Dbfetch
ID OX222323; SV 1; linear; genomic DNA; STD; HUM; 11466 BP.
XX
AC OX222323;
XX
PR Project:PRJEB54667;
XX
DT 12-JUL-2022 (Rel. 144, Created)
DT 14-APR-2023 (Rel. 144, Last updated, Version 2)
XX
DE Homo sapiens, HLA-DPB1 gene for MHC class II antigen, cell line
DE DKMS-LSL_ID20215407_DPB1_1, allele HLA-DPB1*05:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (12-JUL-2022) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; c2e8db2ab467e853524b1f7c939f12fe.
XX
FH Key Location/Qualifiers
FH
FT source 1..11466
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID20215407_DPB1_1"
FT /db_xref="taxon:9606"
FT exon 1..466
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /number=1
FT CDS join(367..466,5001..5264,9215..9496,10044..10154,
FT 10484..10503)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAH8780877.1"
FT /translation="MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYLFQGRQECY
FT AFNGTQRFLERYIYNREELVRFDSDVGEFRAVTELGRPEAEYWNSQKDILEEKRAVPDR
FT MCRHNYELDEAVTLQRRVQPKVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQ
FT EETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYICQVEHTSLDSPVTVEWKAQSDSA
FT RSKTLTGAGGFMLGLIICGVGIFMHRRSKKVQRGSA"
FT intron 467..5000
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /number=1
FT exon 5001..5264
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /number=2
FT intron 5265..9214
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /number=2
FT exon 9215..9496
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /number=3
FT intron 9497..10043
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /number=3
FT exon 10044..10154
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /number=4
FT intron 10155..10483
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /number=4
FT exon 10484..11466
FT /gene="HLA-DPB1"
FT /allele="HLA-DPB1*05:new"
FT /number=5
XX
SQ Sequence 11466 BP; 3100 A; 2538 C; 2975 G; 2853 T; 0 other;
taatccctgt agatgggcca gcagaatatt tgagatcacc ttcagagcaa agaaaacgca 60
taatctcccc aaacatcatg acttatctga ctggttaaaa tgagtatcac tgtctttcct 120
ccgtcatctt aagtgcatca caggctttat attttcagac ctttcatact aactttctgc 180
ctagtgagca atgactcata caaagctcag tgtccattgg ttcttttctc agactctgtc 240
caatcccagg gtcacagaag actacttggg ttcatggtct ctaatatttc aaacaggagc 300
tccctttagc gagtccttct tttcctgact gcagctcttt tcattttgcc atccttttcc 360
agctccatga tggttctgca ggtttctgcg gccccccgga cagtggctct gacggcgtta 420
ctgatggtgc tgctcacatc tgtggtccag ggcagggcca ctccaggtaa gagccgagct 480
gccattcttg gagggtctgg ctcagggaac aattcctagg ggacgttatc tttaagggat 540
caaattctga gacaggctgc gggggctcct gccctaaggc agtgtcctct cttcccagct 600
agagaaagag gttcatcccc tataggatag cttgctaccc tactggccta ttctctctcc 660
aaggacatgg gtacagtaaa cagagagagg tgcccagtgg tcagtatgct tgtctttggg 720
gaaaatggga ccaagaggtc ctggataacc ttggacagac aaggtttgca gagagagaag 780
ttggcaagtg caggctcctg ggcgtgttca cgtctgcatc cagcctggag gggactcagg 840
cagagagccc taagctggag tgtccaggct ctgaggatca ctgaggattc agtgctcacg 900
aagaatgcct cttattcccc agggtggagc aggagcccac atcccttgga caattaagga 960
gagaagggag ggagggggat aggttttagc ccctgaaggc attctcatta aaggtacttc 1020
