ID   AJ006461; SV 1; linear; genomic DNA; STD; VRL; 1645 BP.
XX
AC   AJ006461;
XX
DT   08-JUN-1998 (Rel. 56, Created)
DT   22-APR-2004 (Rel. 79, Last updated, Version 4)
XX
DE   East African cassava mosaic virus - [Malawi] AV1 gene, isolate YG
XX
KW   AV1 gene; coat protein.
XX
OS   East African cassava mosaic virus - [Malawi]
OC   Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes;
OC   Geplafuvirales; Geminiviridae; Begomovirus;
OC   East African cassava mosaic virus.
XX
RN   [1]
RP   1-1645
RX   PUBMED; 8245859.
RA   Hong Y., Robinson D.J., Harrison B.D.;
RT   "Nucleotide sequence evidence for the occurrence of three distinct
RT   whitefly-transmitted geminiviruses in cassava.";
RL   J. Gen. Virol. 74:2437-2443(1993).
XX
RN   [2]
RP   1-1645
RA   Robinson D.J.;
RT   ;
RL   Submitted (27-MAY-1998) to the INSDC.
RL   Robinson D. J., Scottish Crop Research Institute, Virology, Invergowrie,
RL   Dundee, DD2 5DA, UK
XX
DR   MD5; 04e7e61cd43461f70a15072157d995eb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1645
FT                   /organism="East African cassava mosaic virus - [Malawi]"
FT                   /chromosome="DNA-A"
FT                   /segment="A"
FT                   /strain="Malawi strain"
FT                   /isolate="YG"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:268967"
FT   misc_feature    323..547
FT                   /note="intergenic region"
FT   CDS             795..>1545
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:O72887"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:O72887"
FT                   /protein_id="CAA07048.1"
FT                   /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKLWT
FT                   NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVARGSGITHR
FT                   VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE
FT                   PSTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN
FT                   HTENALLLYMACTHASNPVYATLKIRIY"
XX
SQ   Sequence 1645 BP; 448 A; 307 C; 423 G; 467 T; 0 other;
     tattgtacca tgtaggactt gacgtcggag ctggatttag ctccttgaat gttcggatgg        60
     aaatgtgttg atcgtgttgg ggataccagg tcgaagaatc gcttatttgt gcatgagaat       120
     ttgccttcga actgaataag catgtggaga tgaggttgcc gatcgtcgtg aagttctctg       180
     cacactttga tgtatttctt gtttgtggga gtggggatgt ttaatatttg ggataatgcg       240
     tcgtgtttag atagagaaca tttgggatat gtgagaaaat agtttttggc ctgtatttta       300
     aaacgcttgg ggggagtcat ttatgcgagc gaattggaga cacctcggtt gatgtcctct       360
     actgaattgg agacaatata tagttgtctc caaatggcat aatggtaatt atgtagatct       420
     attttcaaaa tttgaaccaa aagcggccat ccgtataata ttaccggatg gccgcgcccg       480
     aaaaagaagg tggaccccac taggatggcc gcgcccgtga aagaaatgtg gtccccgcgc       540
     acttgtttcg gtcagccagt catattcacg cgtggaagtc tagatatttg ttgtttgtct       600
     ttatagactt cgtcgcgaag tagtggagcg cgtcaacatg tgggatccat tgttaaacga       660
     tttccctgaa accgttcacg ttcgttccat gcttgctgtt aaatacctgt tacatcttga       720
     acaggaatac gaccgcggaa ctgtcggggc cgagtatata cgggatctaa taggggttct       780
     acggtgtaag agttatgtcg aagcgaccag gagatataat aatctcaaca cccgtatcca       840
     aggtccggag gaggctgaac ttcgacagcc catacacgaa ccgtgttgtt gcccccactg       900
     tccgcgtcac cagaagcaaa ctatggacca acaggcccat gtaccggaag cccaagatgt       960
     acagaatgta tcgaagccca gatgtcccta agggctgtga aggcccatgt aaggttcagt      1020
     cttatgaaca gagggatgat gttaagcaca ctggtatggt ccgatgtgtc agtgatgttg      1080
     ctcgtgggtc aggcattacc catagagtcg ggaagaggtt ctgtgtgaag tccatatata      1140
     tattgggcaa gatctggatg gatgagaata tcaagaagca aaaccatacg aaccatgtta      1200
     tgttctttct cgtccgagat agaaggcctt atgggccgag tcctcaagat tttggacaag      1260
     tgttcaacat gttcgataat gaaccatcga ctgcaacggt gaagaatgat cttagggacc      1320
     ggtatcaggt gttacgtaaa ttctatgcga ctgttgttgg tggaccctcg gggatgaagg      1380
     aacaagctct ggttaagagg ttttttagga tcaataatca tgtagtgtat aatcatcaag      1440
     aacaggccaa gtatgagaat catactgaga atgcgttgtt attgtatatg gcgtgtacac      1500
     atgcctcaaa tcctgtgtat gctactctga aaatacgcat ctatttctat gatgcagtga      1560
     caaattaata aaggttgaat tttattgcat gttgctccgt aacttggagc gtgtttagta      1620
     atacatcata caatacatga tcaac                                            1645
//