ID   AJ557451; SV 1; circular; genomic DNA; STD; VRL; 2675 BP.
XX
AC   AJ557451;
XX
DT   05-JAN-2004 (Rel. 78, Created)
DT   29-MAR-2004 (Rel. 79, Last updated, Version 2)
XX
DE   Sida micrantha mosaic virus segment A, complete genome, isolate A2B2
XX
KW   AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; coat protein;
KW   complete genome; replication associated protein; replication enhancer;
KW   transcriptional regulator.
XX
OS   Sida micrantha mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2675
RA   Jovel J.;
RT   ;
RL   Submitted (24-APR-2003) to the INSDC.
RL   Jovel J., Department of Molecular Biology, Stuttgart University,
RL   Pfaffenwaldring 57, Stuttgart, 70550, GERMANY.
XX
RN   [2]
RX   DOI; 10.1007/s00705-003-0235-1.
RX   PUBMED; 15045569.
RA   Jovel J., Reski G., Rothenstein D., Ringel M., Frischmuth T., Jeske H.;
RT   "Sida micrantha mosaic is associated with a complex infection of
RT   begomoviruses different from Abutilon mosaic virus";
RL   Arch. Virol. 149(4):829-841(2004).
XX
DR   MD5; bb33fdee67f5766da994166c73c8b4c3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2675
FT                   /organism="Sida micrantha mosaic virus"
FT                   /segment="A"
FT                   /isolate="A2B2"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:228897"
FT   CDS             268..1023
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q70PB8"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PB8"
FT                   /protein_id="CAD89706.1"
FT                   /translation="MPKRDPSWRQMAGTSKVSRSSNFSPRGGGGPKYNKASEWVNRPMY
FT                   RKPRIYRTLRTPDIPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGIAHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(1020..1418)
FT                   /gene="AC3"
FT                   /product="replication enhancer"
FT                   /db_xref="GOA:Q70PB7"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PB7"
FT                   /protein_id="CAD89707.1"
FT                   /translation="MDSRTGEFITAHQAENGVYIWEITNPLYFKMYNVEDLPYTRTRVY
FT                   HIQIRFNHSLRKVLGLHKAYLNFQVWTTSLTASGTTYLIRLRRLVMMYLDQLGVISLNN
FT                   VIRAVRFATDKAYVNYVLEDHDIKFKFY"
FT   CDS             complement(1165..1584)
FT                   /gene="AC2"
FT                   /product="transcriptional regulator"
FT                   /db_xref="GOA:Q70PB6"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PB6"
FT                   /protein_id="CAD89708.1"
FT                   /translation="MHSSVLGHSTMLNSSSSTPPSIKPRHRIAKKRAIRRRRVDIQCGC
FT                   SIYLHLNCSGHGFTHRGIHHCTSGREWRLYLGDNKSPVFQDVQRRGPAVHEDQSVPHTD
FT                   KVQPQPQESIGSPQGLPELPSLDDFSDSFWNDLFD"
FT   CDS             complement(1475..2551)
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q70PB5"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PB5"
FT                   /protein_id="CAD89709.1"
FT                   /translation="MPPPKRFKISAKNYFLTYPQCSLTKEETLSQLQSLSTPVNKKFIK
FT                   ICRELHENGEPHLHVLIQFQGKFQCTNNRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT                   EKDGDTLEWGEFQIDGRSARGGCQTANDAAAEALNAPSKEIALQIIREKLPEKFLFQFH
FT                   NLNSNLDRIFAKAPEPWAPPFRLSSFTDVPDEMQEWADDYFGRGSAARPLRPISLIVEG
FT                   GSRTGKTMWARALGPHNYFSGHLDFNSKVYSDQVEYNVIDDVAPHYLKLKHWKELVGAQ
FT                   QKWQTNCKYGKPRLIEGGVPSIVLCNPGEGACYKDFLDKEENAQLRAWTLHNAKFIFLD
FT                   APLYQTETQDCQEESHQA"
FT   CDS             complement(2137..2394)
FT                   /gene="AC4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PB4"
FT                   /protein_id="CAD89710.1"
FT                   /translation="MGSLISTSLYSSRGNSNARITDSSTWYPQPGQHISILTYRELNPR
