ID   AJ551469; SV 1; linear; genomic RNA; STD; VRL; 755 BP.
XX
AC   AJ551469;
XX
DT   13-MAR-2004 (Rel. 79, Created)
DT   13-MAR-2004 (Rel. 79, Last updated, Version 1)
XX
DE   Garlic virus A partial CP gene for Coat protein and partial NABP gene for
DE   Nucleic-acid binding protein, isolate CFL, genomic RNA
XX
KW   Coat protein; CP gene; NABP gene; Nucleic-acid binding protein.
XX
OS   Garlic virus A
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Allexivirus.
XX
RN   [1]
RP   1-755
RA   Adams M.J.;
RT   ;
RL   Submitted (27-MAR-2003) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s00705-003-0234-2.
RX   PUBMED; 14991435.
RA   Chen J., Zheng H.Y., Antoniw J.F., Adams M.J., Chen J., Lin L.;
RT   "Detection and classification of allexiviruses from garlic in China";
RL   Arch. Virol. 149(3):435-445(2004).
XX
DR   MD5; ce7b696c2dea6a367be6ff6ee0b123b5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..755
FT                   /organism="Garlic virus A"
FT                   /host="Allium sativum"
FT                   /isolate="CFL"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Inner Mongolia A.R., Linxi county"
FT                   /db_xref="taxon:12433"
FT   CDS             <1..444
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="Coat protein"
FT                   /function="encapsidation"
FT                   /db_xref="GOA:Q70SG5"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q70SG5"
FT                   /protein_id="CAD86600.1"
FT                   /translation="WACYHNGSSRFVTLNTDAPCGIAHSELKDLVENYCTLRQFCGFYA
FT                   KACYVAGKQQNKPPANWSRKGYQDESKFAAFDFFSAVLSDSSPSPPGGMRHKPTDAEIL
FT                   AHSMNAKMSIVESRRATNMVSTRADLLAQQQIHEQPKPPMITF"
FT   CDS             444..>755
FT                   /gene="NABP"
FT                   /product="Nucleic-acid binding protein"
FT                   /db_xref="GOA:Q70SG4"
FT                   /db_xref="InterPro:IPR008891"
FT                   /db_xref="UniProtKB/TrEMBL:Q70SG4"
FT                   /protein_id="CAD86601.1"
FT                   /translation="MHPHDFNLLCCLHFAQPSLSQDLKTLLFFSCVAECKLIRKTSQNK
FT                   PFQGTSKFAQRRRAKRYNRCFNCGAYLLNNHECRILVSRAQSDVLAVIHEGPAKLYAEG
FT                   "
XX
SQ   Sequence 755 BP; 211 A; 213 C; 152 G; 179 T; 0 other;
     tgggcgtgct accacaacgg ctcttcacgc ttcgtcactt tgaacactga cgcaccctgc        60
     ggaatcgcac actcagaact caaggacctc gtcgaaaact attgcacctt gagacagttc       120
     tgtggtttct atgccaaagc atgttacgtt gccggcaagc agcaaaacaa accccctgct       180
     aactggtcta ggaagggcta ccaggacgag tcaaagtttg ccgccttcga tttcttcagt       240
     gctgtgctaa gtgattcttc cccgagccca cccggaggca tgagacacaa acctacagac       300
     gcggaaattc ttgcacactc gatgaatgcc aaaatgtcca tagtggaatc taggcgcgcc       360
     accaacatgg tatccacacg cgcagatttg ctcgcacaac aacaaataca cgaacaacca       420
     aaaccgccca tgattacatt ctgatgcacc ctcacgactt caatttactt tgctgcctac       480
     attttgcaca accttcactt tctcaagatc tcaaaaccct tctcttcttc agttgcgtcg       540
     ccgagtgtaa attaatacgt aaaactagcc agaataagcc attccaaggc acttctaagt       600
     ttgctcaacg tcgcagagca aaacgctaca ataggtgttt caactgcggc gcctacttgc       660
     taaataatca cgagtgtagg attttagtgt cacgcgctca atcagatgtg ctagccgtca       720
     tacatgaagg acccgctaag ctatatgctg aaggg                                  755
//