ID   AF138298; SV 1; linear; genomic DNA; STD; VRL; 1557 BP.
XX
AC   AF138298;
XX
DT   01-JUN-1999 (Rel. 59, Created)
DT   19-APR-2006 (Rel. 87, Last updated, Version 2)
XX
DE   Tomato golden mottle virus-[GT94-R2] segment DNA-B BC1 protein (bc1) and
DE   BV1 protein (bv1) genes, partial cds.
XX
KW   .
XX
OS   Tomato golden mottle virus-[GT94-R2]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1557
RA   Nakhla M.K., Mejia L., Ramirez P., Karkashian J.P., Doyle M.M.,
RA   Maxwell D.P.;
RT   "Molecular characterization and DNA-based detection methods for
RT   vegetable-associated geminiviruses in Central America";
RL   Unpublished.
XX
RN   [2]
RP   1-1557
RA   Nakhla M.K., Kamal S., Maxwell D.P.;
RT   ;
RL   Submitted (26-MAR-1999) to the INSDC.
RL   Plant Pathology, Univ. of Wisconsin-Madison, 1630 Linden Dr., Madison, WI
RL   53706-1598, USA
XX
DR   MD5; 7f2e8756975c00110502e34b4d0415dd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1557
FT                   /organism="Tomato golden mottle virus-[GT94-R2]"
FT                   /segment="DNA-B"
FT                   /host="tomato"
FT                   /isolate="GT94-R2"
FT                   /mol_type="genomic DNA"
FT                   /country="Guatemala:Laguna de Retana"
FT                   /collected_by="L. Mejia and D.P. Maxwell"
FT                   /collection_date="May-1994"
FT                   /clone="pTGTB2"
FT                   /db_xref="taxon:223343"
FT   gene            complement(<1..466)
FT                   /gene="bc1"
FT   CDS             complement(<1..466)
FT                   /codon_start=1
FT                   /gene="bc1"
FT                   /product="BC1 protein"
FT                   /function="mediates viral DNA transport through
FT                   plasmodesmata"
FT                   /note="movement protein"
FT                   /db_xref="GOA:Q9WHX5"
FT                   /db_xref="InterPro:IPR000211"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WHX5"
FT                   /protein_id="AAD33753.1"
FT                   /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTAR
FT                   LSRSCMKIDHCVIEYRQQVPINTTGTVIVEIHDKRMTDNESLQSSWTFPIRCNIDLHYF
FT                   FASIFSLKDPIPWKLVFRVCDTNVHQRTYFAKFKGKLKLSTGKHSVDIPFR"
FT   rep_origin      670..817
FT   gene            1297..>1557
FT                   /gene="bv1"
FT   CDS             1297..>1557
FT                   /codon_start=1
FT                   /gene="bv1"
FT                   /product="BV1 protein"
FT                   /function="exports viral DNA out of the nucleus"
FT                   /note="movement protein"
FT                   /db_xref="GOA:Q9WHX6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR001530"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WHX6"
FT                   /protein_id="AAD33754.1"
FT                   /translation="MYAIRHKRGSFFTQRHPYTRNNAVKRSSTVKRVNGKRHPTFVWKA
FT                   HDEPKMEAQRIREHQYGPDFVLAHNSAISTFISYPSLGKTQP"
XX
SQ   Sequence 1557 BP; 429 A; 288 C; 348 G; 492 T; 0 other;
     cccgaaaggg gatatccact gagtgtttcc ccgtcgagag cttcagtttc cctttgaact        60
     tcgcgaagta agtcctctgg tgcacatttg tatcacaaac tctgaatacg agtttccatg       120
     gaattgggtc cttcaaggag aagatcgatg cgaagaaata gtggagatct atgttgcatc       180
     tgatcggaaa agtccatgac gattgcagag attcgttgtc tgtcattctt ttgtcgtgga       240
     tctctactat cactgtaccc gtcgtgttta tcgggacctg ttgtctgtat tctatgacgc       300
     agtggtcgat tttcatgcag ctccggctaa gcctagctgt taattgtgat gccgttgacg       360
     gaaattgcag tattatctca gttaggtcat gagaaagttg gtactcgtct cggtgagact       420
     ctatgtaatt gaatgcgtta ggaggattta ctaactgaga atccatatag caaaaattag       480
     accgcgcagc ggcacccttt gagaaaatta tatgtgagga agagatgaac aggcagctaa       540
     tgaagaacta attcaagaag aattgtgttt ccggtataaa tatatatagg tctatttata       600
     aatgtgtgtg tttaatttag acgatgagtg tttgtcccag atttctagtg agagaatttc       660
     cgttagtggc atatttgtaa ttaaagggtg tactccaatt gagctcctct caaacttgct       720
     gaatgaattg gagtattgga gtacaattta tactaaaacc tcagatagcg cttggagaca       780
     cgtggcggcc atccgtttat aatattaccg gatggccgcg cgatttttta cctacccggg       840
     cccataaaaa atgacccgcg caatttttta gtgtgacagc tgtatcgcac ttactagccc       900
     actttcgtgg taccttcgtt tatatacgtg gcactgtgta tgatgacgct gagagttagt       960
     ggcacgtttt tctatatggg gaactttaat ttgaaatttg aataaatggc ccattgtatg      1020
     atggcgctga gagttagtgg cacgtctttc taggtgtgca actttaattt agaatttgac      1080
     agtggtatgt gtgtcgtttc accatcatgt actgactact gaaagacgtg gctaattata      1140
     agcgataacg atgagtctac ttaagatatg tgttttacaa aggacgtcta tataatggtg      1200
     ttgaaagatc gttatattca agtccaatga catagcgacc tcgtttatgt tatatcatat      1260
     atatattgtc tactgatata tcatctatta tgtaatatgt atgctattag gcataaacgt      1320
     gggtctttct ttactcaaag acacccttat acacgtaata acgcggtcaa gcgttcatca      1380
     actgttaaac gggttaatgg taaacgtcat cctacatttg tctggaaggc ccatgatgag      1440
     cccaaaatgg aggcccaacg gatccgtgaa catcagtatg gaccagattt cgtattggcc      1500
     cataattcag ccatatctac gtttatcagt tatccaagtt taggtaagac tcaaccc         1557
//