ctgggtagcc caatctggga cttcgtggcc 1560 catgtttctc cagggagaat ggtgatgggc ctgtgggtta tgggtcgttg gctatgagca 1620 tgtggagttg gatttagtaa tctccgtcgt gtttctcctt tttccacgga ccagaagtct 1680 atgcaatcct ttgtgtagcc cttggataat atgttaattg ttgggggttt gaaacgtatg 1740 tccgtggaat gtttggccga tgataatcgg agcttggcct tgatggatgc gaatttcacg 1800 ccttctatga cgtttgagtc ttcgactctg tacatgatcc tccaagggga gggttctgaa 1860 atcgagaaat atgtagacga gaagtagtgg aggtctacgt tgcaagctat tgggaaagtg 1920 aatgctgctt gagcagcgtc ttcaaggctg acgcgattgt ctctgatttc tacgataacc 1980 gacccaattg cgttaaatgg gacctggttt cggtattcaa ttataatgtg gtcgattttc 2040 atacatcggc ctttgagtcg catggtcgcc tgctcgaatg agctcggaaa ttggagattg 2100 attggtgcag catcgttggt taatgcgtac tctgtgcgtt tgctgttgat gtaattattg 2160 tctgtgacgg tgaattggtt gtccattcta tgaaggaaaa aaacaagggt tagtaaacgg 2220 agagaagaga tgtataaaag tcagagcaat tgtataaaat gtcttgtaga catggaagca 2280 tatatgcatt gggtatcgat aataacacac taaagcagaa caaggatcat atatgtataa 2340 atggccgcgc agcggattgg aagtcagaca aatcggcgaa taaataaaaa agtcgaatga 2400 ggttatggta tggaaataac ttacggaagc acctaggaag cagtcgggat tgaattcttg 2460 ttataagtgg agaaaacaaa gaaacaaaat ttaactaaat aaaagtatga cggattggta 2520 tagaaaggaa agtgagcata ttatatgcgc cgtgtcgtta aatgagatgt tattgggtgt 2580 ttatataggc gttaataagc gagacgtggt agagagagaa agaagagaga ggcgagagca 2640 atcgggggac actcaaagtc tgtagcaatc gggggaaagg ggggcaattt atatgatgtc 2700 ccctaaatgg catttatgta atatcctcat tgaatgtgaa aggcaaacgt ggaaagcggc 2760 catccgtata atatt 2775 //