ID AB012574; SV 1; circular; genomic DNA; STD; PHG; 7965 BP. XX AC AB012574; XX DT 07-OCT-1998 (Rel. 57, Created) DT 13-DEC-2008 (Rel. 98, Last updated, Version 4) XX DE Vibrio phage Vf12 DNA, complete genome. XX KW . XX OS Vibrio phage Vf12 OC Viruses; Inoviridae. XX RN [1] RP 1-7965 RA Chang B., Taniguchi H., Yoshida S.; RT ; RL Submitted (24-MAR-1998) to the INSDC. RL Contact:Bin Chang University of Occupational and Environmental Health, RL Department of Microbiology; 1-1 Iseigaoka, Yahatanishiku, Kitakyushu, RL Fukuoka 807-8555, Japan XX RN [2] RX PUBMED; 9748441. RA Chang B., Taniguchi H., Miyamoto H., Yoshida S.; RT "Filamentous bacteriophages of Vibrio parahaemolyticus as a possible clue RT to genetic transmission"; RL J. Bacteriol. 180(19):5094-5101(1998). XX DR MD5; a1efe85f8e12bf746dc07b66d592b22e. DR EuropePMC; PMC107544; 9748441. XX FH Key Location/Qualifiers FH FT source 1..7965 FT /organism="Vibrio phage Vf12" FT /host="Vibrio parahaemolyticus" FT /mol_type="genomic DNA" FT /note="replicative form DNA of Vf12" FT /note="synonym: bacteriophage Vf12" FT /db_xref="taxon:127511" FT CDS join(7348..7965,1..591) FT /codon_start=1 FT /transl_table=11 FT /gene="vpf402" FT /product="Vpf402" FT /db_xref="GOA:Q7DKP2" FT /db_xref="InterPro:IPR003491" FT /db_xref="UniProtKB/TrEMBL:Q7DKP2" FT /protein_id="BAA33520.2" FT /translation="MSWCPSPTRPLNNVSIWGCSMTTATNILKSFDEQSVHIDYLCFTF FT AVKDLRHCHDAVRRLHKHEEYKGFAKSGLLQRHCRAPKFPAPPVFNPTVAQTSDEIDAY FT NKAFDICYRNYLEDCLRIFTNQVLGLSLSAPRGLGFQFYTESMKLTSPDGEDFCGFVGI FT GGNNDTVHFQINGTGCKHVFARRPTWSLHDWLTNVLGVQTLARVDLAYDDYDGIFDCEY FT AYKAWRDDCFRTAERGRGPVLHEDMTIASIGKDGKPIYTKEQYSIGSRTSRIYWRIYNK FT ALEQKLANTGLVWYRSEVELKKWNVDVLLNPAGAYAALNDFAASISTAKKFNTKPVPTK FT RAALDLLASAHWMRRQYGKILNSLIEFHEGDIETVVGSLVRDGTKFTFPDTYGKLVTHI FT LET" FT CDS 595..948 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf117" FT /product="Vpf117" FT /db_xref="InterPro:IPR009712" FT /db_xref="UniProtKB/TrEMBL:O88148" FT /protein_id="BAA33514.1" FT /translation="MAKSVFVLGMDITWNSARGDSAQLNVSRPLREINSEKFKRRTIGE FT SGDVNPQWDQPLMIDHQYALLLERTGALVPRREYQLRLEINPEDPLAGAIVTELIPVDD FT DIKKHFEASLKAK" FT CDS 960..1205 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf81" FT /product="Vpf81" FT /db_xref="GOA:O88108" FT /db_xref="UniProtKB/TrEMBL:O88108" FT /protein_id="BAA33515.1" FT /translation="MPVCALPNADGFLAVVPDIEAASCSGYVMVTAQEYDTLMSYTQLT FT PGEISQAFGLGFTLVFVGGYLSTYAIKMAIRLIKLL" FT CDS 1216..1449 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf77" FT /product="Vpf77" FT /db_xref="GOA:O88142" FT /db_xref="UniProtKB/TrEMBL:O88142" FT /protein_id="BAA33516.1" FT /translation="MKRLNALKKFGKQAAATVTVAVLSVPAMAAEGGAADPFSAIDLSG FT VATKIGAAGLVIVGITMAYKSITLAKRAVNKA" FT CDS 1583..3058 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf491" FT /product="Vpf491" FT /db_xref="GOA:O88107" FT /db_xref="UniProtKB/TrEMBL:O88107" FT /protein_id="BAA33517.1" FT /translation="MNHYLRFFIALVILCASSHTYALEARIGYMQMRGCGSQGDWVDPY FT KVNTCFLDTGYFDSCTFEKTPYSDARYPYQTVCDNGLGLAYYEVRCPENSEFDPSTLRC FT KSVCEYGKNPDGTCMDACQFKKSIDETKLLQWVAYVYGEQVTGACYGDFGATRCELGRV FT PSDTTLCTDVESGQWTQNTLCHGNFQFTGNQCEGGTLFWGKDGPDTPIIPDDPIHDPDD FT PTGDIEDPSVLPDGSTNTVNPPDTEKKPDVEDPDTDDSTDMAVLNAIKGLNSDVNKALN FT DMNIDINQASADVQNQIIALNASMVTNTQAIQKQQINDNKIYENTKALIQQANADITTA FT VNKNTNAINGVGDDVEKIAGAMDGIAEDVSGISDTLDGIANTDTSGAGTGGTCIESQTC FT TGFYESAYPDGLGGLVSGQLDSLKHNTIDNFVSSFGDLDLSSAKRPSFVLPVPFFGDFS FT FEEQISFDWVFGFIRAVLIMTSVFAARRIIFGG" FT CDS 3060..3374 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf104" FT /product="Vpf104" FT /db_xref="GOA:O88125" FT /db_xref="InterPro:IPR019670" FT /db_xref="UniProtKB/TrEMBL:O88125" FT /protein_id="BAA33518.1" FT /translation="MEWLVDLFNKLLVFLYQLLISLVNMLKDLFFWAVEQIMAMVNLLL FT SGVFSLFAPVDMSQYMTSIPPTVAWVMAAVGVPQCLSIILAAITVRLMLQLIPFTRLGS FT " FT CDS 3371..4513 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf380" FT /product="Vpf380" FT /db_xref="InterPro:IPR008900" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:O88128" FT /protein_id="BAA33519.1" FT /translation="MIYAIAGRPGGGKTYEAVAYHIIPAIKDGRKVITNITLNIDWFVK FT VFGEDVRELIKIVDGRLTDFGSTTRPFSQIEDYSDEWRNEKGQGPLYVVDEAHMSLPSR FT GLAAPILEWYSIHRHYGVDIILLTQNIRKVHRDIKDMIEVTYRCTKNTAMGSTSSYTKK FT VQDGCAGEVVNTSTRFYKSEYFPFYKSHSQSNKQVQEAEAKDIRPFWKRWPVVGTGVLL FT SLGLVFNIWAWWPESEQPPDPVKPPQPVQAQLPDGTPTVDTAETKAKKKKKASGFGPLE FT DYDFYITGYAKQIAYAKRLKYAAELDRDLTFYKIYIDVYDGRDKLFSFDHLDLVKIGYQ FT FEVLSDCVYRVTWEETERIFTCGQREKPSDILQQNMPVHI" XX SQ Sequence 7965 BP; 2028 A; 1851 C; 1787 G; 2299 T; 0 other; gttgacttgg cctatgacga ttacgacggg atttttgatt gcgaatacgc ttacaaggcg 60 tggcgtgacg actgtttccg caccgctgaa cgtggtcgtg gtcctgtgct tcatgaagac 120 atgaccattg ccagtatcgg caaagatggc aaaccgattt acaccaaaga gcaatactcg 180 attggttcgc gtacctcgcg catttactgg cgtatctaca acaaggctct tgagcagaaa 240 ctcgcgaaca cgggtcttgt ctggtaccgc tctgaagtcg agctgaaaaa atggaatgtt 300 gatgtgttgc tgaatccagc tggcgcgtat gccgcgctga atgatttcgc tgcctcgatt 360 tctaccgcta agaaattcaa taccaaacct gtcccgacga aacgcgcggc gttagacctg 420 ttggcctctg cgcactggat gcgtcgccag tacgggaaaa tccttaattc acttatcgag 480 ttccatgagg gcgacattga aaccgtggtc ggttcccttg tccgtgatgg aacgaaattc 540 accttccccg atacctacgg caagttggtg actcacatat tggagactta acaaatggct 600 aaatccgttt ttgtacttgg catggatatc acttggaact cagcacgtgg tgacagtgct 660 caactgaacg tgtcgcgtcc tctacgtgaa atcaactcgg agaaattcaa acgccgcact 720 atcggtgaat ccggtgatgt gaatccccaa tgggatcaac cgttgatgat tgatcatcaa 780 tacgccctat tacttgagcg tacgggtgct ctcgttcctc gtcgtgaata ccaattgcgc 840 ttggagatta acccagaaga cccattggcg ggtgccattg tgacagaact catccctgtg 900 gatgacgaca tcaagaaaca