Dbfetch
ID OX222363; SV 1; linear; genomic DNA; STD; HUM; 11467 BP. XX AC OX222363; XX PR Project:PRJEB54667; XX DT 12-JUL-2022 (Rel. 144, Created) DT 14-APR-2023 (Rel. 144, Last updated, Version 2) XX DE Homo sapiens, HLA-DPB1 gene for MHC class II antigen, cell line DE DKMS-LSL_ID20414903_DPB1_1, allele HLA-DPB1*03:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (12-JUL-2022) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; 50aef1f10fcb2f0e1d4673f59cfaff87. XX FH Key Location/Qualifiers FH FT source 1..11467 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID20414903_DPB1_1" FT /db_xref="taxon:9606" FT exon 1..466 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /number=1 FT CDS join(367..466,5002..5265,9216..9497,10045..10155, FT 10485..10504) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH8780917.1" FT /translation="MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYVYQLRQECY FT AFNGTQRFLERYIYNREEFVRFDSDVGEFRAVTELGRPDEDYWNSQKDLLEEKRAVPDR FT VCRHNYELDEAVTLQRRVQPKVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQ FT EETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYICQVEHTSLDSPVTVEWKAQSDSA FT RSKTLTGAGGFVLGLIICGVGIFMHRRSKKVQRGSA" FT intron 467..5001 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /number=1 FT exon 5002..5265 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /number=2 FT intron 5266..9215 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /number=2 FT exon 9216..9497 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /number=3 FT intron 9498..10044 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /number=3 FT exon 10045..10155 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /number=4 FT intron 10156..10484 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /number=4 FT exon 10485..11467 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*03:new" FT /number=5 XX SQ Sequence 11467 BP; 3103 A; 2543 C; 2968 G; 2853 T; 0 other; taatccctgt agatgggcca gcagaatatt tgagatcacc ttcagagcaa agaaaacgca 60 taatctcccc aaacatcatg acttatctga ctggttaaaa tgagtatcac tgtctttcct 120 ccgtcatctt aagtgcatca caggctttat attttcagac ctttcatact aactttctgc 180 ctagtgagca atgactcata caaagctcag tgtccattgg ttcttttctc agactctgtc 240 caatcccagg gtcacagaag actacttggg ttcatggtct ctaatatttc aaacaggagc 300 tccctttagc gagtccttct tttcctgact gcagctcttt tcattttgcc atccttttcc 360 agctccatga tggttctgca ggtttctgcg gccccccgga cagtggctct gacggcgtta 420 ctgatggtgc tgctcacatc tgtggtccag ggcagggcca ctccaggtaa gagccgagct 480 gccattcttg gagggtctgg ctcagggaac aattcctagg ggacgttatc tttaagggat 540 caaattctga gacaggctgc gggggctcct gccctaaggc agtgtcctct cttcccagct 600 agagaaagag gttcatcccc tataggatag cttgctaccc tactggccta ttctctctcc 660 aaggacatgg gtacagtaaa cagagagagg tgcccagtgg tcagtatgct tgtctttggg 720 gaaaatggga ccaagaggtc ctggataacc ttggacagac aaggtttgca gagagagaag 780 ttggcaagtg caggctcctg ggcgtgttca cgtctgcatc cagcctggag gggactcagg 840 cagagagccc taagctggag tgtccaggct ctgaggatca ctgaggattc agtgctcacg 900 aagaatgcct cttattcccc agggtggagc aggagcccac atcccttgga caattaagga 960 gagaagggag ggagggggat aggttttagc ccctgaaggc