ID AJ544272; SV 1; linear; genomic RNA; STD; VRL; 3380 BP. XX AC AJ544272; XX DT 13-AUG-2004 (Rel. 80, Created) DT 13-AUG-2004 (Rel. 80, Last updated, Version 1) XX DE Barley mild mosaic virus gene for polyprotein, clone 2-2, genomic RNA XX KW P1 protein; P2 protein; polyprotein. XX OS Barley mild mosaic virus OC Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; OC Potyviridae; Bymovirus. XX RN [1] RP 1-3380 RA Adams M.J.; RT ; RL Submitted (14-FEB-2003) to the INSDC. RL Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research, RL Harpenden, Herts AL5 2JQ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1007/s00705-004-0318-7. RX PUBMED; 15290374. RA Kanyuka K., McGrann G., Alhudaib K., Hariri D., Adams M.J.; RT "Biological and sequence analysis of a novel European isolate of Barley RT mild mosaic virus that overcomes the barley rym5 resistance gene"; RL Arch. Virol. 149(8):1469-1480(2004). XX DR MD5; 50678b19acd66b53b75ea511a88c031f. XX FH Key Location/Qualifiers FH FT source 1..3380 FT /organism="Barley mild mosaic virus" FT /segment="RNA2" FT /host="Barley" FT /isolate="F-SIL" FT /mol_type="genomic RNA" FT /country="France:Marne - Sillery" FT /clone="2-2" FT /note="rym5 resistance-breaking" FT /db_xref="taxon:12466" FT CDS 2..2683 FT /product="polyprotein" FT /db_xref="GOA:Q68VH3" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q68VH3" FT /protein_id="CAD66664.1" FT /translation="MMMNSTIRQGWQQVLRRFSIPTSGDRLIVSNSTDQPIGLFGAFDT FT SLQTLSQVTNDPEVLKQKSNIPTHLDVASVLEASPRSFPWVFLTNSFCTFGGSIHAQNL FT QAFATAEFKSGFCYMNLLIPLSFDIIDAHADSFRGFVEQLPDTLGAYPSLSMVLNVMLH FT AATRFPEIVASPIPTIAFDAGSLQFHVTDKRGVPGMWNILKACRVYELLSLAAGDIGCE FT YMLYPVGAAPQYSFWKKSMDHFTSDRFVEFLAMQDLLASALEQDYATHDARDALLSALQ FT NAGYTNVVARERRFPNGHDPSIVWLNLSEAPISEKLTELKRYLLVGHRSDDTADITHNV FT HQHVFEVLKTMSVQFSKTTNAYNRARFEVNHKVIWNAEYGRGPQQNAELEALVLFLNRQ FT SLEIENILHRTTSPVVVTSWKPDVPPAAPEIKEEEPTHAIATPITEAPAHVTPVEVVNL FT PPTRSYWAEALVGILTAILGTVFAFLTRALIRAKRLRRKSTFPWVTLNSGDDDDDQSGG FT GGGGPQTPGGQSPVPHTRGTHQSRFSVQDIASDTSLLSVDLDEDTLSQYDETFQKIRRA FT LFETSFADILQNSARWISTLEAMALADGNAPYTLLAQYLNGIEEAYTNFRNTGHISRAT FT LSGFFALEDNLRAAGIAFGTTTPTQTIQNQFADSPARRWKTRFEQIACELGDASIKSLA FT DLADIIDTERERGDLTQFDVLAASSISSLCRAVRIISDTTDPNAQLALVENATAMQNNI FT NAILGTNVSIPFLSATHRLLTTRRVQEAGAESRSGATPETVQQLADAELAKIVSEANMY FT NEMAASQRDIANATREATIREHVLSPVNALANVGMAAAFFRSGGLRSRAFNPAMPTMPG FT GPAAAGRPMFQAFRGRGHRLNR" FT mat_peptide 2..788 FT /product="P1 protein" FT mat_peptide 789..2680 FT /product="P2 protein" FT 3'UTR 2684..3380 XX SQ Sequence 3380 BP; 833 A; 984 C; 784 G; 779 T; 0 other; gatgatgatg aactctacga ttcgccaagg atggcagcag gtgctgaggc gcttttccat 60 cccaacatcc ggagatagac tcatcgtttc caactccacc gaccaaccca tcggcctttt 120 cggggcgttc gacacatcgc tgcaaacact ctcacaagtc accaatgatc ctgaggtctt 180 gaagcagaag tccaacatcc ccacgcacct ggacgtggcc tccgtgcttg aagcaagccc 240 acggtccttc ccatgggttt ttctcacgaa ctcattctgc accttcggtg gttcgataca 300 tgctcagaat cttcaagcct tcgcaactgc cgagtttaag agcgggttct gttacatgaa 360 cctgctaata ccactcagct ttgatatcat cgatgcacac gcagattctt ttcgcggctt 420 tgttgaacaa cttcctgaca cgttaggcgc ctacccttca ctcagcatgg tgctaaacgt 480 catgttacac gcagccacgc gtttccccga gatcgtcgcc tcccctatcc caaccatagc 540 atttgacgcc ggatcattgc agttccatgt tactgataaa cggggcgtcc caggcatgtg 600 gaacatactc aaagcctgcc