ttttgaagcc tcgctaaagg ctaaataagg aatttcgtta 960 tgcctgtgtg tgctctaccg aacgcggacg gttttctcgc tgtcgttcct gacattgaag 1020 cggcttcatg cagtggttat gtcatggtga cggctcaaga atatgacacg ttaatgagct 1080 acacacagct gactccagga gagatatctc aagcgttcgg cttgggtttt accttggtgt 1140 tcgttggcgg ctatctctca acttacgcca tcaagatggc aatacgttta ataaaactac 1200 tttgaggaat ctgttatgaa acgtctaaac gcgcttaaaa agttcggtaa acaagcggcg 1260 gcaaccgtca ctgttgcggt gctttctgtc cctgctatgg cggcggaagg tggtgcggct 1320 gacccgttct ccgctatcga cttatctggt gtggcaacca aaatcggcgc ggcaggtctg 1380 gtgattgtcg gcattactat ggcttacaaa tccatcactc ttgctaagcg tgctgtgaac 1440 aaggcttaag tttatgttgg ccgttctcca cgatgtccaa ctcatcgtct ttgtgctttt 1500 gggtggcatt gccggatacg tggccagcca aaactttaga ggataagggg gcttcggctc 1560 ccttttttat tggttttata caatgaatca ctatctccgt ttttttattg cccttgttat 1620 tctgtgtgct agtagtcata cgtatgcttt agaagcgcgt attggttata tgcaaatgag 1680 gggttgtggc tctcaaggtg attgggttga cccttacaag gtgaatactt gttttttgga 1740 tactgggtat ttcgactcat gcacatttga gaagacaccc tattctgatg ctcgctatcc 1800 ctatcaaacg gtttgtgata atgggctcgg tcttgcttat tacgaggttc gttgtccaga 1860 aaatagcgaa tttgaccctt caaccttacg ttgcaaatca gtttgtgaat atggcaaaaa 1920 ccctgacggc acctgtatgg acgcttgcca gttcaaaaaa tccattgatg aaaccaagct 1980 gcttcaatgg gttgcgtacg tctacggtga acaagtcact ggggcatgct atggcgactt 2040 tggggcaacc cgttgcgaac taggccgcgt tcccagtgat actacgcttt gtacggatgt 2100 cgagtctggt caatggactc aaaacacatt atgccacggt aacttccagt tcacgggcaa 2160 tcaatgtgaa ggcggtacac tcttctgggg taaagatggc cctgacactc ctatcattcc 2220 tgatgaccca attcatgacc ctgacgaccc aacaggcgac atcgaagacc ctagcgtatt 2280 acctgatggc tcaaccaata cggtgaatcc accggatact gagaaaaagc cggatgttga 2340 agaccctgat actgatgatt caacagacat ggcagtattg aatgcgatta aaggcttgaa 2400 ctcggatgtc aacaaggcgc taaatgatat gaacatcgac atcaatcaag ccagtgctga 2460 cgttcaaaac caaatcattg cattgaatgc gtcgatggtc accaatacgc aagccattca 2520 aaagcagcaa atcaacgaca ataagattta cgaaaacact aaggccctta tccaacaagc 2580 gaatgctgac atcaccacgg ccgtgaacaa gaataccaat gccattaatg gtgtgggtga 2640 tgatgtagag aaaattgcag gggcaatgga tggtatcgcg gaggatgttt ccggcatttc 2700 cgacacctta gacggcattg ccaacacaga tacgtctggc gcaggtacgg gtggtacgtg 2760 catcgaatct caaacctgta caggttttta tgagtcggcc tatcccgatg gcttaggtgg 2820 tttggtgtct gggcagttag acagtctcaa acacaacacc atcgacaact ttgtcagctc 2880 gtttggtgac ctcgacttat ccagtgccaa gcgcccttct ttcgtgctcc ctgtgccctt 2940 cttcggtgac ttcagttttg aagagcaaat cagctttgat tgggtgttcg gttttattcg 3000 tgcggtgctc atcatgacgt cagtgtttgc ggcgcgtcgt atcatcttcg gaggttaata 3060 tggaatggtt agtcgattta tttaacaagc tgttggtgtt cctctatcag cttttaatct 3120 cgctggtcaa catgctcaaa gacctgttct tttgggcggt tgagcaaatc atggcaatgg 3180 tgaatctgtt gctctctggt gtcttctccc tattcgctcc ggtcgatatg agccagtaca 3240 tgacaagtat tccgcctacc gtggcttggg