attctcatta aaggtacttc 1020 tcccagcctc cccagaactt ggttagggta ctagagtggg ttgcgacttg taggaagaat 1080 gagatgaggt tgtgtgggtg catgacaggg attgagtgta ggttatcaga cagccaagga 1140 agcagtaacc aagtgaaaaa tctcttcttc ctgctgcctc cctgtggctg gtgtaatatt 1200 atggcatcta tgatccattg tttttctctc aggatactct caggatattt ctttttatat 1260 atatatatac tttaagttct agggtacatg tgcacaacgt gcaggtttgt tacatatgta 1320 tacatgtgcc atgttggtgt gctgcaccca ttaactcgtc atttacatta ggtatatttc 1380 ctaatgctat ccctcccccc tccccccacc ccacaacagg ccccggtgta tgatgttccc 1440 cttcctgtgt ccatgtgttc tcattgttca gttcccacct atgagtgaga acatgtggtc 1500 tttggttttt tgtccttgca atagtttgct gtgaatgatg gtttccagct tcctccatgt 1560 ccctacaaag gacatgaact catccttttt tatggctgca cagtattcca tggtgtatat 1620 gtgtgcattt tcttaatcca gtctatcact gatggacagt tgggttggtt ccaagtcttt 1680 gctattgtga atagtgccgc aataaacata tgtgtgcatg tgtctttata gcagcatgat 1740 ttataatcct ttgggtatat atccagtaat gggatggctg ggtcaaatgg tatttctagt 1800 tctagatctt tgaggaattg ccacaatgtc ttgagatacc atctcacacc agttaaaatg 1860 gcgatcatta aaaagtcagg aaacaacagg tgctggagag gatgtggaga aataggaaca 1920 cttttactct gttggtggga ctgtaaacta gttcaaccat tgtactctca ggacatttct 1980 agtccaaatt tacaccaaca ctctgagagg aaggactgca aagtaggtac cttagttttc 2040 cactgacttc cacttttcct gcttacaccc ttcctcctag acctctccac acccctccta 2100 ggacacacct agaaggtact gacatcatgt cacctcctca tctttcaggg tagcaaggtt 2160 ggaatctcct gaatacagcc cctcaagccc taaaacctct tatctattac cttgggttca 2220 ttgtccagga aggggaggag aacttgaact tgtagtcaca gaagggtgct gagaactaac 2280 cagcaggacg gctcagccct gggaactgca gaggggtgag gctggggaga gaggaggctg 2340 gagcagcact ggtgacactg aacagtgtca ggaggaagtg acggatgcag cgcccccatc 2400 ccataggcag agctgtcatg tgggatgagg gacagtgttg ggagccacca aggaaaccca 2460 gaggtggggg agcagagagc agaagggggc atgtgatgct gggcagtgaa agggaggacg 2520 ggcaaaggct gggttgaggt ttgtaggggg aatgagatga ggcagtggag ccatgtgaca 2580 gggactgagg gtagattact ggagctccct gcgtagaatg aatgttcaat caaaacctgc 2640 tggagggaga gctggagcca taggggagtg ggtaaagtgg gcagggctga ttccacaatt 2700 ccctgcatgc tcccccaact ccacacacat ccccaacctc aaacagggca caagaccaaa 2760 gggctgagga gccaggctat agcttaaaga ggctggggga gaaaagcttg gctgagacaa 2820 cccataggga gctagaggtt tttaatatat cctattctga ataagagacg aattcattca 2880 gatcagtggt ttcaaaccgt gctctgggca actcaattgc taagggttcc acaaacagga 2940 taaagtttct tatatacaaa aaaaatgaag gtttcaaatt acaccataaa acccctcatt 3000 gcttatgtct acttggcagg taaaattcca tttcaaaagt taaatgtact taaaaaatta 3060 cctaagactg ggtaaattaa aaaaattaaa tgttgcaaag aaaaaattca aaattcttat 3120 tcttgaatga aaaacgttct cttactggtg attgaggagg agaaacaaag actaacaaat 3180 gaaaatggga gaatccacac tcagagtggg gcaattgaac aggcaggggc ggatggatgg 3240 cagaggagga ggaatctgga ctcaaggagc tggggggccc tgggcctgga atttcagggt 3300 ctggcgccca aggcaccagg agaagaggca ggtcaggata tctgagtcaa gacctgggat 3360 cttgccttag caatgacact ggagactaaa ggtggactcc atggtgccct tgagcccagc 3420 cctaccccat ctccactatc ctctgccacc agctgtgcaa cttctgcaag gggtgaggtt 3480 aataaactgg agaagttaat ttgtggagca tgaaacagat gagcagaaca atcacagcac 3540 cttaatttcc ccagtgtgcc caagaacaga gcaggcctga agacactcaa acagaaacaa 3600 acatgtgccg tgtcactgat aattctgtgt