ID   AB076041; SV 1; linear; genomic RNA; STD; VRL; 1969 BP.
XX
AC   AB076041;
XX
DT   07-JAN-2003 (Rel. 74, Created)
DT   24-APR-2009 (Rel. 100, Last updated, Version 3)
XX
DE   Soybean dwarf virus ORF3, ORF5 genes for coat protein, readthrough protein,
DE   strain:YS, isolate:IK00-1.
XX
KW   .
XX
OS   Soybean dwarf virus
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-1969
RA   Terauchi H., Kanematsu S., Hidaka S.;
RT   ;
RL   Submitted (12-DEC-2001) to the INSDC.
RL   Contact:Seiji Kanematsu National Agricultural Research Center for Tohoku
RL   region, Laboratory of Plant Disease Management; 4-Akahira,
RL   Shimo-Kuriyagawa, Morioka, Iwate 020-0198, Japan
XX
RN   [2]
RX   PUBMED; 18943620.
RA   Terauchi H., Honda K., Yamagishi N., Kanematsu S., Ishiguro K., Hidaka S.;
RT   "The N-Terminal Region of the Readthrough Domain Is Closely Related to
RT   Aphid Vector Specificity of Soybean dwarf virus";
RL   Phytopathology 93(12):1560-1564(2003).
XX
DR   MD5; 199a0dee8c7c3145f88ba480d1ebc317.
DR   RFAM; RF00434; BTE.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1969
FT                   /organism="Soybean dwarf virus"
FT                   /strain="YS"
FT                   /isolate="IK00-1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12049"
FT   CDS             <1..254
FT                   /codon_start=3
FT                   /transl_table=1
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q8B6L9"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q8B6L9"
FT                   /protein_id="BAC54072.1"
FT                   /translation="STSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTRAINGL
FT                   EWHDTSEDQFKIHYKGNGESKIAGSFKISINVLTQNAK"
FT   CDS             <255..1820
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="ORF5"
FT                   /product="readthrough protein"
FT                   /note="This protein is translated by in-frame readthrough
FT                   of the ORF3 stop codon."
FT                   /db_xref="GOA:Q8B6L8"
FT                   /db_xref="InterPro:IPR002929"
FT                   /db_xref="UniProtKB/TrEMBL:Q8B6L8"
FT                   /protein_id="BAC54073.1"
FT                   /translation="VDGEPGPKPGPDPAPQPTPTPEPTPAKHERFIAYTGTLSTLISAR
FT                   QSSDSISLYSIRSQRIRYIEDENSSWTNIDAKWYSQNSVEAIPMFVYPVPEGTWSIEIS
FT                   CEGYQAASSTSDPHRGKCDGMIAYDDDSSKVWNVGQQNNVTITNNKADNDWKYGHPDLT
FT                   INGDRFDQNQVVEKDGIISFHLVTTGPNASFFLVAPAVKKTAKYNFCVSYGDWTDRDME
FT                   FGMVSVVLDEHLEGARSSQYVRKTPRSGHVGVNRSHRLQDNFVPTEYVSDEDSSSNSSI
FT                   VSNRPSTPDNDSDAQFAESMKGKLPSQTKLPPKGFLSRLSTKEKKEISNSKPSNVEGLV
FT                   GPLVVAYGYPSQTGVYDAAREILQAKEAAENLAELERDLKEINKLEPPDVIVQEEIPDF
FT                   VPPSEKILKEDDPDYVPPIWQNADQAVLVSSYEPPDWSRPAYGSGDPPKKTGTLKGTLS
FT                   KLGGSLRSGESSLRGSLRKTQDQTDLDNKLSKLSVIQRSRYQRILNNLGKMRARAYIDG
FT                   LDLD"
XX
SQ   Sequence 1969 BP; 601 A; 434 C; 460 G; 474 T; 0 other;
     cttccacctc gtcaggctcc atcgcttatg agcttgaccc acactgcaag tactccgaaa        60
     ttcaatcgct actcaataaa ttcagtatca caaagagcgg ttcgaaacgt ttcccaacca       120
     gagctatcaa tggcctcgaa tggcatgata ccagtgaaga tcaattcaag atccactata       180
     aggggaacgg agagtccaag atcgcaggct ccttcaagat ctcgatcaat gtcttaacac       240
     agaatgctaa ataggtagac ggagaaccgg gtccgaaacc aggtccagac ccagcacccc       300
     agccaacacc aacacccgaa ccaacgccag ccaaacacga gagatttatc gcgtacaccg       360
     gtacgttgtc cacgcttatt agcgcgcgac agtcttctga cagtatctca ctctactcca       420
     ttcggagtca gagaattaga tacatcgaag atgaaaattc cagttggaca aacatagatg       480
     caaaatggta ctcgcagaat tctgttgagg ccattccaat gtttgtttat ccagtgcccg       540
     aaggtacttg gtcaattgaa atatcttgtg aaggttacca ggcagcgtca agtacatcag       600
     acccccatcg tggaaaatgc gatggcatga ttgcttacga cgacgattct tcgaaggtgt       660
     ggaatgttgg tcagcagaat aacgtgacca ttaccaataa taaggccgat aatgattgga       720
     aatatggtca ccctgatctc acgatcaatg gtgacagatt cgatcagaat caagtagtcg       780
     agaaagatgg aatcatttca ttccatttag taactactgg cccaaacgca agtttctttc       840
     tcgtcgctcc agctgttaag aaaacagcta aatacaactt ttgtgtatca tacggagatt       900
     ggacggatag agatatggag tttggaatgg tatcagtagt gctcgatgag cacttggaag       960
     gtgcaaggag ttctcagtat gttaggaaaa cgccaagatc aggtcatgtt ggcgtcaatc      1020
     gttctcaccg attgcaagac aatttcgtac cgacggaata tgtcagtgat gaagatagta      1080
     gtagtaatag tagtatagtt agcaatcgac catcaactcc ggacaatgat agtgacgccc      1140
     aatttgctga atctatgaaa ggtaagcttc cgtctcagac gaagctcccg cctaaagggt      1200
     tcctatcacg gttaagcaca aaagagaaaa aagaaatctc caattctaaa ccctcgaatg      1260
     tcgaaggtct ggttggtcct cttgttgtag cttatggata cccatctcaa acgggtgttt      1320
     atgacgcagc aagagagata ctgcaagcta aagaagctgc agaaaacctg gcagaattag      1380
     aaagggactt aaaggagatt aacaagcttg aaccaccgga tgtaattgtt caggaagaaa      1440
     tccctgactt tgtgccgcca tcggagaaga tactaaagga agatgatcct gactatgtac      1500
     ctccgatttg gcagaatgcc gaccaggctg tattggtctc aagttatgag cctccagact      1560
     ggagtcggcc agcttatggg tcaggtgacc cacctaagaa gacaggaaca ctaaaaggta      1620
     ctctctccaa attagggggt tccttaagga gtggtgaatc gtctcttaga ggtagcctcc      1680
     gcaagacgca agatcaaact gatctagata acaagttatc caaactcagt gttatccaga      1740
     gatcccggta ccagaggatt ctcaataacc tgggtaaaat gcgtgcgcga gcatatattg      1800
     atggtttaga tttagattag tataatagaa gtaagtgtgc gctttccatc acattaggtc      1860
     ggagccaacc ttggtgagtt gctgtcgtgg gatcctggga aacaggttcg gtgaacaaaa      1920
     gccggtaatc tcgggcgttc gtcagacgcc gtcgtatcaa cacagtatg                  1969
//