tcccagcctc cccagaactt ggttagggta ctagagtggg ttgcgacttg taggaagaat 1080
gagatgaggt tgtgtgggtg catgacaggg attgagtgta ggttatcaga cagccaagga 1140
agcagtaacc aagtgaaaaa tctcttcttc ctgctgcctc cctgtggctg gtgtaatatt 1200
atggcatcta tgatccattg tttttctctc aggatactct caggatattt ctttttatat 1260
atatatatac tttaagttct agggtacatg tgcacaacgt gcaggtttgt tacatatgta 1320
tacatgtgcc atgttggtgt gctgcaccca ttaactcgtc atttacatta ggtatatttc 1380
ctaatgctat ccctcccccc tccccccacc ccacaacagg ccccggtgta tgatgttccc 1440
cttcctgtgt ccatgtgttc tcattgttca gttcccacct atgagtgaga acatgtggtc 1500
tttggttttt tgtccttgca atagtttgct gtgaatgatg gtttccagct tcctccatgt 1560
ccctacaaag gacatgaact catccttttt tatggctgca cagtattcca tggtgtatat 1620
gtgtgcattt tcttaatcca gtctatcact gatggacagt tgggttggtt ccaagtcttt 1680
gctattgtga atagtgccgc aataaacaca tgtgtgcatg tgtctttata gcagcatgat 1740
ttataatcct ttgggtatat acccagtaat gggatggctg ggtcaaatgg tatttctagt 1800
tctagatcct tgaggaattg ccacaatgtc ttgagatacc atctcacacc agttaaaatg 1860
gcgatcatta aaaagtcagg aaacaacagg tgctggagag gatgtggaga aataggaaca 1920
cttttactct gttggtggga ctgtaaacta gttcaaccat tgtactctca ggacatttct 1980
agtccaaatt tacaccaaca ctctgagagg aaggactgca aagtaggtac cttagttttc 2040
cactgacttc cacctttcct gcttacaccc ttcctcctag acccctccac acccctccta 2100
ggacacacct agaaggtact gacatcatgt cacctcctca tctttcaggg tagcaaggtt 2160
ggaatctcct gaatacagcc cctcaagccc taaaacctct tatctattac cttgggttca 2220
ttgtccagga aggggaggag aacttgaact tgtagtcaca gaagggtgct gagaactaac 2280
cagcaggacg gctcagccct gggaactgca gaggggtgag gctggggaga gaggaggctg 2340
gagcagcact ggtgacactg aacagtgtca ggaggaggtg acggatgcgg catccccatc 2400
ccataggcag agctgtcatg tgggatgagg gacagtgttg ggagccacca aggaaaccca 2460
gaggtggggg agcagagagc agaagggggc atgtgatgct gggcagtgaa agggaggaca 2520
ggcaaaggct gggttgaggt ttgtaggggg aatgagatga ggcagtggag ccatgtgaca 2580
gggactgagg gtagattact ggagctccct gcgtagaatg aatgttcaat caaaacctgc 2640
tggagggaga gctggagcca taggggagtg ggtaaagtgg gcagggctga ttccacaatt 2700
ccctgcatgc tcccccaact ccacacacat ccccaacctc aaacagggca caagaccaaa 2760
gggctgagga gccaggctat agcttaaaga ggctggggga gaaaagcttg gctgagacaa 2820
cccataggga gctagaggtt tttaatatat cctattctga ataagagacg aattcattca 2880
gatcagtggt ttcaaaccgt gctctgggca actcaattgc taagggttcc acaaacagga 2940
taaagtttct tatatacaaa aaaaatgaag gtttcaaatt acaccataaa acccctcatt 3000
gcttatgtct acttggcagg taaaattcca tttcaaaagt taaatgtact taaaaaatta 3060
cctaagactg ggtaaattaa aaaaattaaa tgttgcaaag aaaaaattca aaattcttat 3120
tcttgaatga aaaacgttct cttactggtg attgaggagg agaaacaaag actaacaaat 3180
gaaaatggga gaatccacac tcagagtggg gcaattgaac aggcaggggc ggatggatgg 3240
cagaggagga ggaatctgga ctcaaggagc tggggggctc tgggcctgga attttagggt 3300
ctggggccca aggcaccagg agaagaggca ggtcaggata tctgagtcaa gacctgggat 3360
cttgccttag caatgacact ggagactaaa ggtggactcc atggtgccct tgagcccagc 3420
cctaccccat ctccactatc ctctgccacc agctgtgcaa cttctgctag gggtgaggtt 3480
aataaactgg agaagttaat ttgtggagca tgaaacagat gagcagaaca atcacagcac 3540
cttaatttcc ccagtgtgcc caagaacaga gcaggcctga agacactcaa acagaaacaa 3600
