ID AJ544270; SV 1; linear; genomic RNA; STD; VRL; 3518 BP. XX AC AJ544270; XX DT 13-AUG-2004 (Rel. 80, Created) DT 13-AUG-2004 (Rel. 80, Last updated, Version 1) XX DE Barley mild mosaic virus gene for polyprotein, clone 2, genomic RNA XX KW P1 protein; P2 protein; polyprotein. XX OS Barley mild mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3518 RA Adams M.J.; RT ; RL Submitted (14-FEB-2003) to the INSDC. RL Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research, RL Harpenden, Herts AL5 2JQ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1007/s00705-004-0318-7. RX PUBMED; 15290374. RA Kanyuka K., McGrann G., Alhudaib K., Hariri D., Adams M.J.; RT "Biological and sequence analysis of a novel European isolate of Barley RT mild mosaic virus that overcomes the barley rym5 resistance gene"; RL Arch. Virol. 149(8):1469-1480(2004). XX DR MD5; 0e8f413d05fbe7345eb6b8a2b7539d6c. XX FH Key Location/Qualifiers FH FT source 1..3518 FT /organism="Barley mild mosaic virus" FT /segment="RNA2" FT /host="Barley" FT /isolate="UK-L" FT /mol_type="genomic RNA" FT /country="United Kingdom:Lincolnshire - Rothwell" FT /clone="2" FT /db_xref="taxon:12466" FT 5'UTR 1..142 FT CDS 143..2827 FT /product="polyprotein" FT /db_xref="GOA:Q68VH5" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q68VH5" FT /protein_id="CAD66662.1" FT /translation="MMMNSTIRQGWQQVLRRFSIPATGDRLIVSNSTDQPIGLFGAFDT FT SLQTLSQVTNDPEILKQKSNIPTHLDVASVLETSPRSFPWVFLTNSFCTFGGSIHAQNL FT QAFATAEFKSGFCYMNLLIPLSFDIIDAHADSFRSFVEQLPDTLGAYPSLSMVLNVMLH FT AATRFPEIVASPVPTIAFDAESLQFHVTDKRGVPGMWNILKACRVYELLSLAADGIGCE FT YMLYPVGAAPQYSFWKKSMDHFISDRFVEFLAMQGLLASALEQDYKTHDARDALLTALQ FT SAGYTNVVARERRFPNGHDPSTVWLNLSEAPISEKLTELKRYLLVGHRSDEIADITHNA FT HQHVFEVLKTMSVQFSKTTNAYNRARFEVNHKVIWNAEYGRSSQQNAELEALVLFLNRQ FT SLEIENILRRTTSPVVVTNWQPDVPPAAPEISEGEPTHAVATPITEAPAHATPVEVVNL FT PPTRSYWAETLVGALTAILGTIFALLTRALIRAKRLRRKSTFPWVSLDSGDEDDDHSGG FT GGGSPQTPGGQPPASPAPGTHQSRFSVQDIASDTSLLSVDLDEDTLSQYDETFQTIRHA FT LFENSFADILQNSARWISTLGAMALADGNAPYTLLAQYLNGIEEAYTNFRNTGRISRAT FT LSGFFVLEDSLRAAGIAFGTTTPTQTIQNQFADSPARRWKTRFEQIACELGDASIKSLA FT DLADIIDTERERGDLTQFDVLAASSISSLCRAVRIISDTTDPNAQLALVENATAMQNNI FT NAILGTNVSIPFLSATRRLLITRRIQEAGAESRSGATPDTIQQLADAELAKIVSEANMF FT NEMAASQRDIANATREATIREHVLSPVNALANVGMAAAFFRSGGLRSRAFHPTMPTMPG FT SPAATGRPMFQAFRGRGHRLNRR" FT mat_peptide 143..829 FT /product="P1 protein" FT mat_peptide 830..2824 FT /product="P2 protein" FT 3'UTR 2828..3518 XX SQ Sequence 3518 BP; 910 A; 1000 C; 786 G; 822 T; 0 other; aaaaaataaa actacacaaa aacccaacga cttaaaacga tcacaatcaa acgagcaaac 60 acacaacaag caaacacaac agattgcagc gtacagttcc gaaacacgaa ctcatccact 120 gcagtcttgg aatccgatcg cgatgatgat gaactctacg attcgccaag gatggcagca 180 agtgctcaga cgcttttcca tcccagcaac cggagataga ctcatcgtct ccaattccac 240 tgatcagccc ataggtcttt tcggagcatt tgacacatca ctccaaacac tctcacaagt 300 caccaatgac cctgagattc tgaaacagaa gtccaacatc cccacgcatc tagacgtagc 360 atctgtgctc gaaaccagcc cccgatcttt tccgtgggtt ttcctcacaa actccttctg 420 cactttcggt ggctctatac acgctcagaa ccttcaagcc tttgcaaccg ccgagttcaa 480 gagtggattt tgttacatga acctgctgat accgcttagc ttcgacatca tcgatgcaca 540 cgctgattcc ttccgcagtt ttgtcgaaca actccctgac acgctgggtg cctatccctc 600 gctcagcatg gtgctaaacg tcatgctgca cgcagctacg cgcttcccag agattgttgc 660 ttcccctgtt ccaaccatag cattcgatgc tgaatcgctg caatttcatg