ID AF235033; SV 1; linear; genomic RNA; STD; VRL; 3373 BP. XX AC AF235033; XX DT 09-MAR-2001 (Rel. 67, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 4) XX DE American plum line pattern virus RNA 1 putative viral replicase p1 gene, DE complete cds. XX KW . XX OS American plum line pattern virus OC Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; OC Bromoviridae; Ilarvirus. XX RN [1] RP 1-3373 RA Scott S.W., Zimmerman M.T.; RT "American plum line pattern virus is a distinct ilarvirus"; RL Acta Hortic. 550:221-225(2001). XX RN [2] RP 1-3373 RA Zimmerman M.T., Scott S.W.; RT ; RL Submitted (16-FEB-2000) to the INSDC. RL Plant Pathology and Physiology, Clemson University, P.O. Box 340377, RL Clemson, SC 29634-0377, USA XX DR MD5; 194704a1d0a62c079d65afa927afca32. XX FH Key Location/Qualifiers FH FT source 1..3373 FT /organism="American plum line pattern virus" FT /segment="RNA1" FT /mol_type="genomic RNA" FT /db_xref="taxon:134632" FT CDS 22..3210 FT /codon_start=1 FT /product="putative viral replicase p1" FT /db_xref="GOA:Q997A4" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q997A4" FT /protein_id="AAK15026.1" FT /translation="MTCDAQTTEISELLDAVLKARCADESSTVGKVFADYAAQKVRNSL FT GDSKVRRPLTVSFQLTPDQQALLRHNFPGREIRFSSSAPSSHSFAAAHRILETDFLYDC FT LSSEAPVIDLGGNFSTHLKNKRHNVHCCCPLLDYRDGARHTERIYSWDKYSKHNRGYDR FT TLVLSEYVSRVYRSADYAMAVHSTSDIPLVELCSALRCHGVRKFVCTMMMTPEMLFQSS FT GYIPHFEVRWTVDKKADRIFFDFENAPNLGMTILHSDQLFPGELCRPGRSRLSCGKTQD FT GGVVVIDITYVDGYYWGLSLEGGRSCAWFSRIRDKVLVNTVSDFDPYSNDVVRKEVLMD FT REVLTRVVEAAFRQYKPTTAMETAVQSIAMLLSSSTNHVIVNGVTMIAGTPLEIYEYVP FT VAVAVYKHVRHYYNMVSTIFDLINSEVQVKTSVPRFDSSAVPTVDMWGDAAMIEGAMEE FT VEISPSFIGSLFREQLISESDYERVVRLPGVSLKRWWEEFRAKHLGTKRSFLRIFSDPE FT FCIPFYDYVVANHGSFLQIFKQKDVEMGDLAKERKQSRELLRKSIREEEERKEAEERRL FT SKAVIRIAQWLEAHPNGKIPSGLGDIKDFLPVIHAKSEVNEGVKEGVVLNPYAENITEA FT IEYLDSVFTIQRRTMDSIINHCEGGRVISPAVFAGFEDLRIFKPSSNRWYAPSGKLPQA FT EEQYSFGYVVGGDRVTIHWAGGEFSVDTRKALSVYSAVFFDKSCVVDTSGPIRESLRGA FT LTRDTNVEITLIDGVAGCGKTTKIVKSADIDREGGCLILTSNRNSAEELRSKVRGSQLV FT KSRVIRTVDSYLMAKNPPTADVVYFDECFLQHSGVILAAVTLAKAKKLYAFGDTEQIPF FT ISRNPLFRFKHRFLTSNRRIECLDTFRSPADATFLLGKYFYKKKSQIKTTSRVQPSISV FT KPISVHDQIEVDKSAIYCCYIQAEKAELLSKPQFKNMEVATIHEKQGESVDKVIFFRLS FT KTSTELTTGKHPVMGPCHALVALSRHKKEFVYYTRAATVDTSDCLYKACMDVPETKELY FT EVFTPSERSSLVLD" XX SQ Sequence 3373 BP; 878 A; 658 C; 853 G; 984 T; 0 other; gtctttttgt ccaaagttat tatgacttgt gatgcacaaa ctaccgaaat ttccgagctt 60 ttagatgcag ttctaaaagc tcgatgcgcc gacgaatcgt ctaccgtcgg taaggttttt 120 gctgattatg cagcgcaaaa agtccggaat tccttggggg attctaaggt taggagacct 180 ttgactgtct cgtttcagtt gacccccgac cagcaagctt tgttacggca caactttcct 240 ggtcgggaga ttcgattcag ttcttcggct ccttcgtccc acagctttgc agcagctcac 300 aggattctgg aaacagattt tttgtatgac tgtttgagca gtgaagcccc cgttattgat 360 ttggggggaa atttttcaac acatttgaaa aacaagcgac acaacgttca ttgttgttgt 420 cccttgcttg actatcgtga tggtgctaga cacaccgaac gaatatattc ttgggataaa 480 tattccaaac ataaccgggg atatgacaga accctggtat tgtcggaata cgtttcaaga 540 gtgtaccgta gtgctgatta tgctatggca gtacactcta cgtccgacat tccgttagtg 600 gaactttgtt ccgcattacg atgccatggt gttagaaaat tcgtttgcac catgatgatg 660 accccagaga tgttgttcca atcttcgggt tatatacctc