Dbfetch

Dbfetch

ID   Z46777; SV 1; linear; mRNA; STD; VRT; 1922 BP.
XX
AC   Z46777;
XX
DT   23-NOV-1994 (Rel. 41, Created)
DT   27-JUN-2018 (Rel. 137, Last updated, Version 6)
XX
DE   B.rerio UBA*01 class I MHC mRNA.
XX
KW   MHC class I.
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
XX
RN   [2]
RP   1-1922
RA   O'Huigin C;
RT   ;
RL   Submitted (22-NOV-1994) to the INSDC.
RL   to the INSDC. O'hUigin C., Max-Planck-Institute, Corrensstr.42, Tuebingen,
RL   Germany.
XX
RN   [3]
RP   1-1922
RA   Takeuchi H, Figueroa F, O'Huigin C, Klein J;
RT   "Cloning and characterization of class I Mhc genes of the zebrafish,
RT   Brachydanio rerio";
RL   Immunogenetics 42(2):77-84(1995).
XX
DR   MD5; b995059a8a91932468320b28b01d3ee5.
DR   IMGT/LIGM; Z46777.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1922
FT                   /organism="Danio rerio"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7955"
FT   5'UTR           1..73
FT   CDS             74..1120
FT                   /codon_start=1
FT                   /gene="UBA*01"
FT                   /standard_name="Mhc-UBA"
FT                   /db_xref="GOA:Q31365"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="InterPro:IPR037055"
FT                   /db_xref="UniProtKB/TrEMBL:Q31365"
FT                   /db_xref="ZFIN:ZDB-GENE-990415-145"
FT                   /protein_id="CAA86732.1"
FT                   /translation="MQSLIGLLLVVCLQYASGATHSWKAYYTGTTGLTEFPEFVALNLI
FT                   DDQLMGYFDSKTNRFKSQFQWMEDNLGKEYDEQQTNILLGYPEVFKNNIKVVMERFNQT
FT                   QGVHTFQFMYGCEMDDDGNKQVHWQIGYDGEDFISLDKKTLTWTAANSQAMTTKVKWDS
FT                   TGAEANYWKGYLENECIEWVQKYVGYGKDTLERKVSPQVSLLQKSSSSPVVCHVTGFYP
FT                   SGLKISWQRNGQDHDEDVELGELIPNEDGTYQRTSTLNVKPEEWKKDKFSCVVEHQSKT
FT                   INSILTEDEIRTNNPTALLGIIIGIVVAAVLLVAIAVAGFVVYRRHKGFKPVPQNTSDG
FT                   GSDNSSRT"
FT   3'UTR           1121..1922
XX
SQ   Sequence 1922 BP; 609 A; 322 C; 409 G; 581 T; 1 other;
     aagaggacaa tcgcacttgg ggatttgtaa agcagagaag tagttcttct gaatctcgta        60
     aaaaacagaa aaaatgcagt cgctaatagg tctgctgcta gtcgtctgtc tacagtatgc       120
     tagtggtgca acccacagct ggaaagccta ttacactgga acaactgggt tgactgagtt       180
     tccagagttt gtggcactga atctcataga tgatcagttg atggggtact tcgacagcaa       240
     gaccaaccgc tttaagagcc aattccagtg gatggaagat aatctcggga aagaatatga       300
     tgagcaacaa actaacattc tactgggcta tcctgaagta ttcaagaaca acattaaagt       360
     tgtgatggag cgcttcaacc aaacacaagg tgttcacacc ttccagttca tgtacggctg       420
     tgagatggat gatgatggca acaaacaagt acattggcag attggctatg atggagagga       480
     cttcatcagt ttggataaaa aaacgctcac ctggactgct gctaattctc aagctatgac       540
     taccaaggtt aaatgggatt ccactggagc agaggcaaat tactggaaag gatatctgga       600
     gaatgaatgc attgagtggg tgcagaagta tgtgggctat gggaaggaca ctttggagag       660
     aaaagtctct cctcaggtgt ctctgctgca gaaatcttct tcttctccag tcgtgtgtca       720
     tgttacaggc ttttacccca gtggtttaaa gatctcctgg cagagaaacg gacaagatca       780
     tgatgaggat gtggagcttg gtgaacttat cccaaatgag gacggaacct accagagaac       840
     gagcactctg aatgttaaac ctgaagagtg gaagaaggac aagttcagct gtgtggtgga       900
     gcatcagagc aaaactatca acagtattct cactgaagac gaaatcagaa ctaacaatcc       960
     tactgccctc cttggcatca taattggcat tgtagtcgca gctgttctgc tggtagccat      1020
     tgctgttgct gggtttgtgg tctatcgaag acacaaagga tttaagcctg ttccccaaaa      1080
     cacatctgat gggggatcag acaactcatc tcgtacataa agatataagt gtggaccaga      1140
     tgaatgcaag agatgaagct gaagaaaaaa agtgacatcc atccttctcc tgctgtccat      1200
     cttgcattgg aagctgncat aaacatgtag aacatgtaga caaatttatc acggattaat      1260
     cttttgggat tcactttcta aaaagttaat ttttcttcac actttctgtt catctttagt      1320
     tttgagaaac atggcaatga ttaccaaacc aaaattacag atatatattt ttattttgag      1380
     actatgaaga atgcaagatt gcaaattatt gatttggatg atttgtaaaa acctttttca      1440
     tgtgttttaa agagattttc ttggggtaaa agggggaaaa gctgcttaca tgtaattgaa      1500
     aatgctgtat tgtgcttacc tgcttcaaca tttaaataat tttaaaatga tatattgatc      1560
     acatttagta gaccttttcc atcagttaca tcagatgaca tgatgtattt gcttttttat      1620
     ttcttgtaga ggttaatagg tttattcttc ttgctgtttg tttccttcat ttttgtttca      1680
     aatgttttga ggtgaaatgc tgtactgcat aataatagat tatttttaaa caattgtaaa      1740
     tattgaacta aacttaaatg tgtgaacagt ataacacaaa atagaattgt ttcttgtggt      1800
     ttgaggtatc tacgtttaaa ttaagtcagg cttacataaa tatttgttta taagggttaa      1860
     cttgtcatgt gcttttgatt ctttttaaaa taaataaacc tcacaaaaga aaaaaaaaat      1920
     aa                                                                     1922
//