ID AF134484; SV 2; circular; genomic DNA; STD; VRL; 2744 BP. XX AC AF134484; XX DT 02-AUG-1999 (Rel. 60, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Pepper leaf curl virus, complete genome. XX KW . XX OS Pepper leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2744 RA Chiemsombat P., Warin N., Attathom S., Chatchawankarnpanich O.; RT ; RL Submitted (11-MAR-1999) to the INSDC. RL Plant Pathology, Kasetsart University, Malai-man, Kamphaengsaen, Nakorn RL Pathom 73140, Thailand XX RN [2] RC Sequence update by submitter RP 1-2744 RA Chiemsombat P., Warin N., Attathom S., Chatchawankarnpanich O.; RT ; RL Submitted (14-OCT-1999) to the INSDC. RL Plant Pathology, Kasetsart University, Malai-man, Kamphaengsaen, Nakorn RL Pathom 73140, Thailand XX DR MD5; 8337dbbc2f4eba3ad5bafbf7de733584. XX CC On Oct 14, 1999 this sequence version replaced gi:5669869. XX FH Key Location/Qualifiers FH FT source 1..2744 FT /organism="Pepper leaf curl virus" FT /mol_type="genomic DNA" FT /db_xref="taxon:83839" FT CDS 174..485 FT /codon_start=1 FT /product="AV2 precoat protein" FT /db_xref="GOA:Q9PY64" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9PY64" FT /protein_id="AAF02097.1" FT /translation="MVLRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEAS FT RRYSHFHSRLQGASPFELRQPICQPCCCPYCPRHKQKEVMGQPDHVQKAQDIQDVQKP" FT CDS 295..1065 FT /codon_start=1 FT /product="AV1 coat protein" FT /db_xref="GOA:Q9PY63" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9PY63" FT /protein_id="AAF02096.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSW FT ANRTMYRKPRIYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH FT RVGKGPVIKSVYVWGRIWMDEISSQESHQSVMFFLVRDRRPFGTPQDFGQVFNMYDNEP FT STATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNH FT TENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1062..1475) FT /codon_start=1 FT /product="AC3 protein" FT /db_xref="GOA:Q9PY62" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q9PY62" FT /protein_id="AAF02100.1" FT /translation="MDSRTGAHHTAAQAAQAENGVYIWTVNNPLYFRITQHHERPFLRN FT HDIITVQIQFNYNLRKAGGLHQCFLICQIWTRLHPQTSRFLRVFKYQCIKYLDHLGVIS FT INNVIRAIRHVLYNVLEGTIDARLSEMIKFNIY" FT CDS complement(1207..1620) FT /codon_start=1 FT /product="AC2 trap protein" FT /db_xref="GOA:Q9PY61" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q9PY61" FT /protein_id="AAF02099.1" FT /translation="MQSSSPSKAHSSQVPIKVRHRIAKKTTRRRRVDLPCGCSYFVALG FT CHPHGFTHRGTSHCSSSSSSREWRIYLDGQQSPIFQNNTTPREAVPEEPRHNHGANPVQ FT LQPEESGGTTPMLSNLPNLDSFTSSDLAFLKSI" FT CDS complement(1538..2602) FT /codon_start=1 FT /product="AC1 replicase-associated protein" FT /db_xref="GOA:Q9PY60" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9PY60" FT /protein_id="AAF02098.1" FT /translation="MAPPKNLRINAKNYFLTYPHCSLTKEEALSQIQAIETPTIKLFIR FT ICRELHEDGTPHLHILIQFEGKFQCKNPRFFDLTSPTRSAHFHPNIQGAKSSTDVKEYI FT AKNGDVLDHGVFQIDGRSARGGCQSANDAYAEALNSGTKASALAILKEEAPKDYILQFH FT NLNSNLDKIFSLRIEMYISPFLVSFDQVQRNLNEWVAANVVKPARPLRPISIVVEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYNNDPWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPVQIKGGIPTIFLCNPGPHSSYKEFLEEEKNTALKNWALKNAIFVTIEGPLFS FT GSHQGATQNRQEDN" FT CDS complement(2152..2445) FT /codon_start=1 FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q9PY59" FT /protein_id="AAF02101.1" FT /translation="MGLLTCISSSNSKVNSNAKIHDSSTSHPQPGQHISIRTFRELKAQ FT