actttgaagt gagatggacc 720 gtcgataaga aggcggatcg aattttcttc gattttgaaa atgcacccaa tttaggtatg 780 accattctcc actctgatca gttatttcca ggcgaattgt gtcgacctgg gagatcacgc 840 ttatcgtgtg gaaagaccca agatgggggc gttgtagtaa ttgacatcac gtatgtggat 900 ggttactact ggggtttgag tttggaagga ggtcgttcat gtgcatggtt ctctaggatt 960 agagataaag tgcttgtgaa cactgtttcc gactttgacc cttattctaa cgatgtggtt 1020 aggaaggagg tgttgatgga cagggaagtt ttaactaggg ttgtggaagc cgcttttagg 1080 cagtacaaac ctactacagc tatggagact gcagtgcagt ctatagctat gcttctgtcg 1140 tcttcgacca atcacgttat cgttaacgga gttacgatga ttgcgggtac tcctcttgaa 1200 atttatgagt atgtgcccgt tgccgtagct gtgtataagc atgttcgtca ctactacaat 1260 atggtgtcga cgatattcga cctgatcaat tctgaagttc aggttaagac tagtgttcct 1320 aggtttgatt catccgcggt accgactgtg gatatgtggg gtgatgctgc aatgatcgag 1380 ggagcgatgg aggaggtgga aatttcccct tcatttatcg gttccctttt ccgtgagcag 1440 ctcatctcag agtctgatta cgaacgcgtc gtcagattac caggcgtgag cctgaagcga 1500 tggtgggagg aattcagagc gaaacatctt ggaacgaaac gctctttcct ccgcattttt 1560 tcggatcccg aattctgtat acccttctat gattatgtcg tggctaatca tggaagtttc 1620 ttgcaaatct tcaaacagaa ggatgttgaa atgggagatt tagcaaagga aaggaaacag 1680 agtagggagt tactccgtaa atctatccgt gaggaggagg agcggaagga ggccgaggaa 1740 cggaggttga gtaaggccgt gatccgtatc gcgcaatggt tagaagcaca tccaaatggg 1800 aaaattccta gtggattggg cgatattaag gattttcttc ccgttattca tgcgaaatcg 1860 gaagttaatg agggggtgaa ggaaggtgtc gtcctaaacc cctatgcaga aaatataacg 1920 gaagccatcg aatacttgga cagtgttttt actatccaaa ggcggacgat ggactctatc 1980 ataaaccatt gtgaaggtgg tagagtcatt tcaccagcgg tgtttgcagg gtttgaagat 2040 ctgcgtatct tcaaaccctc cagtaatcga tggtatgctc cttctggaaa gttgccgcaa 2100 gccgaggaac agtatagttt cggttatgtg gttggtggtg atagagtcac cattcactgg 2160 gctggtggtg agttctccgt agacacgcgg aaagcgttga gtgtgtactc agcggtgttt 2220 ttcgacaaat catgtgttgt ggacacatca ggtcccattc gagagtcttt gcgaggtgct 2280 ttgactcgag acacgaacgt cgaaattact ctcatcgatg gtgtggcagg ttgtgggaaa 2340 acaacaaaaa ttgtgaaatc tgccgacatt gacagagaag ggggttgttt aatcctgacc 2400 tctaatagga attcggctga ggagctaaga tccaaggttc gtggttctca attagtgaaa 2460 tcgcgagtga ttcgcaccgt tgattcctac ttgatggcga agaatccacc tactgcggat 2520 gtggtatact tcgatgagtg ttttttacaa cactccggag taattctcgc ggcggttacg 2580 ttggcgaaag caaagaaact ttatgctttt ggtgatactg aacagattcc gtttatttct 2640 cggaatcctt tgttcagatt taagcatcgg tttttgacgt ccaaccgaag aatagagtgt 2700 ctggatacat tcagatctcc ggcagatgcg acgtttctat tggggaaata tttctacaag 2760 aagaaatccc aaataaagac tacgtctagg gttcagccga gtatatcggt taaaccgatt 2820 tccgtccacg atcaaattga ggtggacaag tcagcgattt attgctgtta cattcaagcc 2880 gagaaggcag aacttttgag taagccccag ttcaagaaca tggaggttgc tactatccac 2940 gagaaacaag gagaatctgt ggataaagtt attttctttc gtttaagtaa aacttcgacg 3000 gaattaacca cgggaaaaca tccagtgatg ggtccttgtc atgctcttgt tgcgttgtca 3060 cgccacaaga aagaattcgt gtattataca cgagcggcga ctgtcgatac aagtgattgt 3120 ttatacaaag cttgtatgga cgtacctgaa actaaggaac tctatgaggt tttcacccct 3180 tctgagagat ccagtttggt tttggattga tgttactagt cgtttagact aatgaaaatc 3240 ccaattgggt cattgacttt gtcaatgagt taactacgat gtcggcccta ggacatctat 3300 cgagttaacg acgatcgctt tgcgattatg cttcattttt cctttcggaa aaatgaaatg 3360 acccttaggg gcc 3373 //