ttatggcagc ggtcggtgtg cctcaatgcc 3300 tgtctatcat tctggccgct attacggtgc gtttgatgct gcaattgatt ccgtttacga 3360 ggttaggctc atgatatacg ccatagcagg gagaccaggt ggcggtaaaa cctatgaggc 3420 tgtcgcctat cacatcattc cggccattaa agatggccgc aaagtcatca ccaatatcac 3480 cttaaacatt gattggttcg ttaaggtgtt tggtgaagac gttcgagaac tcatcaaaat 3540 cgtggatgga cgtttaacgg atttcggttc gactacgcgc ccgttcagcc agattgaaga 3600 ctactccgac gaatggcgta atgaaaaagg acaagggcca ctttatgtgg tcgatgaggc 3660 gcacatgagc ttgccaagtc gaggcttggc cgcgccgatt ctagaatggt actcaataca 3720 ccgtcactac ggtgtcgata tcatcttgct cacgcagaac atccgcaaag tgcatcgaga 3780 cattaaggac atgattgaag tgacctaccg atgcacaaag aacacggcca tgggctcaac 3840 cagttcttac accaagaaag tgcaagatgg ttgtgccggt gaagtggtga acacctctac 3900 ccgattttat aagtcggaat acttcccgtt ctataagagt cattcgcaat ccaacaagca 3960 agttcaggaa gccgaagcaa aagacattcg cccgttctgg aagcgttggc ctgtcgtcgg 4020 aacgggggtg ctgttatcgc ttggattggt tttcaatatc tgggcttggt ggccagagtc 4080 agagcaaccg cccgaccccg ttaaaccacc acaaccagta caagcgcagc tgcctgacgg 4140 aacgccaacg gtagatacgg cagaaaccaa agcgaagaag aaaaagaaag catcagggtt 4200 cgggcctttg gaagattacg acttctacat caccggatac gcaaagcaaa tcgcctacgc 4260 caaacggctg aagtatgctg ccgaactcga ccgtgacctg acgttctaca agatatacat 4320 cgatgtgtac gatggccgcg acaagctatt cagtttcgat catctggact tggtaaagat 4380 tgggtatcag ttcgaagtgt tgagcgactg cgtatatcga gtgacttggg aagaaacaga 4440 aaggatcttc acgtgcggcc aaagagaaaa gccatcagat atattgcagc aaaacatgcc 4500 tgtccatatc tagaccgctc gccacagcgt cgaagctagc gcagtctgcg tagaccgagg 4560 aagcggaaca tgtaggacac caaaccttgg cacttccaca ccgaacttaa tcatggggct 4620 ctatacgagc ccttttttat tacgtgcgcg gtattgcgag cattttggga ggggcccgct 4680 ttgcgggagg gacctaaaag cggagcaaac ccccgaatct gtattacggg ggtaaattcc 4740 tactcagtac taaccttgtg tgccgccccc tctcaaaaaa cgaaataaga atgctcaatt 4800 gaaaatgaac agatatagca ttaaagtttt ctaattcgct caacattatt agtgtcggat 4860 tcgtcaaagt tatcttcttt tcctaataat tcattttcaa ttttacttat cgtttcattc 4920 agataggttg tcaaatcgtc cgtcgctttc ttacttttat tgaggtttcc tagcattccg 4980 acatattttt ttccgtcact gcctatcctt actcccaaga gttcttctat agattttata 5040 ttcatcagca catccataac tgcgttttgt cgagaaatgg aattctcttt ttgggctagg 5100 tacttccttt ctctttcagc gatttcattt tttagctgaa gtattttttc atttaaatct 5160 tccgcatttc gctcatataa ggctatttct tctttttttt cggctatgct atgttttaac 5220 attgaccttt cttgttccca cccttccagt tctttatcga ctaacttctc ttgatatgcc 5280 ttggttgatt tatattctaa agctaatatt tttgcttgag acctatatgt aattgccttt 5340 cgcttttctc tagcattaat tacaagctta tcaattaaaa cttgtagcca gtctgccata 5400 actatgtata cgagagctaa agccatgcat tgtaggagaa gtgtataatc aaagtgatag 5460 gactctagca tagttaattt tttgtcgggg ctgacaataa aaaatttagc tatcattgga 5520 acgttggcca ctagatacat taaggacgat atccccaaaa atgggcttct catcctagat 5580 aaaatggcat caagaaactc tttcattttt caaacctata