FT                   PTLSPTSKRTEILSSGGNSRSTVEVLEAVARQLTTLPQKP"
XX
SQ   Sequence 2675 BP; 662 A; 616 C; 659 G; 738 T; 0 other;
     accggatggc cgcgcgattt tccccccccc ccacgtggcg ctctggtggt cgtgcgattt        60
     ctctcccccc ctctcgcgcg acgtggagct ctggtgtccg cgcgttccac ccgcgcgctc       120
     tgcctttaat ttaaattaaa gggaataact ttcatcagga ccaatgaaat tgcgtccttt       180
     aagcgtaaat atcagcgtaa gacttgggcc ctaagttgtt tgacgtctat aaaattaggt       240
     catgtatgac gtcagtatta tttcaaaatg cctaagcggg atccctcatg gcgccagatg       300
     gcgggaacct caaaggttag ccgctcttct aatttctcac ctcgtggagg tggaggccca       360
     aaatataaca aggcctcaga atgggtgaac aggcccatgt acaggaagcc caggatatac       420
     aggacgctaa ggacgcctga tattcctaga ggctgtgaag ggccttgtaa agtccagtca       480
     tacgagcaac gccatgatat ctcacatgtc gggaaggtca tgtgcatctc tgacgtcacc       540
     cgtggcaacg gtatagcaca ccgtgtcggt aagcgttttt gcgttaagtc tgtgtacatt       600
     ttagggaaga tatggatgga cgagaacatc aagctcaaga accacacgaa cagtgtcatg       660
     ttctggttgg tcagggaccg tagaccgtat ggtactccta tggactttgg ccaggtgttc       720
     aacatgtttg acaacgagcc cagcactgct acggtgaaga acgatctccg tgatcgttat       780
     caagttatgc acaagttcta cgccaaggtc actggtggtc aatatgccag caacgagcag       840
     gctctggtca agaggttctg gaaggtcaac aatcatgtgg tgtacaacca ccaggaagct       900
     ggcaagtatg agaatcacac ggagaatgct ttgttactgt acatggcatg tactcatgcc       960
     tctaaccctg tgtatgcaac gcttaagatt cggatctatt tctacgattc gataaccaat      1020
     taataaaatt tgaattttat atcatgatct tcaagtacat agtttacata ggctttgtca      1080
     gtggcaaagc gaacagctct aattacatta ttaagggaaa ttacacctaa ttggtctaag      1140
     tacatcatta caaggcgtct aagcctaatc aaataagtcg ttccagaagc tgtcagagaa      1200
     gtcgtccaga cttggaagtt caggtaggcc ttgtggagac ccaatacttt cctgaggctg      1260
     tggttgaacc ttatctgtat gtggtacact ctggtcctcg tgtacggcag gtcctctacg      1320
     ttgtacatct tgaaatacag gggatttgtt atctcccaga tatagacgcc attctctgcc      1380
     tgatgtgcag tgatgaattc cccggtgcgt gaatccatgg ccggagcagt taaggtgtag      1440
     gtatatggag cagccgcact gtatgtccac tcgtctacgc ctgatggctc tcttcttggc      1500
     aatcctgtgt ctcggtttga tagagggggg cgtcgaggaa gatgaattta gcattgtgga      1560
     gtgtccaagc acggagctgt gcattttcct ctttgtctag gaagtcttta tagcaggccc      1620
     cctctccagg attgcatagc acgattgaag ggaccccacc ttcaatcaaa cgaggctttc      1680
     cgtacttgca gtttgtctgc catttttgtt gggcccctac tagctctttc cagtgtttca      1740
     actttaggta atgcggagcg acgtcatcaa tgacgttata ctccacttga tcagaatata      1800
     cctttgagtt gaaatccaga tggccactga agtaattatg tgggcctaat gctctagccc      1860
     acatcgtctt gccagttcga gaaccacctt caacaattaa acttataggc ctcaatggcc      1920
     gcgcagcgga acccctccca aaataatcat cggcccactc ttgcatctcg tctggcacgt      1980
     cagtgaatga ggagagtcga aacggagggg cccatggctc cggagccttt gcaaagatcc      2040
     tatctaaatt actatttaga ttgtgaaact ggaataggaa cttttccggc aacttctccc      2100
     ggattatctg caaggcgatt tctttggaag gggcgttcaa ggcttctgcg gcagcgtcgt      2160
     tagctgtctg gcaaccgcct ctagcacttc taccgtcgat ctggaattcc ccccactcga      2220
     gagtatctcc gtccttttcg atgtaggact taacgtcgga cgaggattta gctccctgta      2280
     tgttaggatg gaaatgtgct gacctggttg gggataccag gtcgaagagt ctgttattcg      2340
     tgcattggaa tttcccctgg aactgtataa ggacgtggag atgaggctcc ccattttcgt      2400
     ggagctctct gcagattttg atgaacttct tgttaactgg tgtcgataag ctctgtaatt      2460
     gggaaagtgt ctcctctttg gttaaggagc actgtggata agtcaagaaa taattcttgg      2520
     cacttatttt aaaacgcttt ggcggtggca tttttgtaat taaggggtgt accccaattg      2580
     agagctcgct ctataagtca tatgaattgg ggtaatgggg acaatatata gtagaagatc      2640
     ctaaggggct ttaagcggcc atccgcacta atatt                                 2675
//