agacacacac ctgccagaca ctgctcatgg 3660 cactccctag gaagaacagc atgtgggaaa ggctgccaaa attgttcatg taaaaattac 3720 atcaatgctg tcttcctcgg tgctgcctat gcagctggca gccatctctt cctccacatc 3780 atggcctccc tcagactcct catgaaggat aagatcctca aaaagaggac caacaagttc 3840 atgaggcacc aatcagactg aaatgtcaaa attaagcata actggcggaa acccagaggt 3900 cttaacagta gggttcgtag aaggtccaag ggccagatct tgatgcccaa cattgcttat 3960 gggagcaaca acaacaacaa aaaacacatg ctgcccagtg gcttccagaa gtttctggcc 4020 cacagcctca aggagctgaa agtgctgctg atgtgcaaca aatcttactg tgctgagatc 4080 gctcacaaaa tttcctccag aactgcaaag tcatcatgga aagagtcacc cagccggcca 4140 tcagagtcac caaccccagt accacggtgc acagctaaga aaatgagtag aaagttcatg 4200 tccacgtttt gtgtgtaaat aaaaccataa aaactgccaa aaaaaattac atcaatgcct 4260 ctaaacccaa aggactctac ccccacaggt ccctggttgt tgtggtgatt ttcattgtgt 4320 aaaatacttt ccacatcttt tgacaccaag tctttctgca gccatgtttg aaaattaact 4380 ttcaggctac agagtctttc ttataccaaa gttgaagaaa gttttaagaa atatatttct 4440 acatctccta catgcaaaac aacaggagca agttgaggaa ttctcaagaa actggtcgag 4500 aagagagagc gcttagctat ggaaaagaga aagaaggaag ggagggcttc ctggaggagg 4560 tggcatttga accaggactg acatcaggat ggaaatgtca gtcagggagt taagtagggg 4620 gagcagctcc gccctccacg tccccagctc ctcctgcccc tgttttttct cccagtgacc 4680 ccacgtgaaa cgtctccgcc tcctccagcc accagcagaa gggactgcct tcccctcagt 4740 gctcgcccct ccctagtgat cactcagtgc ccctgagctc attcttttca gtaaattctc 4800 tctctgcgtg gtgagaaaac aggcctggag aggctctgcg acccgcttag gaccacagaa 4860 ctcggtacta ggaaaactcc tattttaaaa tccagccctg ggtgggaaga tttgggaaga 4920 atcgttaata ttaagagaga gagggagaaa gaggattaga tgagagtggc gcctccgctc 4980 atgtccgccc cctccccgca gagaattacg tgtaccagtt acggcaggaa tgctacgcgt 5040 ttaatgggac acagcgcttc ctggagagat acatctacaa ccgggaggag ttcgtgcgct 5100 tcgacagcga cgtgggggag ttccgggcgg tgacggagct ggggcggcct gatgaggact 5160 actggaacag ccagaaggac ctcctggagg agaagcgggc agtgccggac agggtatgca 5220 gacacaacta cgagctggac gaggccgtga ccctgcagcg ccgaggtgag tgagggcttt 5280 gggccggcgg tcccagggca gccccgcggg cccgtgccca gggcgcagga gcagccgggt 5340 tggcctaagg gaccttagtg ccgggcggaa aggggacttt gggttgggga ttcatggggg 5400 gagcccatct ggagcttgtc aggggagcga gcgcggggac ctggactggg ctgagcatgg 5460 agtgaggagg acgagagcag agagaccccc gggacttcat caggcctggc agctgactgc 5520 atgtggggtg aaaaaaggaa gccacaggac agcgcacaag ggtatggtgt ggagatggag 5580 gtggagatgg cacagcaggc cacacagaga agaaacctac agggaggtag ctgggtttga 5640 ggtgcttgag gggcagatgg gtggtctgat gggcaggtag acagaagggt ctgcagccgg 5700 ggaggagact gagatacatg agaccatcca gggagagggg acccaggggg aagagcaaag 5760 gactggatcc tgggaactgg acagttgtga tttggccaag acagaaaagc ctgtgaaaga 5820 gaccaaaaaa acccaagtgc agtgtgagga gaggcccgca gagaagagtc ttggaagctg 5880 aggggaggtg acctcagcag cacagtggac agcggtgcca gtgacttggg aaggtcagaa 5940 aacagaagat ggaaagtggg tttggaaacc agggagacct ggggagagca ggttggccgc 6000 agcggcagga gctggaatgg gagggggtgc atgaggctga gtgtggcgca tcctcctcgg 6060 ggctgagatg gattttactt gtcttgggtt ccccacggct gtcacagggc agtgtctcag 6120 ttcattcgtc tttttccttc aggaagtctg ggtgtaaagg gatggagaga ggtgaggtgt 6180 gtgcagtaag aggatttctc aaggatggga caggaaggcc ttggagcttt ggcttcctcc 6240 tgtgaacttg