acatgtgccg tgtcactgat aattctgtgt agacacacac ctgccagaca ctgctcatgg 3660
cactccctag gaagaacagc atgtgggaaa ggctgccaaa attgttcatg taaaaattac 3720
atcaatgctg tcttcctcgg tgctgcctat gcagctggca gccatctctt cctccacatc 3780
atggcctccc tcagactcct catgaaggat aagatcctca aaaagaggac caacaagttc 3840
atgaggcacc aatcagactg aaatgtcaaa attaagcata actggcggaa acccagaggt 3900
cttaacagta gggttcgtag aaggtccaag ggccagatct tgatgcccaa cattgcttat 3960
gggagcaaca acaacaacaa aaaacacatg ctgcccagtg gcttccagaa gtttctggcc 4020
cacagcctca aggagctgaa agtgctgctg atgtgcaaca aatcttactg tgctgagatc 4080
gctcacaaaa tttcctccag aactgcaaag tcatcatgga aagagtcacc cagccggcca 4140
tcagagtcac caaccccagt accagggtgc acagctaaga aaatgagtag aaagttcatg 4200
tccacgtttt gtgtgtaaat aaaaccataa aaactgccaa aaaaattaca tcaatgcctc 4260
taaacccaaa ggactctacc cccacaggtc cctggttgtt gtggtgattt tcattgtgta 4320
aaatactttc cacatctttt gacaccaagt ctttctgcag ccatgtttga aaattaactt 4380
tcaggctaca gagtctttct tataccaaag ttgaagaaag ttttaagaaa tatatttcta 4440
catctcctac atgcaaaaca acaggagcaa gttgaggaat tctcaagaaa ctggtcgaga 4500
agagagagcg cttagctatg gaaaagagaa agaaggaagg gagggcttcc tggaggaggt 4560
ggcatttgaa ccaggactga catcaggatg gaaatgtcag tcagggagtt aagtaggggg 4620
aggagctccg ccctccacgt ccccagctcc tcccgcccct gttttttctc ccagtgaccc 4680
cacgtgaaac gtctccgcct cctccagcca ccagcagaag ggactgcctt cccctcagtg 4740
ctcgcccctc cctagtgatc actcagtgcc cctgagctca ttcttttcag taaattctct 4800
ctctgcgtgg tgagaaaaca ggcctggaga ggctctgcga cccgcttagg accacagaac 4860
tcggtactag gaaaactcct attttaaaat ccagccctgg gtgggaagat ttgggaagaa 4920
tcgttaatat tgagagagag agggagaaag aggattagat gagagtggcg cctccgctca 4980
tgtccgcccc ctccccgcag agaattacct tttccaggga cggcaggaat gctacgcgtt 5040
taatgggaca cagcgcttcc tggagagata catctacaac cgggaggagc tcgtgcgctt 5100
cgacagcgac gtgggggagt tccgggcggt gacggagctg gggcggcctg aggcggagta 5160
ctggaacagc cagaaggaca tcctggagga gaagcgggca gtgccggaca ggatgtgcag 5220
acacaactac gagctggacg aggccgtgac cctgcagcgc cgaggtgagt gagggctttg 5280
ggccgggggt cccagggcag ccccgcgggc ccgtgcccag ggcgcaggag cagccgggtt 5340
ggcctaaggg accttagtgc cgggcggaaa ggggactttg ggttggggat tcatgggggg 5400
agcccatctg gagcttgtca ggggagcgag cgcggggacc tggactgggc tgagcatgga 5460
gtgaggagga cgggagcaga gagaccccgg ggacttcatc aggcctggca gctgactgca 5520
tgtggggtga aaaaaggaag ccacaggaca gcgcacaagg gtatggtgtg gagatggagg 5580
tggagatggc acagcaggcc acacagagaa gaaacctaca gggaggtagc tgggtttgag 5640
gtgcttgagg ggcagatggg tggtctgatg ggcaggtaga cagaagggtc tgcagccggg 5700
gaggagactg agatacatga gaccatccag ggagagggga cccaggggga agagcaaagg 5760
actggatcct gggaactgga cagttgtgat ttggccaaga cagaaaagcc tgtgaaagag 5820
accaaaaaaa cccaagtgca gtgtgaggag aggcccgcag ggaagagtct tggaagctga 5880
ggggaggtga cctcagcagc acagtggaca gcggtgccag tgacttggga aggtcggaaa 5940
acagaagatg gaaagtgggt ttggaaacca gggagacctg gggagagcag gttggccgca 6000
gcggcaggag ctggaatggg agggggtgca tgaggctgag tgtggcgcat cctcctcggg 6060
gctgagatgg attttacttg tcttgggttc cccacggctg tcacagggca gtgtctcagt 6120
tcattcgtct ttttccttca ggaagtctgg gtgtaaaggg atggagagag gtgaggtgtg 6180
tgcagtaaga ggatttctca aggatgggac aggaaggcct tggagctttg gcttcctcct 6240
