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EBI Dbfetch

ID   AH005103; SV 2; linear; genomic DNA; STD; HUM; 646 BP.
XX
AC   AH005103; U88838-U88839;
XX
DT   01-JUL-2011 (Rel. 109, Created)
DT   01-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Homo sapiens leukocyte antigen (HLA-Cw) gene, partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-646
RA   Bettinotti M.P., Simonis T.B., Barracchini K.C., Marincola F.M.;
RT   "HLA-Cw0202 variant, exon2";
RL   Unpublished.
XX
RN   [2]
RP   1-646
RA   Bettinotti M.P., Simonis T.B., Barracchini K.C., Marincola F.M.;
RT   ;
RL   Submitted (06-FEB-1997) to the INSDC.
RL   HLA Laboratory, DTM, Clinical Center, National Institutes of Health, 10
RL   Center Dr., Bldg. 10, Rm. 1c744., Bethesda, MD 20892-1184, USA
XX
CC   On or before Jun 30, 2011 this sequence version replaced
CC   gi:1857948, gi:1857949, gi:1857950.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..646
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /cell_type="fibroblast"
FT                   /tissue_type="lung"
FT                   /db_xref="taxon:9606"
FT   gene            1..646
FT                   /gene="HLA-Cw"
FT   CDS             join(<1..270,371..>646)
FT                   /codon_start=3
FT                   /gene="HLA-Cw"
FT                   /product="leukocyte antigen"
FT                   /note="Allele: HLA-CW*0202; major histocompatibility
FT                   complex; locus C"
FT                   /db_xref="GOA:O78215"
FT                   /db_xref="InterPro:IPR001039"
FT                   /db_xref="InterPro:IPR011161"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR027648"
FT                   /db_xref="UniProtKB/TrEMBL:O78215"
FT                   /protein_id="AAB48516.1"
FT                   /translation="SHSMRYFYTAVSRPSRGEPHFIAVGYVDDTQFVRFDSDAASPRGE
FT                   PRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGCDLGP
FT                   DGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGEC
FT                   VEWLRRYLENGKETLQRA"
FT   exon            1..270
FT                   /gene="HLA-Cw"
FT                   /number=2
FT                   /note="Allele: HLA-CW*0202"
FT   gap             271..370
FT                   /estimated_length=unknown
FT   exon            371..646
FT                   /gene="HLA-Cw"
FT                   /number=3
FT                   /note="Allele: HLA-CW*0202"
XX
SQ   Sequence 646 BP; 110 A; 169 C; 198 G; 69 T; 100 other;
     gctcccactc catgaggtat ttctacaccg ctgtgtcccg gcccagccgc ggagagcccc        60
     acttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagtccaag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg       180
     accgggagac acagaagtac aagcgccagg cacagactga ccgagtgaac ctgcggaaac       240
     tgcgcggcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       300
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       360
     nnnnnnnnnn ggtctcacac cctccagagg atgtacggct gcgacctggg gcccgacggg       420
     cgcctcctcc gcgggtatga ccagtccgcc tacgacggca aggattacat cgccctgaac       480
     gaggacctgc gctcctggac cgccgcggac acggcggctc agatcaccca gcgcaagtgg       540
     gaggcggccc gtgaggcgga gcagtggaga gcctacctgg agggcgagtg cgtggagtgg       600
     ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcgg                      646
//


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