tggggtgggg agcctggtgc accaacctga gggacttgag ggagtagtat 6300 caggatgtgg gattgagccc tggacctttt ttctagaaag aggaaaaaaa tgaagggagg 6360 aggaggagga agctggggag atcacacctt tgattttctt gttcctggaa agtgaaagga 6420 agttcacctg ctatgagtga gaaggtggac acactgggtg gggatgaggt gagtgacatg 6480 agcttaggaa agttgctgag gtaattggtt gagagaggtg ttcaaataaa agtaatgcaa 6540 ttggcaaaaa ctgttactaa gactttgtag aggcacaaat cagtgacacg gcagcatctt 6600 ctttcacagt aatcaactgc cagattgcag ggagccttga taccagccta aggagtgtga 6660 gtttctcctc taggcccaca ggtccccaac ctcacttctc cgaagactct cctggagatc 6720 atctgtgatg cgcagatacc cagactcact gccccgagac tcagattccc tgggtaggga 6780 ggtcggggga tctctgcttg taatcagctc cctagaggtt cccatgtagc cggataagta 6840 ttgtcagaac actgaagatt tttgaaaaat gaaaaagcga aggttggaga tgtgtcttca 6900 gaagactact aagggtgctg ggtagaggag ggaccagagg cagggaaatg aggtaggaaa 6960 ctgctattat ttgtcaggga aattgcaatc aagaaatgag ttagaacagg gaaaagacag 7020 aggcagggga gaggtggaag ggggaggaaa ggagtagtga caattccagg gtgtatgctc 7080 acccaaatct agaagtaatt gagcaaatgt tttctgggca ttagagaagg caactagaac 7140 aaacaggaat ccttgccttg gtgaaatgta tttgaactgg gtcagaaatg aggccattgg 7200 gtatcaagcc ttaactccag cgccccctgg aggtcgctga tgtggctcca ggctgacctg 7260 ctcctgtcaa agaatattga gcaagatgcc tctcatggaa tgttctggga ccttaaaaca 7320 gatacccaag tattccccct gatttcatgg ttcccagaag ctctatgggg aagaaattgt 7380 acgtaattca caactgagat ttagacataa gttgaatagt gtaatggacg ttgagttaac 7440 cgaggtaatg aagtagtgag acacaggtgc ccctgaaata aactcacatt gagggaagag 7500 gctgacaatg tggatcagtc tgtaaacaag gcaaaaatac aatagggagt aagggttgtg 7560 tgtcagttca agactgtact tttacctggc ccagcgccat gttggggtat ttgtgttctc 7620 caggaagtag aaaggaaaga actgagtgat tagggaccta gaagactaat ttgagacatt 7680 cctcttgatg aactgttctc tagggtagtc ctctgaaaga gctgttctct agtggatctc 7740 cctgaatgaa ctgttctcta ggagcacttg acccttttct gtgtttgttt tttgttttgt 7800 gtttgtgttt gtttttgaga caggttctcg ctctgtctcc caggctggag tgctgtggcg 7860 ccatcatgac tcactgcagc ctcaacctcc tgggctcaag tgatcctcct gcctcagcct 7920 cccatgtagc tagaactaca gatacatgta ccaccatgtc tggctaattt atttttcttt 7980 ttagagatgg gttctcacta tgttgcccag gctggtctcg aaaccctggg ctcaagtgat 8040 cctcacgcct cagcctccca aagtgctaag attataggca tgaccaccat gcctggcctt 8100 ttctgccttc cgagaaggaa aaaggtactg gtggcagaga tccaaaagaa aagttgccag 8160 tggcagtgtg gaaattgacc tgagaacaac agaacaagct ggggcacaaa tgcaaagatg 8220 cagagggagg caacatctgg ttatctgtga gaccttcatg ggacctgaag acacatcctt 8280 ttggaaaagg atgggatttc tactactcaa gcatgtaggg gctcaggata ttatgtaaat 8340 atgaagattt tgagtttttg taagtgaggt aaaaaaaata cctaggttat ttacagaata 8400 agacatgtca agctctcttc attttctttg tattttcatg aaataaaggt attagattaa 8460 caggccacca taatgccatt gtctgtatat cttaatttca agatattatt tgagtaattt 8520 ttgcatcctt tgtatcaaga tagaactttg aaaagacagg taatttcaca gttgattaaa 8580 tattctttgc ccaaattact tttggttaaa atttctccta tatgtgctac agagtgcaaa 8640 ctctgtctcc ctgccattcc gctatatact tactaattat tattttattc aagatcatgc 8700 atgctctact tgaaggtcta tcttttcagt gctaccctta cccactagcc taatcacatt 8760 atatctattt tcaacatcta ggaatcaatt acgtagtgaa catgcctaag aaataataat 8820 ctgggcagat gcagtggctc aggcctgtaa tcccagcact ttgagaggct