gtgtgtacga gcttctttcg cttgcagcag gtgatatagg 660 ttgcgagtac atgctgtacc ctgttggtgc tgcaccccaa tactccttct ggaagaaatc 720 catggaccat ttcacatccg accggttcgt ggaattccta gccatgcagg atctgctcgc 780 cagtgcactt gaacaagatt atgcaacgca cgacgcgcgc gatgcactac tttcagctct 840 ccagaacgca ggttacacaa acgttgttgc aagggagagg aggtttccaa atggccacga 900 ccctagcatt gtctggttga acctgagcga agcccccatt tcagagaagc taactgaact 960 taaacggtac ctcctagtcg gacataggag cgacgacact gctgatatca cacacaacgt 1020 gcaccagcac gtttttgaag tcctcaagac catgtctgtg cagtttagca agacaacgaa 1080 cgcctacaac cgtgcccgct ttgaagtcaa ccacaaagtc atatggaacg cagaatacgg 1140 acgcggccct caacagaacg ccgagctcga ggctcttgta ctctttctta ataggcaatc 1200 gcttgaaatt gagaacatct tgcacagaac aactagtcct gttgttgtca ccagctggaa 1260 acccgatgtt ccccctgctg cacctgaaat caaggaggag gaacccacgc acgcaatcgc 1320 aacaccaata actgaggcgc cagcacacgt cactcctgtt gaagttgtga acctgccacc 1380 gacgcgctcc tattgggctg aggcacttgt cggtatcctg actgcaatcc tgggaacggt 1440 attcgccttc ctcactcgag cactcattcg tgcaaagaga ttacggagga aatccacctt 1500 cccctgggtg acgctaaact ctggagatga cgatgatgac caatctgggg ggggaggagg 1560 tggcccgcaa acacctggcg ggcagtcccc agtcccgcac acgcgtggaa cgcaccagtc 1620 gcgcttctcc gtgcaggaca tagcatccga caccagtctg ctaagtgtcg atctcgacga 1680 agacacgctc tcccagtatg acgaaacctt ccaaaagatc cgccgtgcgc tcttcgaaac 1740 cagttttgca gacatcctgc aaaactctgc tcgttggatc tccacgctgg aagcgatggc 1800 tctcgcagat ggcaatgctc cttacacact tcttgcgcag tacctcaacg ggattgagga 1860 ggcgtacacg aactttcgca acacaggtca catctcccgc gcaacacttt caggcttctt 1920 cgctttggaa gataatctgc gtgcagctgg catagctttt gggaccacaa cacccacgca 1980 aaccatacag aaccaatttg ctgactcccc agcccgtcga tggaaaacac gatttgaaca 2040 gattgcatgt gaactgggcg atgctagcat caaatcgctt gcagatcttg cagacatcat 2100 cgacactgag cgggagaggg gcgacttgac tcagtttgat gttctcgcag cctcttccat 2160 tagcagcctc tgtcgtgctg tgcgcatcat cagtgacacc accgatccaa atgctcaatt 2220 agcccttgtt gaaaacgcaa cggctatgca gaacaacatc aatgccatcc tgggcacgaa 2280 cgttagcata cccttcctca gtgccacgca tcgtttactc accacacgcc gtgttcaaga 2340 agccggggcg gagagccgct ctggagcaac gcctgaaacc gttcagcaac tggctgacgc 2400 agagctggca aaaattgtga gcgaggcaaa catgtacaat gagatggccg ccagccaaag 2460 ggacatcgcc aatgcaacac gcgaagccac catccgtgag catgtgctca gccccgtcaa 2520 cgctttggca aatgttggca tggctgctgc gttcttccga tccggtggtt tgcgctcaag 2580 ggccttcaac cccgcaatgc caacaatgcc cggtggtcct gctgctgcgg ggcggccaat 2640 gttccaagcc ttcaggggac gagggcatcg tcttaatagg taggcatcag aactctgtgc 2700 tctggcacag cactgaacga gtgacacgcg ctcgttgtga agatccaatt ccacgcccag 2760 cgtgccactg aacaaacgaa acacgtttgt tgtgataatt aattaatttt tgcgcagact 2820 ttgtctgtgt tttctagagt gtgctgctct gcagctgcat tggagggttt cacgggaacg 2880 acatcatcac accccatccg caaaccgcct gcattcacat ctttgtgcca ctttaaatac 2940 tcatacgcat aggcaagtgc ctttctggca gagcatcccc gagcatcgac attcacgcga 3000 ttgcaatcaa ctggcttaat ccccggtttt gcaatcaata gtgagttcta cctctggacg 3060 tgttcccctg gaactgcaat cctcgttatg ttgtcgctga ttactatcag ctcgtaaacc 3120 acgatatcca cccacaatta gctactcgtg tactaacagt accggacacg cctatcctgc 3180 acttaagcct gcaggacgct accaggtccg cctactgtta ccatttgtgt agtttgttgt 3240 ggctccacct catatctaaa ttcagtacct gcatacaaaa cgtcatgcat ccctgttcaa 3300 catgaacacg gtttgggaag aagcaagtca tcatagactg ctggcattgt taggttgaca 3360 atgcttatgt acacaggaac 3380 //