Dbfetch
ID X52916; SV 1; linear; genomic DNA; STD; MUS; 2014 BP. XX AC X52916; X52597; XX DT 21-FEB-1991 (Rel. 27, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE M. musculus H-2L(q) gene for H-2L(q) antigen. 3' partial cds. XX KW H-2L(q) gene; major histocompatibility complex class I; KW transmembrane protein; transplantation antigen. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-2014 RA Lee D.R.; RT ; RL Submitted (10-APR-1990) to the INSDC. RL D.R. Lee, UNIVERSITY OF MISSOURI-COLUMBIA, DEPARTMENT OF MOLECULAR RL MICROBIOLOGY &, IMMUNOLOGY, M642 MEDICAL SCIENCE BUILDING, COLUMBIA, RL MISSOURI 65212, USA XX RN [2] RA Lee D.R.; RT ; RL Submitted (30-APR-1990) to the INSDC. RL Lee D.R., University of Missouri-Columbia, Department of Molecular RL Microbiology & Immunology, M642 Medical Science Building, Columbia, RL Missouri 65212, USA. XX RN [3] RX DOI; 10.1084/jem.171.6.2043. RX PUBMED; 2351932. RA Rubocki R.J., Lee D.R., Lie W.R., Myers N.B., Hansen T.H.; RT "Molecular evidence that the H-2D and H-2L genes arose by duplication. RT Differences between the evolution of the class I genes in mice and humans"; RL J. Exp. Med. 171(6):2043-2061(1990). XX DR MD5; bf1390fcbb3de5da61253ab806c7dc61. DR IMGT/LIGM; X52916. XX CC antigen structure: Lq. beta2-microglobulin. CC for 5' region see X14091 or M36950. XX FH Key Location/Qualifiers FH FT source 1..2014 FT /organism="Mus musculus" FT /mol_type="genomic DNA" FT /db_xref="taxon:10090" FT intron <1..504 FT /number=3 FT CDS join(505..780,908..1024,1203..1235,1409..1447,1587..1591) FT /partial FT /codon_start=3 FT /gene="H-2L(q) " FT /product="H-2L(q) antigen" FT /db_xref="GOA:O19453" FT /db_xref="InterPro:IPR003006" FT /db_xref="InterPro:IPR003597" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR010579" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="UniProtKB/TrEMBL:O19453" FT /protein_id="CAA37104.1" FT /translation="SPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDM FT ELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEPPPSTDSYMVIV FT AVLGVLGAMAIIGAVVAFVMKRRRNTGGKGGDYALAPGSQSSEMSLRDCKA" FT mat_peptide join(505..780,908..1024,1203..1235,1409..1447,1587..1588) FT /partial FT /gene="H-2L(q) " FT /product="H-2L(q) antigen" FT exon 505..780 FT /number=4 FT intron 781..907 FT /number=4 FT exon 908..1024 FT /number=5 FT intron 1025..1202 FT /number=5 FT exon 1203..1235 FT /number=6 FT intron 1236..1408 FT /number=6 FT exon 1409..1447 FT /number=7 FT intron 1448..1586 FT /number=7 FT exon 1587..1591 FT /number=8 XX SQ Sequence 2014 BP; 447 A; 485 C; 522 G; 560 T; 0 other; ggatcctgtg tgacacacct gtaccttgtc ctccagagtc aggggcaggg agtcattttc 60 tctggctaca gactttgtga tggctgttca ctcggactga cagttaacgt tggtcagcaa 120 gatgaccaca gtggttgagt ctcagtggtg ggacccttcc agtagcatat gcccctaatt 180 ttgatatgaa ctcaaacaga tattaaatta cttattttcc attccctatt ccattctgtg 240 actatctctc tcatgctatt gaacatcaca taaggatggc catgttcacc cactggctca 300 tgtggattcc ctcttagctt ctttgtccca aaagaaaatg tgcagtcctg tgctgagggg 360 accagctctg cttttggtca ctagtgcaat gacagtgtag tgtcaaatag acacatagtt 420 cactctcatc attgatttaa ctgagtcttg tgtagatttc agtttgtctt gttaattgtg 480 gaatttctta aatcttccac acagattccc caaaggcaca tgtgacccat caccccagat 540 ctaaaggtga agtcaccctg aggtgctggg ccctgggctt ctaccctgct gacatcaccc 600 tgacctggca gttgaatggg gaggagctga cccaggacat ggagcttgtg gagaccaggc 660 ctgcagggga tggaaccttc cagaagtggg catctgtggt ggtgcctctt gggaaggagc 720 agaattacac atgccgtgtg taccatgagg ggctgcctga gcccctcacc ctgagatggg 780 gtaaggaggg tgtgggtgca gagctggggt cagggaaagc tggagccttc tgcagaccct 840 gagctggtca gggatgagag ctggggtcat aaccctcacc ttcatttcct gtacctgtcc 900 ttcccagagc ctcctccgtc cactgactct tacatggtga tcgttgctgt tctgggtgtc 960 cttggagcta tggccatcat tggagctgtg gtggcttttg tgatgaagag aaggagaaac 1020 acaggtaaga aagggcaggg tctgagtttt ctctcagcct cctttagaag tgtgctctgc 1080 tcattaatgg ggaacacagc cacaccccac attgctactg tctctaactg ggtctgctgt 1140 cagttctggg aatttccagt gtcaagatct tccttgaact ctcacagctt ttcttttcac 1200 aggtggaaaa ggaggggact atgctctggc tccaggttag tgtggggaca ggattgttct 1260 gggggacatt ggagtgaagt tggagatgat gggagctctg ggaatccata atagctcctc 1320 cagagaaatc ttctaggggc ctgagttgtg ccatgaagtg aatacattca tgtacatatg 1380 catatacatt tgttttgttt taccctaggc tcccagagct ctgaaatgtc tctccgagat 1440 tgtaaaggtg acactctagg gtctgattgg ggaggggcaa tgtggacatg attgggtttc 1500 agggactccc agaatctcct gagagtgagt ggtgggttgc tggaatgttg tcttcacagt 1560 gatggttcat gactctcatt ctctagcgtg aagacagctg cctggactgt actgagtgac 1620 agacgatgtg ttcaggtctc tcctgtgaca tccagagccc tcagttctct ttacacaaca 1680 ttgtctgatg ttccctgtga gcttgggttc agtgtgaaga actgtggagc ccagcctgcc 1740 ctgcacacca ggaccctatc cctgcactgc cctgtgttcc cttccatagc caaccttgct 1800 gctccagtca aacactgggg gacatctgca tcctgtaagc tccatgctac cctgagctgc 1860 agctcctcac ttccacactg agaataataa tttgaatgtg ggtggctgga gagatggctc 1920 agcgctgact gctcttccaa aggtcctgag ttcaaatccc agcaaccaca tggtggctca 1980 caaccatctg taatggtatc taacaccctc ttct 2014 //