ID   AJ245500; SV 1; linear; genomic DNA; STD; VRL; 753 BP.
XX
AC   AJ245500;
XX
DT   11-JUL-2000 (Rel. 64, Created)
DT   08-SEP-2004 (Rel. 81, Last updated, Version 2)
XX
DE   Cotton leaf curl virus av2 (partial) and av1 (partial) genes, isolate p29
XX
KW   AV1 gene; AV2 gene; AV2 protein; coat protein.
XX
OS   Cotton leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-753
RA   Sanz A.I.;
RT   ;
RL   Submitted (02-AUG-1999) to the INSDC.
RL   Sanz A.I., Departamento de Biotecnologia, E.T.S. Ingenieros Agronomos.
RL   Universidad Politecnica., Avd de la Complutense, Madrid, 28040, SPAIN.
XX
RN   [3]
RX   PUBMED; 10859391.
RA   Sanz A.I., Fraile A., Garcia-Arenal F., Zhou X., Robinson D.J., Khalid S.,
RA   Butt T., Harrison B.D.;
RT   "Multiple infection, recombination and genome relationships among
RT   begomovirus isolates found in cotton and other plants in Pakistan";
RL   J. Gen. Virol. 81(Pt 7):1839-1849(2000).
XX
DR   MD5; 32b963664172b3202a7e092a82aa3555.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..753
FT                   /organism="Cotton leaf curl virus"
FT                   /isolate="p29"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan"
FT                   /clone="12"
FT                   /db_xref="taxon:53010"
FT   CDS             <1..264
FT                   /codon_start=1
FT                   /gene="av2"
FT                   /product="AV2 protein"
FT                   /db_xref="GOA:Q9IEX9"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IEX9"
FT                   /protein_id="CAB97060.1"
FT                   /translation="DTLGYELIRDLICILRSRNYVEASCRYRHFYARVESTPASELRQP
FT                   IHQPCCCPHCPRHKTTGMDKQAYEQETQNVPDVQKSGCSKGM"
FT   CDS             59..>753
FT                   /gene="av1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9IEX8"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IEX8"
FT                   /protein_id="CAB97061.1"
FT                   /translation="MSKRAADIAISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT                   IGKRFCVKSVYVLGQIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMA"
XX
SQ   Sequence 753 BP; 207 A; 153 C; 197 G; 196 T; 0 other;
     gatacccttg gttacgagtt aatacgtgat ttaatctgta ttctacgctc ccgtaattat        60
     gtcgaagcga gctgccgata tcgccatttc tacgcccgcg tcgaaagtac gccggcgtct       120
     gaacttcggc agcccataca ccagccgtgc tgctgccccc attgtccgcg tcacaaaaca       180
     acaggcatgg acaaacaggc ctatgaacag gaaacccaga atgtaccgga tgtacagaag       240
     tccggatgtt ccaaggggat gtgagggtcc ctgtaaggta cagtcatttg aatctcgaca       300
     cgatgtcgtt catattggta aggtaatgtg tatttcggat gttacgcgtg gagtcggttt       360
     gacccatcgt ataggtaagc gtttttgtgt caagtcagtt tatgttttag gtcagatatg       420
     gatggacgag aacatcaaga ccaagaacca tacgaattcg gtgatgtttt tccttgttcg       480
     tgatcgacga ccggtagata aaccccagga ttttggtgag gtatttaaca tgtttgacaa       540
     cgaacccagt acggcgaccg tgaagaatag tcatagggat cgttaccagg tgttgaggaa       600
     atggcatgca accgtcacgg gtggtcaata tgcgagtaag gaacaggcgt tggtcaagaa       660
     gtttgtcagg gttaacaatt atgttgttta caatcaacag gaagcaggaa aatacgagaa       720
     tcatacggag aatgcgttaa tgctttatat ggc                                    753
//