ID   AB110980; SV 1; linear; genomic RNA; STD; VRL; 1776 BP.
XX
AC   AB110980;
XX
DT   23-JUL-2004 (Rel. 80, Created)
DT   13-DEC-2008 (Rel. 98, Last updated, Version 2)
XX
DE   Helicobasidium mompa partitivirus V1-2 RDRP gene for RNA-dependent RNA
DE   polymerase, complete cds.
XX
KW   .
XX
OS   Helicobasidium mompa partitivirus V1-2
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-1776
RA   Osaki H.;
RT   ;
RL   Submitted (29-MAY-2003) to the INSDC.
RL   Contact:Hideki Osaki National Institute of Fruit Tree Science, Laboratory
RL   of Plant Pathology; 2-1 Fujimoto, Tsukuba, Ibaraki 305-8605, Japan
XX
RN   [2]
RX   PUBMED; 15323245.
RA   Osaki H., Nomura K., Matsumoto N., Ohtsu Y.;
RT   "Characterization of double-stranded RNA elements in the violet root rot
RT   fungus Helicobasidium mompa";
RL   Mycol. Res. 108(Pt 6):635-640(2004).
XX
DR   MD5; f0456d8367c8597f18366729cf34671f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1776
FT                   /organism="Helicobasidium mompa partitivirus V1-2"
FT                   /host="Helicobasidium mompa"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:233050"
FT   CDS             108..1724
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="RDRP"
FT                   /product="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:Q6BE42"
FT                   /db_xref="UniProtKB/TrEMBL:Q6BE42"
FT                   /protein_id="BAD32678.1"
FT                   /translation="MSAFWNLEFHGMDPFAPNIPQFLLSPSQHYVSNHAIIKDQFHYQA
FT                   LDIVTEWFRPPHPIHPVHYTDLRWYPWKLSMSAERPFTFMQSAKDYVKQRYEAGLIPNR
FT                   SLKFGNLYTPIFEYCRHYHHNVKNGRSPILDLITLHVKPALVLVSSGIDKVRTVFGVPK
FT                   YLIFAEAMFFWPLFSIYFTSANTPLLWNYESLNGGWHRLDSEYHARYTMYSPIFNLDWS
FT                   EFDMRVYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLHPPYSEPFTNPQRLRN
FT                   LWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNAVIIVTCLLALGYEV
FT                   RHDHLIKLMGDDALFGLLESIPIEHWSEFLDALAAEALFRFNAKLSATKCGYTRTIQGA
FT                   TVLSYTNWNGWPVRSAEDVLAHLLHPKSLKDSAPRLMARSIGLYYASGANPRIRPICEH
FT                   IFSTLKHQGFTVRKVNLAEFMDPRGLGTYNIEVDNFPSPLEAMCRLSRPSTRSEEIQSQ
FT                   YWDRSHFEFDAGQVRNCQSSF"
XX
SQ   Sequence 1776 BP; 445 A; 550 C; 320 G; 461 T; 0 other;
     acaaaacttt cagaggaccc ccctcagatt tgttctgttt ctcttttgcc gccttttcga        60
     gcctcaccga aaactcgcta ctactaacac ccaccccctg acacacaatg tctgctttct       120
     ggaatctcga attccacgga atggatccgt ttgctccgaa cataccccag ttcttgctct       180
     caccaagcca gcactatgtt tcaaaccatg caatcatcaa ggatcaattt cactatcaag       240
     ctctagacat cgttaccgaa tggttccgcc cccctcaccc cattcacccc gtacactata       300
     ccgacttacg ttggtacccc tggaaactat ccatgagtgc tgaacgcccg ttcacattca       360
     tgcaaagcgc caaggattac gttaaacaaa gatatgaagc tggtctcatc cccaatcgca       420
     gtctcaaatt tggaaatctg tatacaccga tcttcgaata ctgccgacac taccatcaca       480
     atgtcaagaa tggccgctcg ccaatcttag accttatcac gttacacgtt aaacctgccc       540
     ttgtcctagt ctcttcagga atagacaaag tacgcaccgt ttttggagtc ccgaaatacc       600
     tcattttcgc tgaagccatg ttcttttggc ccctcttctc catctacttc acgtcagcta       660
     acacccctct cctttggaat tacgaatctc taaatggtgg ttggcaccga ttagactccg       720
     agtatcacgc tcgctacaca atgtactccc cgatcttcaa cttagattgg tcagagttcg       780
     acatgcgcgt ttacttcacc gtttggtccg acatcatcga ccgagtctca acctacttct       840
     gtttctgtgg ccgctactgc cccacactcc ccgtcctcga cgaagaaact ggtacccaac       900
     tccaccctcc gtattccgaa ccgtttacca accctcaaag gttgcgcaat ctctggttct       960
     ggattagata tgcctacttc aatatggctg ccgtcactac gacaggcaaa attttcaagc      1020
     gttcattcgc tggaatgcca tctggtatat tctgcaccca gttctacgac tccttctaca      1080
     atgctgtgat tatcgtcact tgcttactag cccttggcta cgaagtgaga cacgaccatc      1140
     tcatcaagct catgggagac gacgcactct ttggtctgtt ggaaagtatc ccgatcgaac      1200
     actggtctga attcttagat gccctcgctg ccgaggcact cttccgattc aatgctaaac      1260
     tcagtgctac gaaatgtgga tacacccgca ccatccaagg tgcgactgtc ctttcataca      1320
     cgaattggaa tggatggcct gtccgctctg ctgaagacgt actcgcccac ctactacacc      1380
     ccaaatcgtt gaaggatagt gcccctcgcc tgatggccag atccatcgga ctctactacg      1440
     ccagtggagc caatccccgg atccgaccta tctgcgaaca cattttctcg acactgaagc      1500
     atcaaggctt caccgtccgg aaagttaatc tcgctgaatt catggaccct cgtggtctag      1560
     gaacttacaa tatcgaggtt gacaacttcc cttccccact cgaagcgatg tgccgactct      1620
     ctcgcccctc taccagatct gaagaaattc aatctcaata ctgggaccga tcgcacttcg      1680
     aattcgacgc cggtcaagtc cggaactgcc aaagctcatt ctgagcacgc atctccagac      1740
     ccttattctt tctacccaaa aaaaaaaaaa aaaagt                                1776
//