ID AB698493; SV 1; linear; genomic RNA; STD; VRL; 2418 BP. XX AC AB698493; XX DT 17-AUG-2012 (Rel. 113, Created) DT 20-DEC-2012 (Rel. 115, Last updated, Version 2) XX DE Rosellinia necatrix partitivirus 4 genomic RNA, segment: RNA 1, complete DE sequence. XX KW . XX OS Rosellinia necatrix partitivirus 4 OC Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae. XX RN [1] RP 1-2418 RA Yaegashi H., Kanematsu S.; RT ; RL Submitted (13-FEB-2012) to the INSDC. RL Contact:Hajime Yaegashi NARO, National Institute of Fruit Tree Science, RL Apple Research Station; Shimokuriyagawa, Nabeyasiki 92-24, Morioka, Iwate RL 0200123, Japan XX RN [2] RC DOI:10.1111/j.1574-6941.2012.01454.x RX PUBMED; 22808916. RA Yaegashi H., Nakamura H., Sawahata T., Sasaki A., Iwanami Y., Ito T., RA Kanematsu S.; RT "Appearance of mycovirus-like double-stranded RNAs in the white root rot RT fungus, Rosellinia necatrix, in an apple orchard"; RL FEMS Microbiol. Ecol. 83(1):49-62(2013). XX DR MD5; 301fa316e430f5568c6335c6fb738f78. XX FH Key Location/Qualifiers FH FT source 1..2418 FT /organism="Rosellinia necatrix partitivirus 4" FT /segment="RNA 1" FT /host="Rosellinia necatrix W1028" FT /strain="4-W1028/S3" FT /mol_type="genomic RNA" FT /country="Japan:Nagano, Suzaka, Nagano Fruit Tree FT Experiment Station" FT /collection_date="Jun-2009" FT /db_xref="taxon:1148493" FT CDS 86..2320 FT /codon_start=1 FT /transl_table=1 FT /gene="RdRp" FT /product="RNA-dependent RNA-polymerase" FT /db_xref="UniProtKB/TrEMBL:J7M5F9" FT /protein_id="BAM36402.1" FT /translation="MAFNSVRNYLAERLARVKEEWKLFQSHHSDQTETAQAHEDSDLRR FT YYKAISSDPTNEVKNRMLQSEFDNLKAAMRIDNESRSQPFELHSQPHPDAPYPDSRLPA FT PGIVRVPLFYHSGHVIHADPLTSRPLNPDLDADQLESYIPGDIDFGPEIDPILYALITQ FT KYPTYLPYINKYCRPAGTTDATFRDFNKEQKPSAPIPEDRQEAVLSHVFRLLDATPYLP FT IHFVDTQYAKTPLVTGTGYHNRFSYKARAHAKYSHPAEYADRPTSKGFFYNATYENART FT IIHKIKESGVPFNLHFAPEDADLSDAQVQQYIDSCNDFFNDYPTLLFTRNHISDREKTL FT KVRPVYAVDDLFIIIELMLTFPLLVQARKPSCCIMYGYETIRGANHLLDRLARSYETYF FT TIDWSGFDQRLPRVITDIYYTKFLRRLIVISHGYQPTYEYPDYPDLDAHKLYTRMDNLL FT HFLHLWYNNMTFLSVDGYAFRRTSAGVPSGLYNTQYLDSFSNLFLLIDGMIEFGFTDEE FT IRSVLLLVLGDDNTGMTSFDLKRLKEFISFLESYALARYNMHLSKTKSVITSLRSKIET FT LGYSCNYGRPKRPLDKLVAQLCYPEHKIKYHTMSARAIGIAYAAAAQDITFHTFCRDVY FT TMFSVFYKPDVRSNLDFLRSVLSDLEVPLAHFDSSTLPPFPSFEQVRARYASYQGPLQY FT TPKWNIAHFKNMPDVIPETGEPVMTMHIYEKLHGITPRMAPTFSTVVPST" XX SQ Sequence 2418 BP; 653 A; 802 C; 379 G; 584 T; 0 other; agttttatct gcataaaact tcgtctttcg acaagctccc agatattcag aattcacatt 60 cgactaccaa cacacacctg tcacaatggc tttcaactcc gtccgcaact acctcgccga 120 acgcctcgcc cgtgtcaaag aagaatggaa acttttccaa tctcatcaca gcgaccaaac 180 cgaaaccgca