ID AB110980; SV 1; linear; genomic RNA; STD; VRL; 1776 BP. XX AC AB110980; XX DT 23-JUL-2004 (Rel. 80, Created) DT 13-DEC-2008 (Rel. 98, Last updated, Version 2) XX DE Helicobasidium mompa partitivirus V1-2 RDRP gene for RNA-dependent RNA DE polymerase, complete cds. XX KW . XX OS Helicobasidium mompa partitivirus V1-2 OC Viruses; dsRNA viruses; Partitiviridae; Alphapartitivirus. XX RN [1] RP 1-1776 RA Osaki H.; RT ; RL Submitted (29-MAY-2003) to the INSDC. RL Contact:Hideki Osaki National Institute of Fruit Tree Science, Laboratory RL of Plant Pathology; 2-1 Fujimoto, Tsukuba, Ibaraki 305-8605, Japan XX RN [2] RX PUBMED; 15323245. RA Osaki H., Nomura K., Matsumoto N., Ohtsu Y.; RT "Characterization of double-stranded RNA elements in the violet root rot RT fungus Helicobasidium mompa"; RL Mycol. Res. 108(Pt 6):635-640(2004). XX DR MD5; f0456d8367c8597f18366729cf34671f. XX FH Key Location/Qualifiers FH FT source 1..1776 FT /organism="Helicobasidium mompa partitivirus V1-2" FT /host="Helicobasidium mompa" FT /mol_type="genomic RNA" FT /db_xref="taxon:233050" FT CDS 108..1724 FT /codon_start=1 FT /transl_table=1 FT /gene="RDRP" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q6BE42" FT /db_xref="UniProtKB/TrEMBL:Q6BE42" FT /protein_id="BAD32678.1" FT /translation="MSAFWNLEFHGMDPFAPNIPQFLLSPSQHYVSNHAIIKDQFHYQA FT LDIVTEWFRPPHPIHPVHYTDLRWYPWKLSMSAERPFTFMQSAKDYVKQRYEAGLIPNR FT SLKFGNLYTPIFEYCRHYHHNVKNGRSPILDLITLHVKPALVLVSSGIDKVRTVFGVPK FT YLIFAEAMFFWPLFSIYFTSANTPLLWNYESLNGGWHRLDSEYHARYTMYSPIFNLDWS FT EFDMRVYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLHPPYSEPFTNPQRLRN FT LWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNAVIIVTCLLALGYEV FT RHDHLIKLMGDDALFGLLESIPIEHWSEFLDALAAEALFRFNAKLSATKCGYTRTIQGA FT TVLSYTNWNGWPVRSAEDVLAHLLHPKSLKDSAPRLMARSIGLYYASGANPRIRPICEH FT IFSTLKHQGFTVRKVNLAEFMDPRGLGTYNIEVDNFPSPLEAMCRLSRPSTRSEEIQSQ FT YWDRSHFEFDAGQVRNCQSSF" XX SQ Sequence 1776 BP; 445 A; 550 C; 320 G; 461 T; 0 other; acaaaacttt cagaggaccc ccctcagatt tgttctgttt ctcttttgcc gccttttcga 60 gcctcaccga aaactcgcta ctactaacac ccaccccctg acacacaatg tctgctttct 120 ggaatctcga attccacgga atggatccgt ttgctccgaa cataccccag ttcttgctct 180 caccaagcca gcactatgtt tcaaaccatg caatcatcaa ggatcaattt cactatcaag 240 ctctagacat cgttaccgaa tggttccgcc cccctcaccc cattcacccc gtacactata 300 ccgacttacg ttggtacccc tggaaactat ccatgagtgc tgaacgcccg ttcacattca 360 tgcaaagcgc caaggattac gttaaacaaa gatatgaagc tggtctcatc cccaatcgca 420 gtctcaaatt tggaaatctg tatacaccga tcttcgaata ctgccgacac taccatcaca 480 atgtcaagaa tggccgctcg ccaatcttag accttatcac gttacacgtt aaacctgccc 540 ttgtcctagt ctcttcagga atagacaaag tacgcaccgt ttttggagtc ccgaaatacc 600 tcattttcgc tgaagccatg ttcttttggc ccctcttctc catctacttc acgtcagcta 660 acacccctct cctttggaat tacgaatctc taaatggtgg ttggcaccga ttagactccg 720 agtatcacgc tcgctacaca atgtactccc cgatcttcaa cttagattgg tcagagttcg 780 acatgcgcgt ttacttcacc gtttggtccg acatcatcga ccgagtctca acctacttct 840 gtttctgtgg ccgctactgc cccacactcc ccgtcctcga cgaagaaact ggtacccaac 900 tccaccctcc gtattccgaa ccgtttacca accctcaaag gttgcgcaat ctctggttct 960 ggattagata tgcctacttc aatatggctg ccgtcactac gacaggcaaa attttcaagc 1020 gttcattcgc tggaatgcca tctggtatat tctgcaccca gttctacgac tccttctaca 1080 atgctgtgat tatcgtcact tgcttactag cccttggcta cgaagtgaga cacgaccatc 1140 tcatcaagct catgggagac gacgcactct ttggtctgtt ggaaagtatc ccgatcgaac 1200 actggtctga attcttagat gccctcgctg ccgaggcact cttccgattc aatgctaaac 1260 tcagtgctac gaaatgtgga tacacccgca ccatccaagg tgcgactgtc ctttcataca 1320 cgaattggaa tggatggcct gtccgctctg ctgaagacgt actcgcccac ctactacacc 1380 ccaaatcgtt gaaggatagt gcccctcgcc tgatggccag atccatcgga ctctactacg 1440 ccagtggagc caatccccgg atccgaccta tctgcgaaca cattttctcg acactgaagc 1500 atcaaggctt caccgtccgg aaagttaatc tcgctgaatt catggaccct cgtggtctag 1560 gaacttacaa tatcgaggtt gacaacttcc cttccccact cgaagcgatg tgccgactct 1620 ctcgcccctc taccagatct gaagaaattc aatctcaata ctgggaccga tcgcacttcg 1680 aattcgacgc cggtcaagtc cggaactgcc aaagctcatt ctgagcacgc atctccagac 1740 ccttattctt tctacccaaa aaaaaaaaaa aaaagt 1776 //