ID   AJ512949; SV 1; circular; genomic DNA; STD; VRL; 1364 BP.
XX
AC   AJ512949;
XX
DT   25-JUN-2004 (Rel. 80, Created)
DT   25-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Nanovirus-like particle rep gene for replication associated protein, clone
DE   NOB-4
XX
KW   rep gene; replication associated protein.
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1364
RA   Briddon R.W.;
RT   ;
RL   Submitted (24-OCT-2002) to the INSDC.
RL   Briddon R.W., Dept. of Disease and Stress Biology, John Innes Centre, Coney
RL   Lane, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.03.041.
RX   PUBMED; 15207631.
RA   Briddon R.W., Bull S.E., Amin I., Mansoor S., Bedford I.D., Rishi N.,
RA   Siwatch S.S., Zafar Y., Abdel-Slalam A.M., Markham P.G.;
RT   "Diversity of DNA 1: a satellite-like molecule associated with monopartite
RT   begomovirus-DNA beta complexes";
RL   Virology 324(2):462-474(2004).
XX
DR   MD5; 56e0cd64b5c826fdbae7a8fdd8132840.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1364
FT                   /organism="Nanovirus-like particle"
FT                   /host="Ageratum conyzoides"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan"
FT                   /clone="NOB-4"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:96892"
FT   CDS             80..1027
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /function="involved in initiation of rolling circle
FT                   replication"
FT                   /db_xref="GOA:Q6HA20"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q6HA20"
FT                   /protein_id="CAD56262.1"
FT                   /translation="MPALKAQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGQRTLNQVKALFGDLKPHLEKQRARRTDEARDYCMKVETRVSGPFEF
FT                   GDYCPSGSHRRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAPEIQISNFKSW
FT                   QSRLKTLLERDPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLVVSNKYEPLMAPLLKCIHVVVMSNFLPDF
FT                   EKISVDRVHVIPCRPCGVCLKHHNIDNKCEDYID"
XX
SQ   Sequence 1364 BP; 409 A; 263 C; 322 G; 370 T; 0 other;
     accccgcctc gagaccccga gctagagacc tgtccgtaca tttcttcttt tctattatat        60
     tttagctgtc tgagtaaaca tgcctgccct caaagctcaa tggtggtgtt tcacagtttt       120
     cttcctgtcc gctacggctc ctgacctggt gcccctgttt gagaacactc acgttagcta       180
     cgcttgctgg caagaggaag agtctcccac gactcgacga cgccacctgc aaggctactt       240
     gcaactgaag ggtcagagga ccctgaacca ggtgaaagcc ctctttgggg atttgaagcc       300
     ccatcttgag aagcagcgag ctcgccgtac tgacgaagct cgcgattatt gtatgaaagt       360
     ggaaactagg gtttctggtc ctttcgaatt tggggattat tgccctagtg ggtcccacag       420
     acgccggcaa cgagaatctg taattcgatc tccggtgaga atggcagagg aaaatccgtc       480
     cgtcttccga cgagtcaagg caaagattgc tgaggaagaa ttccagaaga gcgcgcctga       540
     gattcaaatt tcgaatttta aatcttggca atcgcgccta aagacgctcc tggagaggga       600
     cccagatgac cgcactatct tctgggttta cggacctgat ggtggggaag gaaaatccac       660
     ttttgccaga gacctgtata gaagtgggtc ctggttctat acacgtggag gatctgcaga       720
     taatgtagct taccagtaca tagggtgttt aggaaataat attgtatttg atatccctcg       780
     tgataagaag gattatttac aatatagttt aattgagatg tttaaggata gattagtagt       840
     tagtaataag tatgagccgc ttatggcccc tctgcttaag tgtattcatg ttgtagttat       900
     gtctaatttt ctcccagact tcgagaagat tagtgtagat agagtccatg taatcccatg       960
     tagaccatgt ggtgtttgtc ttaaacacca taatattgat aataaatgtg aggattatat      1020
     tgactaaata attttgtttc ttgaagacaa gaaagaatga aatgaaaaaa ataatcaaaa      1080
     aaacatgagc cttatattat ttcaaaagaa aacagggccg cgcagcggcc caattgaaca      1140
     gaaactaaga tggaaataaa aaaatgggct tacaaaaacg acgatgtatt gaaaaagtgt      1200
     aaatgggacc aaaatgtaaa tatatgaaac ttgagtgctc gccaacaaaa gtaaatgaaa      1260
     gatgcggtta agcggagtaa actttatgaa actttagggg tatgcgttgc aattattgag      1320
     gtctctctgc tataaataac acgtcacgag gcgggtgtag tatt                       1364
//