taaaatgcga ttttcgtata 5640 gtaacaggtg ttcatattac ttgttaaaaa atgccgctaa aatgcggcac ttatactaac 5700 tgatcatttt tgctattgac cttgcaatct ttaacaactt tgctgtcgtt ttaagatcta 5760 gctcagagct tatttcaatg agagctatcc ctgttaggat ttgttgagca cttacttttt 5820 gtcctgtggg taactctatt ttgtcataat gcattttgaa acctctccat tgctcgtggg 5880 gacttagctc tctgccctta ctcattcgca taagcctttt gcactcagga ggaatggttt 5940 tccctttatc ccattctttg accgttctca cagtttttaa acaaagttca gcagcttgtt 6000 cgacggataa accacattca aattcacgaa aaatataatt tttagtcatt tcgtgatact 6060 tcattgaata gtccctcaaa agagagacat tttataggac tagcatatgc aatcgcattc 6120 aacataagca gatataatgc gcactgtaat agtggttcct gtggacttgc aatcactaaa 6180 gccaatccgg cacaaactat tgaaatgctt gataatccaa gtccgttata cttttttgca 6240 atgctttccc acatgctttt tatagctggg ttttcattgc gatcagcgtg acatcctagc 6300 aacgcaatct ccgggtctat acctgcgccg tgtgctagaa aaactgcttc ttcatcagta 6360 agttgtctaa cacctttgcg aattttacta atcttcggcg ggtctagatt caaatcgtgc 6420 gcaacctgct tatcttgtac gtagtttttc gcctttttgt aggcgttaat tagttcagct 6480 gtgtacataa gaacctccat ttcttctcat tgtagccaca aagttgccat aaatcgcatc 6540 ttgcagttgc cattctttgc aactacgatt gccataaatc gcaattggtc aggtgtcatt 6600 atgcttacgg aacaaatcaa atcccttatc gaaaatgaat gtgcgcttag tcctcgactt 6660 actggcgtgt tcttccgtaa gcacctgaat caatctatgt atggtgatga cggccagctc 6720 actgagttcg ccattcaatg ccatcactac tttaacgaac tcaaacgcgc tgcagagcaa 6780 aaagcctttc atgctcgtct tgaacaatgt cgtcttcaac acgaacaaca gcaagaatca 6840 gttaaacgcg ttaatcagtc cgtaaagaaa tccgctaacc aatcacgagc tcagttcatt 6900 ggctctctgc gctttgaact caatcaaggc gttctgatgg ttcgctcggt ttctcgttca 6960 atgccaactc caaccaaatg gattcgtcgt tatctcaaga aacttggcgt acgtcgcctt 7020 ggtaagtctt tgtctaacgg tgttttattt actggtgacg ctgtcactga aatcctcgct 7080 tgtttgcaag ctaaacaggc taagaacgac accataccgt ttgaactgaa tatcagcgcc 7140 ctgccgattt tagcttggtt tcgttcgcca ctcagccttg gcactccaac attggaggct 7200 cagtgctcat gaacgaagct caaatcatct attacgactt gctacctgac tacacggtgt 7260 ctgtgttggt caaaggttgc gacgaatggg atttacttaa atccatgtct catcttgagt 7320 cttgggcttc gtctcagttc gcttcttatg agttggtgtc catcaccaac acgaccgttg 7380 aacaacgtat caatatgggg gtgttcgatg actactgcaa ctaacatcct taaaagtttc 7440 gatgagcaaa gcgttcatat tgattacctg tgttttacgt ttgccgtgaa agacttacgt 7500 cattgtcacg atgcggttcg tcgattgcac aagcatgagg aatacaaagg ctttgccaaa 7560 tctggactgt tacagcgtca ctgtcgtgcg cctaagttcc ctgctccacc tgtgtttaat 7620 ccgacggtcg ctcagacttc cgacgagatt gatgcgtaca acaaagcgtt tgatatctgc 7680 tatcgcaatt acttagaaga ttgcttgcgc atcttcacca atcaagtgct tggtttgtcg 7740 ctgtctgcgc ctcgcggttt gggtttccag ttctacaccg aatccatgaa actgacttcg 7800 ccagatggtg aggacttctg cggcttcgtt ggtatcggcg gtaacaatga cacggtgcat 7860 ttccaaatca acggaacggg atgcaagcat gtatttgccc gtcgtcctac gtggtcgcta 7920 catgactggc tgaccaatgt gcttggtgtg caaactctgg cgcgt 7965 //