ID   AJ270864; SV 1; linear; genomic DNA; STD; VRL; 707 BP.
XX
AC   AJ270864;
XX
DT   11-JUL-2000 (Rel. 64, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Cotton leaf curl virus DNA-A fragment, isolate P31-IR
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KW   AC1 gene; AC1 protein; AC4 gene; AC4 protein; AV1 gene; AV2 gene;
KW   AV2 protein; coat protein.
XX
OS   Cotton leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-707
RA   Sanz A.I.;
RT   ;
RL   Submitted (25-OCT-1999) to the INSDC.
RL   Sanz A.I., Departamento de Biotecnologia, E.T.S Ingenieros Agronomos.
RL   Universidad Politecnica., Avd. de la Complutense. Madrid, E-28040, SPAIN.
XX
RN   [3]
RX   PUBMED; 10859391.
RA   Sanz A.I., Fraile A., Garcia-Arenal F., Zhou X., Robinson D.J., Khalid S.,
RA   Butt T., Harrison B.D.;
RT   "Multiple infection, recombination and genome relationships among
RT   begomovirus isolates found in cotton and other plants in Pakistan";
RL   J. Gen. Virol. 81(Pt 7):1839-1849(2000).
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DR   MD5; 16e30cee914339f6ee61c2be023b6955.
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FH   Key             Location/Qualifiers
FH
FT   source          1..707
FT                   /organism="Cotton leaf curl virus"
FT                   /segment="A"
FT                   /isolate="P31-IR"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan"
FT                   /db_xref="taxon:53010"
FT   CDS             complement(<1..258)
FT                   /gene="AC1"
FT                   /product="AC1 protein"
FT                   /function="Replication assotiated protein"
FT                   /db_xref="GOA:Q9IEU2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IEU2"
FT                   /protein_id="CAB97108.1"
FT                   /translation="MAAPNRFKINAKNYFLTYPKCPLTKEEALSQILNLQTPTSKKFIR
FT                   ICRELHEDGTPHLHVLIQFEGKFQCRNNRFFDLSSPTRSAH"
FT   CDS             complement(<1..101)
FT                   /gene="AC4"
FT                   /product="AC4 protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IEU1"
FT                   /protein_id="CAB97109.1"
FT                   /translation="MGLLTCMFSSSSKESSSAGTIDSSTSAPQPGQH"
FT   rep_origin      411
FT   CDS             527..>707
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /db_xref="GOA:Q9IEU0"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IEU0"
FT                   /protein_id="CAB97110.1"
FT                   /translation="MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTIGYDLIRDL
FT                   ISILDSRNYVEASCR"
FT   CDS             687..>707
FT                   /gene="AV1"
FT                   /product="Coat Protein"
FT                   /function="coat protein"
FT                   /protein_id="CAB97111.1"
FT                   /translation="MSKRPAD"
XX
SQ   Sequence 707 BP; 184 A; 133 C; 161 G; 229 T; 0 other;
     atgtgctgac ctggttgggg agctgaggtc gaagaatcta ttgttcctgc actggaactt        60
     tccttcgaac tggatgagaa catgcaagtg aggagtccca tcttcatgaa gctctctgca       120
     gattctaatg aatttttttg aagtgggggt ttggagattt aagatttggg aaagtgcttc       180
     ttctttagtg agggggcact tgggataagt gagaaaataa tttttggcat ttattttaaa       240
     ccgattgggg gctgccatgt tgacttagtc aatcggtgtc tctcaactct ctctatgtat       300
     cggtgtattg gagtcctata tatatggaga ctctaatggc ataaatgtaa atatataact       360
     ttaatttgaa attcaaacga aaaggttaaa gcggccatcc gtctaatatt accggatggc       420
     cgcgcgattt tttttgtggg cccccgattt atgagattgc tccctcaaag ctaaataacg       480
     ctcccgccca ctataagtac ttgcgcacta agtttcaaat tcaaacatgt gggatccatt       540
     gttaaacgag ttccccgaga cggttcacgg gtttcgttgc atgcttgcta tcaaatatct       600
     tcaacaactg tctgaggaat actctcctga tacgattggg tacgatttaa ttcgcgatct       660
     aatttctatt ttagattcta ggaattatgt cgaagcgtcc tgccgat                     707
//