gtgaacttgt ggggtgggga gcctggtgca ccaacctgag ggacttgagg gagtagtatc 6300
aggatgtggg attgagccct ggaccttttt tctagaaaga ggaaaaaaat gaagggagga 6360
ggaggaggaa gctggggaga tcacaccttt gattttcttg ttcctggaaa gtgaaaggaa 6420
gttcacctgc tatgagtgag aaggtggaca cactgggtgg ggatgaggtg agtgatatga 6480
gcttaggaaa gttgctgagg taattggttg agagaggtgt tcaaataaaa gtaatgcaat 6540
tggcaaaaac tgttactaag actttgtaga ggcacaaatc agtgacatgg cagcatcttc 6600
tttcacagta atcaactgcc agattgcagg gagccctgat accagcctaa ggagtgtgag 6660
tttctcctct aggcccacag gtccccaacc tcactcctcc gaagactctc ctggagatca 6720
tctgtgatgc gcagataccc agactcactg ccccgagact cagattccct gggtagggag 6780
gtcgggggat ctctgcttgt aatcagctcc ctagaggttc ccatgtagcc ggataagtat 6840
tgtcagaaca ctgaagattt ttgaaaaatg aaaaagagaa ggttggagat gtgtcttcag 6900
aagactacta agggtgctag gtagaggagg gaccagaggc agggagatga ggtaggaaac 6960
tgctattatt tgtcagggaa attgcaatca agaaatgagt tagaacaggg aaaacacaga 7020
ggcaggggag aggtggaagg gggaggaaag gagtagtgac aattccaggg tgtatgctca 7080
cccaaatcta gaagtaattg agcaaatgtt ttctgggcat tagagaaggc aactagaaca 7140
aacaggaatc cttgccttgg tgaaatgtat ttgaactggg tcagaaatga ggccattggg 7200
tatcaagcct taactccagc gccccctgga ggtcgctgat gtggctccag gctgacctgc 7260
tcctgtcaaa gaatattgag caagatgcct ctcatggaat gttctgggac cttaaaacag 7320
atacccaagt attccccctg atttcatggt tcccagaagc tctatgggga agaaattgta 7380
cgtaattcac aactgagatt tagacataag ttgaatagtg taatggacgt tgagttaacc 7440
gaggtaatga agtagtgaga cacaggtgcc cctgaaataa actcacattg agggaagagg 7500
ctgacaatgt ggatcagtct gtaaacaagg caaaaataca atagggagta agggttgtgt 7560
gtcagttcaa gactgtactt ttacctggcc cagcgccatg ttggggtatt tgtgttctcc 7620
aggaagtaga aaggaaagaa ctgagtgatt agggacctag aagactaatt tgagacattc 7680
ctcttgatga actgttctct agggtagtcc tctgaaagag ctgttctcta gtggatctcc 7740
ctgaatgaac tgttctctag gagcacttga cccttttctg tgtttgtttt ttgttttgtg 7800
tttgtgtttg tttttgagac aggttctcgc tctgtctccc aggctggagt gctgtggcgc 7860
catcatgact cactgcagcc tcaacctcct gggctcaagt gatcctcctg cctcagcctc 7920
ccatgtagct agaactacag atacatgtac caccatgtct ggctaattta tttttctttt 7980
tagagatggg ttctcactat gttgcccagg ctggtctcga aaccctgggc tcaagtgatc 8040
ctcacgcctc agcctcccaa agtgctaaga ttataggcat gaccaccatg cctggccttt 8100
tctgccttcc gagaaggaaa aaggtactgg tggcagagat ccaaaagaaa agttgccagt 8160
ggcagtgtgg aaattgacct gagaacaaca gaacaagctg gggcacaaat gcaaagatgc 8220
agagggaggc aacatctggt tatctgtgag accttcatgg gacctgaaga cacatccttt 8280
tggaaaagga tgggatttct actactcaag catgtagggg ctcaggatat tatgtaaata 8340
tgaagatttt gagtttttgt aagtgaggta aaaaaaatac ctaggttatt tacagaataa 8400
gacatgtcaa gctctcttca ttttctttgt attttcatga aataaaggta ttagattaac 8460
aggccaccat aatgccattg tctgtatatc ttaatttcaa gatattattt gagtaatttt 8520
tgcatccttt gtatcaagat agaactttga aaagacaggt aatttcacag ttgattaaat 8580
attctttgcc caaattactt ttggttaaaa tttctcctat atgtgctaca gagtgcaaac 8640
tctgtctccc tgccattccg ctatatactt actaattatt attttattca agatcatgca 8700
tgctctactt gaaggtctat cttttcagtg ctacccttac ccactagcct aatcacatta 8760
tatctatttt caacatctag gaatcaatta cgtagtgaac atgcctaaga aataataatc 8820
tgggcagatg cagtggctca ggcctgtaat cccagcactt tgagaggctg agcgggtgga 8880
