Dbfetch
ID OX175611; SV 1; linear; genomic DNA; STD; HUM; 11554 BP. XX AC OX175611; XX PR Project:PRJEB53990; XX DT 07-JUL-2022 (Rel. 144, Created) DT 14-APR-2023 (Rel. 144, Last updated, Version 3) XX DE Homo sapiens, MICA gene for MHC Class I chain-related gene, cell line DE DKMS-LSL_ID20117757_MICA_1, allele MICA*002:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (05-JUL-2022) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; f404f4588fc7001728fb0ea19742d09c. XX FH Key Location/Qualifiers FH FT source 1..11554 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID20117757_MICA_1" FT /db_xref="taxon:9606" FT exon 1..86 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=1 FT CDS join(17..86,6928..7182,7457..7744,8332..8610,8711..8857, FT 11409..11536) FT /codon_start=1 FT /transl_table=1 FT /gene="MICA" FT /allele="MICA*002:new" FT /product="MHC Class I chain-related gene" FT /function="antigen presenting molecule" FT /protein_id="CAH8699431.1" FT /translation="MGLGPVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSGDGSVQSGF FT LAEVHLDGQPFLRCDRQKCRAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK FT DQKEGLHSLQEIRVCEIHEDNSTRSSQHFYYDRELFLSQNLETEEWTMPQSSRAQTLAM FT NVRNFLKEDAMKTKTHYHAMHADCLQELRRYLKSGVVLRRTVPPMVNVTRSEASEGNIT FT VTCRASGFYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFT FT CYMEHSGNHSTHPVPSGKVLVLQSHWQTFHVSAVAAAAAAAAAIFVIIIFYVCCCKKKT FT SAAEGPELVSLQVLDQHPVGTSDHRDATQLGFQPLMSDLGSTGSTEGA" FT intron 87..6927 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=1 FT exon 6928..7182 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=2 FT intron 7183..7456 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=2 FT exon 7457..7744 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=3 FT intron 7745..8331 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=3 FT exon 8332..8610 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=4 FT intron 8611..8710 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=4 FT exon 8711..8857 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=5 FT intron 8858..11408 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=5 FT exon 11409..11554 FT /gene="MICA" FT /allele="MICA*002:new" FT /number=6 XX SQ Sequence 11554 BP; 2372 A; 2962 C; 2781 G; 3439 T; 0 other; tggcgacgtc ggggccatgg ggctgggccc ggtcttcctg cttctggctg gcatcttccc 60 ttttgcacct ccgggagctg ctgctggtga gtggcgttcc tggcggtcct cggcggagcg 120 ggagcagtgg gacgtttccg ggggtcgggt gggtagcggc gagcgctgtg cggtcagggc 180 gggcctcctg tgcgctgtcg gtggcgcagg gagctggacg cggcccgtta ccgccacact 240 tcagccctgc ttccccgtca cttttcagtc ctcctcggga tcgcgcatca cctgcacttt 300 ctggtctcct cctgctcttt ctctcctcgc gtctcctccg cttcctctca cttttcggac 360 aaaccagtcc ttctgaggcc catgggttcc cgggctgcct ccggggctgc tcctgtgaat 420 ggcattcgag tgcccttcca gcgcggccac tgaagcagcc acaacccccg gtgctcgggg 480 cggctctcag gtccctgaag tcctgtcctc tcccggagcc gacgtgttct cagctcctgg 540 gccgcagctc ctggagtagg ggccctcctt tctcgggacc cggagctggt gcttcctgct 600 gctgtgggga ctgtgggggg tcctgactct caagctgagg ggttggagtc tgcaggctcc 660 gggcagagga ttcttcctgc gacttctctc atccccagct cattctcccc tcgcctctgg 720 ctccgagggt cctctcctct ctctcatccc acccctacta atgaccagtg atctaaggac 780 accagattcc ctctcacctc ctccctgccc atctcagggc ccgctgagtc cttttgccct 840 cccagctccc tgctacccct tcctgtgtgc tgttctctga tccatttcta gggtgtcctc 900 tgccctcatc ccctgtcccc gccaccgaag gtccctcctg caccccttat gggcctttcc 960 tacaagcagc cttcacccag tgctgcccct atgcctcccc gttcccaaat gtccctgact 1020 ctaactttct ggtgctgcct tttatccggg ggggtcttcc ctccatccca ctcccctcca 1080 cacccccaag gggaaccctg atgctaatgg cagttgggcc ttaggcaggg cgcagggcag 1140 cgcagatgcc ccctcccctc cagtgcagat gcctgctctg gaccctgcct cattgtggcc 1200 ccttccccac tccttcatcc tcagcctcac cctcttgagg accccaccct ccagcccaca 1260 