caagctcacg aagattccga tctccgacga tactataagg caatttcttc 240 cgatccaacc aacgaagtaa agaaccgtat gctacagtca gaattcgaca acctcaaagc 300 tgcaatgcgc atcgacaatg aatcacgctc tcagccgttt gaactgcact cgcaacctca 360 ccctgacgca ccttaccctg attcccgact tcccgcccct ggcatagtta gagtccctct 420 cttctaccac tctggccacg tcatccacgc tgaccccctg acctctcgac cgctcaatcc 480 cgacctcgac gccgaccaac ttgaatccta tattcctgga gacattgact ttggacctga 540 aatcgacccg attctctacg ccctcatcac tcagaaatac cccacctacc tgccgtacat 600 caacaaatac tgccgtcccg ctggaaccac agacgcaact ttccgtgatt ttaacaaaga 660 acagaaacca tccgcgccca ttcccgaaga ccgacaagaa gctgtactct cacatgtatt 720 tcgcctcctc gacgctaccc cttacctacc gatccacttt gtagacaccc aatatgcaaa 780 gaccccgctc gttaccggta ctggatacca taatcgtttt tcctataaag ctcgcgccca 840 cgcaaagtac tctcatcccg cagaatacgc cgaccgaccc acatcaaaag gctttttcta 900 caacgctact tacgaaaacg ctcgcacgat cattcacaag atcaaggaat ccggagtccc 960 ctttaacctg cacttcgccc ccgaagacgc cgacctgtcc gacgcccaag tccaacagta 1020 catcgactca tgcaatgact tcttcaacga ttacccgaca ctccttttca cccgtaatca 1080 catctcagac agagagaaaa ctctcaaagt ccgccccgtg tacgctgttg acgatttatt 1140 catcatcatc gaactcatgc tgaccttccc tctgctcgta caagcccgca agccttcctg 1200 ctgcatcatg tatggatacg aaacgatccg tggagcaaac cacctgctcg accgactcgc 1260 tcgctcctat gaaacctact tcaccataga ctggtccggt tttgaccaac gcctaccacg 1320 cgtcatcacc gacatctact acactaagtt tctccgacgc ttaatcgtaa tctcccatgg 1380 ataccagccc acctacgaat atcctgatta ccccgacctc gacgcccaca aattgtacac 1440 tagaatggac aacctccttc attttctcca cctctggtat aacaatatga ctttcctttc 1500 cgttgatggc tacgcattcc gccgcacttc cgccggagta ccatctggcc tctacaacac 1560 ccaatatctc gactcgttct ctaacctctt ccttctcatc gatggaatga tagaattcgg 1620 cttcacagat gaggaaattc gctccgtcct gctcctcgtc cttggcgacg ataacactgg 1680 catgaccagt ttcgacctca agcgcctcaa ggaattcatc tccttcctcg agtcttacgc 1740 tctcgctcgc tacaacatgc acctttccaa aacaaagtct gttatcacat cccttcgctc 1800 aaagattgaa acacttggct actcatgcaa ctatggccga ccaaaacgcc cccttgacaa 1860 actcgtggct caactgtgct accccgagca caaaataaag taccacacca tgtctgcccg 1920 cgctattggt atcgcttatg ctgccgccgc acaagatatc acatttcaca cattctgtcg 1980 tgacgtgtat accatgttct cagtgtttta caaacccgac gttcgttcta acctcgactt 2040 ccttcgctcc gtcctttccg acctcgaagt ccccctcgct catttcgatt cgtctaccct 2100 ccccccgttc ccctcgttcg aacaagttcg tgcgcgatac gcctcttacc aaggcccact 2160 ccaatataca cctaagtgga acatcgcaca tttcaagaac atgcccgacg tgatcccgga 2220 aactggtgaa cctgttatga caatgcacat ctatgaaaaa cttcatggca ttactcctcg 2280 catggctccc acgttttcaa cggttgtacc tagtacataa tgttaccgtt ttagatttta 2340 ttcaacataa tttttttcac tgttttaaaa caaaaaaaaa aaaaaaaaaa aaaataaaaa 2400 ccaaaaaaaa acaaagct 2418 //