taactgataa 720 acggggcgtc cctggcatgt ggaacatact caaggcctgc cgcgtatatg agctcctctc 780 gcttgctgca gacggcatag gctgcgaata catgctgtat cccgtcggcg ctgcgcccca 840 atactccttc tggaagaaat ccatggacca cttcatatct gaccggtttg tggaattctt 900 agccatgcag ggtttacttg ctagtgcact tgaacaggat tacaaaacac acgacgcacg 960 cgatgcatta ctcacagctc tacagagcgc aggttacacg aatgttgtcg caagagaacg 1020 gagatttcca aacggtcatg acccaagcac cgtctggttg aacctgagcg aggctcctat 1080 ttcagagaag ctaactgagc tcaaacgata cctcctggtt ggccacagaa gcgacgagat 1140 tgcggacatc acacataacg ctcaccagca cgtcttcgag gttctcaaaa ccatgtctgt 1200 ccagtttagc aagacaacca acgcttacaa ccgcgcccgt tttgaggtta accataaggt 1260 gatatggaat gcagagtacg gacgcagttc tcaacaaaac gctgagctcg aagcccttgt 1320 tctatttctc aatagacagt cgctagagat cgaaaacatt ctgcgcagaa caactagtcc 1380 cgtcgttgtg acgaactggc agcctgatgt tcctcccgca gcacctgaaa tcagcgaagg 1440 ggaaccaacg catgcagtcg caacgccaat aactgaggca ccagcacatg caactcctgt 1500 tgaagttgtg aacctgccac caacgcgctc ttattgggcc gaaacactcg ttggtgcgtt 1560 aactgcaatt ctgggaacca tcttcgcctt gctcactcgg gcgctcattc gcgcaaagag 1620 gctgcggaga aaatccacct ttccttgggt gtcactagac tctggagacg aagatgatga 1680 ccattctggt ggaggaggag gtagcccaca gacacctggc gggcagcccc cagcctcgcc 1740 agcacccgga acgcaccagt cgcgcttttc cgtgcaagat atagcatcgg acacgagcct 1800 actgagtgtg gaccttgatg aagacacact ctcccagtac gacgaaactt tccagacaat 1860 tcgtcatgcg ctctttgaga acagttttgc agacatcctg caaaactcag cccgctggat 1920 ctccacactg ggggcgatgg ctcttgcaga tggcaatgcc ccttacacgc tccttgcgca 1980 gtaccttaac ggaatcgagg aggcatacac aaactttcgc aacacagggc gtatctcccg 2040 tgcaacattg tcaggcttct tcgttctgga ggatagtctg cgtgcggctg gcatagcttt 2100 tgggaccaca acgcccacgc aaactataca aaaccagttt gctgactccc cagcccgtcg 2160 atggaaaaca cgctttgagc agatcgcatg cgaactgggc gatgctagca tcaaatcgct 2220 tgcagatctt gcagacatca tcgacactga gcgtgagaga ggagacttaa ctcagtttga 2280 tgttctcgca gcttcctcca taagcagtct ctgccgcgct gtccgtatta tcagtgacac 2340 aactgatcca aacgcacaac tagctcttgt cgagaacgca actgctatgc agaacaacat 2400 aaacgccatc ctaggcacga atgttagcat ccctttcctc agtgcaacgc gtcgcctgct 2460 cataacacgt cgcattcaag aagctggagc ggagagccgc tctggcgcaa cgccagacac 2520 catacagcag ctcgccgatg ctgagctagc gaaaattgtc agcgaggcaa acatgttcaa 2580 tgagatggct gctagtcaaa gagatattgc taatgcaaca cgtgaagcca ccattcgcga 2640 gcatgtactt agtcctgtta atgccttggc caatgttggc atggcggctg ctttcttccg 2700 atctggtggt ttgcgttcga gggctttcca tcccacaatg ccaacaatgc ccggtagtcc 2760 tgccgccaca gggcggccga tgtttcaagc ctttagagga cgagggcacc gtctcaatag 2820 acgttaaaac cctgtgcttt ggcacagcac tgaacaagcg acacgcgctt gttgtgataa 2880 ttgattccac gttcagcgtg ccactgaaca aacgacacac gtttgttgtg ataattaatt 2940 aatttttgcg cagactctgt ctgtgttttc tagagtgtgc tgctcggcag ctgcatcgga 3000 gggtttcacg ggaacgacat catcacaccc catccacaaa ccgcctgcat tcacatcttt 3060 gtgtcacttt aaatactcat acgcataggc aagtgccttt ccggcagagc atcccctggc 3120 atcgacactc acgcgatcgc aatcaactga cttaatcctc ggttttgcaa tcatatagtg 3180 agtcctaccc ctggacgtgt tcccctggaa ctgcaatcct cgttatgttg tcgctgatta 3240 ctatcagctc gtaaaccatg atatccaccc acaattagct attcgtgtac tagcatcatc 3300 ggatacgcct atcctgcact taagcctgca ggacgctatc aggtccgctg actgttacca 3360 tttgtgtagc tcgttgtggt tccgcctcat atctaaattc agtacctgca tacaaaacgt 3420 catgcatccc tgttcaacat gagcacgggt ttgggaagaa gcaagtcatc atagactgct 3480 ggcattgtta ggttgacaat gcttatgtac acaggaac 3518 //