QMSKNISQKTETFLIMGFSRSMEDRLEGVANLPTTHMPRHSIQEPKLRHSQF" XX SQ Sequence 2744 BP; 723 A; 573 C; 622 G; 826 T; 0 other; accggatggc cgcgattttt tttcaagtgg tccccccgcg tgcgctggac caatcataac 60 catccctcaa agcttgcatg cctgcaggtt atcccatcaa aacgtggtcc ccaagtactt 120 acatcaaaac atgtgggatc ctttactaaa cgaagtttcc tgaaaaccgt aacatggttt 180 taaggtgtat gttagcaatt aagtatttgc aactagtaga gaatacatac tctcctgata 240 cattaggcta cgacctaata cgtgatctca tcttggttat tcgtgctagg gattatgtcg 300 aagcgtcccg cagatatagt catttccact cccgcctcca aggtgcgtcg ccgtttgaac 360 ttcgacagcc catatgtcag ccgtgctgct gcccctactg tcctcgtcac aaacaaaagg 420 aggtcatggg ccaaccggac catgtacaga aagcccagga tatacaggat gtacaaaagc 480 cctgatgttc ctcggggctg tgaaggccca tgtaaggtcc agtcctatga acaacgtcat 540 gatgtagccc atgtagggaa ggtaatttgt gtgtcagatg tcactcgagg taatgggctg 600 acacaccgtg ttggtaaagg tcctgtaatc aagtctgttt acgtatgggg aagaatttgg 660 atggatgaga tatcaagcca agaatcacac caatctgtca tgtttttttt agttcgggat 720 aggagaccat ttggtactcc acaggacttc ggtcaggtgt tcaacatgta tgataatgag 780 cccagtactg cgacggtgaa aaacgataac agagatcgat ttcaagtcct tcgtcgtttc 840 caggcaactg tgacaggtgg gcaatatgca agcaaggagc aagccatagt taggaaattc 900 atgaaggtga acaatcatgt gacttacaac catcaagaag ctgcgaagta tgacaatcac 960 acagagaatg cgcttttatt gtatatggca tgtacgcatg ccagtaatcc agtgtatgca 1020 actttgaaga tcagaatcta cttctacgac tctgtacaaa attaataaat attgaatttt 1080 atcatttctg aaagacgagc atcaatggtg ccctccaata cattgtacaa tacatgtcta 1140 atcgccctaa ttacattgtt tatactaatc actcctaaat ggtctaaata cttgatacat 1200 tgatatttaa atactcttaa gaaacgcgag gtctgaggat gtaaacgagt ccaaatttgg 1260 cagattagaa agcattggtg tagtcccccc gctttcctca ggttgtagtt gaactggatt 1320 tgcaccgtga ttatgtcgtg gttcctcagg aacggcctct cgtggtgttg tgttattctg 1380 aaatataggg gattgttgac cgtccagata tatacgccat tctctgcttg agctgcttga 1440 gctgcagtgt gatgtgcccc tgtgcgtgaa tccatgagga tggcaaccta gagcgacgaa 1500 atatgaacac ccacaaggga gatcaactcg tcttcgtcta gttgtcttct tggcgattct 1560 gtgtcgcacc ttgatgggaa cctgagaaga gtgggccttc gatggtgacg aagattgcat 1620 tctttagagc ccaattttta agtgcggtgt tcttttcctc ttccaagaac tctttatagc 1680 ttgaatgtgg tcctggattg cagaggaaga tagtgggaat tccgccttta atttgaactg 1740 gctttccgta ctttgtgttg ctttgccagt ctctttgggc ccccatgaat tctttaaaat 1800 gctttaagta atgcggatcg acgtcatcaa tgacgttata ccaagggtcg ttgttgtaca 1860 cttttgggct taagtctaaa tgaccacata aatagttatg tggtcctaac gacctggccc 1920 acattgtttt ccccgtcctg ctatcaccct ctaccactat acttatcggt cttaatggcc 1980 gcgcaggctt gacaacgttt gcagcaaccc attcatttaa gttcctctgg acttggtcaa 2040 atgagaccaa aaagggggaa atgtacattt ctattcggag gctaaaaatc ttatctaaat 2100 tactatttaa attatggaat tgtaaaatat aatcttttgg ggcctcttct ttcaaaattg 2160 cgagtgccga agctttggtt cctgaattga gtgcctcggc atatgcgtcg ttggcagatt 2220 ggcaaccccc tcgagccgat cttccatcga tctggaaaac cccatgatca agaacgtctc 2280 cgttttttgc gatatattct ttgacatctg ttgagctttt agctccctga atgttcggat 2340 ggaaatgtgc tgacctggtt ggggatgtga ggtcgaagaa tcgtggattt ttgcattgga 2400 atttaccttc gaattggatg aggatatgca agtgaggagt cccatcttcg tgcaattccc 2460 tgcaaatcct gataaatagt ttaattgtag gggtttctat ggcttggatt tgggaaagtg 2520 cttcttcttt agtgagagag caatgtgggt atgtgaggaa atagtttttc gcatttattc 2580 ttaaattttt aggaggagcc attgaccggt caatcggtgt ctctcaactc tctcctatgt 2640 aattggtgtc tggggtctta tttatatgga gacccaatgg cattattgta attatggaaa 2700 agtactttaa ttcaaatacc caaagcggcc atccgtataa tatt 2744 //