gagcgggtgg 8880 atcacttgag gtcaggagtt ggtcaagtgc tcctagagaa ccagcctgac caacatggag 8940 aaaccttgtc tctactgata atacaaaaat tagccaggtg aggtggcagg cacctataat 9000 cccagctatt cgggaggctg aggaaggaga attgcttgaa cccctgaggt ggaggttgca 9060 gtgagccaat attgcgccac tgcattccag acttggcaac agagcgacac tccacctcaa 9120 caaaaagaaa gaaagagcga gattacgtct caaaaaagga aggaaggaag gacaatctca 9180 aatgctattt cattattttc cttccccact cgtagtccag cctaaggtga acgtttcccc 9240 ctccaagaag gggcccctgc agcaccacaa cctgcttgtc tgccacgtga cagatttcta 9300 cccaggcagc attcaagtcc gatggttcct gaatggacag gaggaaacag ctggggtcgt 9360 gtccaccaac ctgatccgta atggcgactg gaccttccag atcctggtga tgctggaaat 9420 gaccccccag cagggagacg tctacatctg ccaagtggag cacaccagcc tggacagtcc 9480 tgtcaccgtg gagtggagtg agtctctgat gaccgtctag accccacctc tgaagagcag 9540 gggactctct ggctctgggg tccactcatc ttatcttctg catctatacc ctggggccat 9600 gtccaaaccc catctttctt ctataccagc tcctgagcat agtttgaagc cagggcaatg 9660 gagacttcct gaccttggct taggggttcc tgaagattca tagttctccc ccttgtcaga 9720 gaatctaggg acactggctg atctcgaaac cctcacacac aggaactgac ctcacacata 9780 ggaacagttc tcttctttca gcattttagc ctcttctcag gcattttgag aggcaacttc 9840 tagaatcagc atttgccacc ttgttgaggt cacacccctg ttccggacat gagggtggct 9900 ctttctgaat ttcctcttag caagcttttt cccctgcact gtcttcatcc cgatattctg 9960 catcacgctc cagaatctca gacaggacat gagtagggat gcagctggtg gaggtgacac 10020 taaacctggg tctgtccttc ccagaggcac agtctgattc tgcccggagt aagacattga 10080 cgggagctgg gggcttcgtg ctggggctca tcatctgtgg agtgggcatc ttcatgcaca 10140 ggaggagcaa gaaaggtgag aaagcctgca aggtgagcgg gacttacctt cccctggcat 10200 attcacactt actccatgat gagggttcag acagaaaaga aatgtcagaa agctctagag 10260 accactgaaa tcagatagtc ggggaacaaa catgacctat ggcgagaggg ggatcccagg 10320 ctgggatctt aatgcagcca gatgcatgag gtcccaggtg ctcagactcc tgcggggcat 10380 ccattgagtg gtggtcaatg gaatttggtg ggatggaaat gtttctctaa ctatctgagg 10440 tggtttcaat ggctgaatac ataacctttc ctctttcatt tcagttcaac gaggatctgc 10500 ataaacaggt aatattcctg ctttgatttc cttggggggt gggttacagg aggatatgac 10560 tcttttctgt gcattgtaat actgaggctc ctccaggaag ggaatctcag gcatgaaccc 10620 ctctttcaac ctcggctctc gggtgagtgg ggaaaaagca ttgcacggct ccattgctga 10680 aggaagcaga gatcagttct gttctttatc agcctaagat gcagcctctc accataattt 10740 ttctctcctg gacttaaagg aaggaggcca gcaacctggg ataacttgtc ctttaccccc 10800 acagggttcc tgacctcacc gaaaagacta atgtgcctta gaacaagcat ttgctgtgtt 10860 ttgttagcac ctggttccag gacagaccct cagcttccca agaggatact gctgccaaga 10920 agttgctctg aagtcagttt ctatcgttct gctctttgat tcaaagcact gtttctctca 10980 ctgggcctcc aaccatgttc ccttcttctt agcaccacaa ataatcaaaa cccaacataa 11040 gtgtttgttt tcctttaaaa atatgcatca aatcgtctct cattactttt ctctgagggt 11100 tttagtaaac agtaggagtt aataaagaag ttcattttgg tttacacgta ggaaagaaga 11160 gaagcatgaa agtggagata tgttaactat tgtataatgt ggcctgttat acatgacact 11220 cttctgaatt gactgtattt cagtgagctg cccccaaatc aagtttagtg ccctcatcca 11280 tttatgtctc agaccgctat tcttaactat tcaatggtga gcagactgca aatctgcctg 11340 ataggacccg tattcccaca gcactaattc aacatatatc ttactgagag catgttttat 11400 cattaccatt aagaagttaa atgaacatca gaatttaaaa tcataaatat aatctaatac 11460 actttaa 11467 //