tcacttgagg tcaggagttg gtcaagtgct cctagagaac cagcctgacc aacatggaga 8940
aaccttgtct ctactgataa tacaaaaatt agccaggtga ggtggcaggc acctataatc 9000
ccagctattc gggaggctga ggaaggagaa ttgcttgaac ccctgaggtg gaggttgcag 9060
tgagccaata ttgcgccact gcattccaga cttggcaaca gagcgacact ccacctcaac 9120
aaaaagaaag aaagagcgag attacgtctc aaaaaaggaa ggaaggaagg acaatctcaa 9180
atgctatttc attattttcc ttccccactc gtagtccagc ctaaggtgaa cgtttccccc 9240
tccaagaagg ggcccctgca gcaccacaac ctgcttgtct gccacgtgac agatttctac 9300
ccaggcagca ttcaagtccg atggttcctg aatggacagg aggaaacagc tggggtcgtg 9360
tccaccaacc tgatccgtaa tggagactgg accttccaga tcctggtgat gctggaaatg 9420
accccccagc agggagacgt ctacatctgc caagtggagc acaccagcct ggacagtcct 9480
gtcactgtgg agtggagtga gtctctgatg accgtctaga ccccacctct gaagagcagg 9540
ggactctctg gctctggggt ccactcatct tatcttctgt atctataccc tggggccatg 9600
tccaaacctc atctttcttc tataccagct cctgagcata gtttgaagcc agggcaatgg 9660
agacttcctg accttggctt aggggttcct gaagattcat agttctcccc cttgtcagag 9720
aatctaggga cactggctga tctcgaaacc ctcacacaca ggaactgacc tcacacatag 9780
gaacagttct cttctttcag cattttagcc tcttctcagg cattttgaga ggcaacttct 9840
agaatcagca tttgccacct tgttgaggtc acacccctgt tccggacatg agggtggctc 9900
tttctgaatt tcctcttagc aagctttttc ccctgcactg tcttcatccc gatattctgc 9960
atcacgctcc agaatctcag acaggacatg agtagggatg cagctggtgg aggtgacact 10020
aaacctgggt ctgtccttcc cagaggcaca gtctgattct gcccggagta agacattgac 10080
gggagctggg ggcttcatgc tggggctcat catctgtgga gtgggcatct tcatgcacag 10140
gaggagcaag aaaggtgaga aagcctgcaa ggtgagcggg acttaccttc ccctggcata 10200
ttcacactta ctccatgatg agggttcaga cagaaaagaa atgtcagaaa gctctagaga 10260
ccactgaaat cagatagtcg gggaacaaac atgacctatg gcgagagggg gatcccaggc 10320
tgggatctta attcagccag atgcatgagg tcccaggtgc tcagactcct gcggggcatc 10380
cattgagtgg tggtcaatgg aatttggtgg gatggaaatg tttctctaac tatctgaggt 10440
ggtttcaatg gctgaataca taacctttcc tctttcattt cagttcaacg aggatctgca 10500
taaacaggta atattcctgc tttgatttcc ttggggggtg ggttacagga ggatatgact 10560
cttttctgtg cattgtaata ctgaggctcc tccaggaagg gaatctcagg catgaacccc 10620
tctttcaacc tcagctctcg ggtgagtggg gaaaaagcat tgcacggctc cattgctgaa 10680
ggaagcagag atcagttctg ttctttatca gcctaagatg cagcctctca ccataatttt 10740
tctctcctgg acttaaagga aggaggccag caacctggga taacttgtcc tttaccccca 10800
cagggttcct gacctcaccg aaaagactaa tgtgccttag aacaagcatt tgctgtgttt 10860
tgttagcacc tggttccagg acagaccctc agcttcccaa gaggatactg ctgccaagaa 10920
gttgctctga agtcagtttc tatcgttctg ctctttgatt caaagcactg tttctctcac 10980
tgggcctcca accatgttcc cttcttctta gcaccacaaa taatcaaaac ccaacataag 11040
tgtttgtttt cctttaaaaa tatgcatcaa atcgtctctc attacttttc tctgagggtt 11100
ttagtaaaca gtaggagtta ataaagaagt tcattttggt ttacacgtag gaaagaagag 11160
aagcatgaaa gtggagatat gttaactatt gtataatgtg gcctgttata catgacactc 11220
ttctgaattg actgtatttc agtgagctgc ccccaaatca agtttagtgc cctcatccat 11280
ttatgtctca gaccgctatt cttaactatt caatggtgag cagactgcaa atctgcctga 11340
taggacccgt attcccacag cactaattca acatatatct tactgagagc atgttttatc 11400
attaccatta agaagttaaa tgaacatcag aatttaaaat cataaatata atctaataca 11460
ctttaa 11466
//