ggtgctggac catccctccc tggtccctcc gcccctctcc accttgggac cttgtgctgc 1320 tcctatctct tgcccagctg ccttgggccc tcagcacgtt ctcatctttc agtgggaaag 1380 tgggagtgct ggagcatatg acagtgctga gcatctttcc caagccccac cctcccccag 1440 agcaccctcc cctcctgtcc tcaccctacc ccaagttctc ccacagtcac tcctgcccca 1500 tgctcatgcc gccctccagt tcttgctctg cccatctccc ctccccaacc cagacctaaa 1560 acaggctgtt gggccaactg ttccttgacc ttccttcttt tcttttggtt ccttgacccc 1620 agtgggctct cactccccac accgcatatc taaaatctgt tttgcctgct cttggggtgc 1680 cactgctccc cctccagcat tactcctttt ggcaggtcct tcctcaggct gagaatctcc 1740 ccctctacct tggttttctc tctctggcca gcacccccac cccttgcttt gtttttaatt 1800 tttaactttt gtttgggtac gtagtagata tatatgtata tatttatggg gtacatggga 1860 tattttcaca caggcctaca atatgtaata atcacatcag ggtaaatggg ttatatcaca 1920 acaagcattt atcctttctt tgtgctacaa acaatcccat tatgctcttt cagttatttt 1980 taaatgtaca ataaattatt gttgactgta ctcaccctgc tgtgctatct actagatctt 2040 attcattcta attatatttt tgtacccatt attaaccatc cctgctcccc cactccccac 2100 tacccttctc agcctctggt aatcatcatt ctattgtctc tccccatgag gtccattgtt 2160 ttaaattttg gctgccacaa ataagtgaga acatgcaaag tttgtctgtc tgggcctggg 2220 gcttatttca cttcacagga tgacctccag ttctttgcaa atgacacgat ggctgaatag 2280 ttctccacat acacatgtac accacatttt ctttatccat gcgtctgttg atggacactt 2340 agattgcttg cagatcttgg ctactttgaa tagtgctgca ataaacatgg aaaagtagat 2400 agctctttaa tataccgatt tcctttcttt ggagtatatg cctaacagtg ggagtgctgg 2460 agcatatgac agctctattg tatttttagt ttttggaaga acctccacat tgtttcccat 2520 agtggttgta ctagtttacg ttcccaccaa cagtgtacat cctcaccagc attccttatt 2580 tctacatcct cgccagcatt ccttattgcc tgtcttctgg ataaaagcca gtttatctgg 2640 ggtgggatgt tatctcgtag gagttttgat ttgccttcat ctgttgacga atgatgttga 2700 gcaccttttc atatacctgt ttgccattta tatgtcttct tttgagaaat gactattcag 2760 atcttttctc atttttaaat tggattatta tatttttttt tcctatagtt gttcgagctc 2820 cttatatgtt tcagttactg atcctttgtc agatgaatag tttgaaaata ttttctccca 2880 ttcttggatg gtctcttcat tttgtttatt gtttcctttg ctgtgcagaa gcctttttac 2940 ttgatatgat cccatttatg caattttact ttggttacct gtgcttgtgg ggtattactt 3000 taaaaatctt tgcccagtcc aatatcctag agagtttccc caatgttttc ttgtatagtt 3060 tcatagtttg aggtcataga tttacatctt taatccactt tgatttgatt tttgtatatg 3120 gtgaaagaca gggtctagtt tcattcttct gcataaggat atctagtttc cccagcacca 3180 tttttgaaga gactctcctt tgccaatgtg tgttcttggt acctttgttg gaaatgagtt 3240 tactgtagat gtatggaatt gtttctgggt tctctattct gtttcattgg tctgtgtgtc 3300 tgtttttatg ccagtatcat gctgttttgg ttactgtagc tctgtagtat aatttgaagt 3360 cagataatgt gattcctcta gttttgttca ttttgctcag gatagcttta tctattctgg 3420 tttttttgtg gttccatatg cattttagga ttatttttat tatttctgtg aagaatgtca 3480 ttagtgtttt gatagggatt gcattgaatc tgtagattac tttgggtagt atggatattt 3540 caacaaaact gattcttcca atccatgaac gtggactatc ttttccattt tttgtgtcct 3600 tcaatttttt gcatcagtgt tttttgtttt tggtttttga gatggagttt cactcttgtt 3660 gcccaggcta gaatgcaagg gtgtgatctt ggctcaccgc aacctccgcc tcccaggttc 3720 aagcgattct tctgcctcag cctcccaagt agctgggatt acaggcatgt gccactgtgc 3780 ctggctaatt ttctattttt attagagatg gggtttctct atgttggcca ggctagtctt 3840 gaactcctga cctcaggtga tccacctgcc tcggcctccc aaagtgctgg gattacaggc 3900 atgagccacc acgcccagcc acatcactgt tttatagttt ttattggaga ggtctttcac 3960 ttcttcagtt aggtttattc ctcagtattt tattttattt gtagctattg taaatgggat 4020 tcgtttcttg atttcttttt cagattattt gctgttagca ctgatttttg catgttgatt 4080 ttgtatcctg caactttact gaatttgttc ttcagttcta atggtttttt ggtggagtct 4140 ttaggttttt ccaaatatca gaccacatga tctgcaaaca aggataattt gacttcttct 4200 tttccagttt taatgccctt tctttctttc tcctgtctga ttgctctagt taggatctgc 4260 agtactgtgt tgcataactg tggtaaaatt agtcatcctt gtcttattcc agatcttaga 4320 gaaaaggctt tcagttttcc cccattcagt atgttactag ctgtgagttt gtcatatatg 4380 gcttttatta tattgaggtc tgttccttgt atacttagtt ttttgagagt ttttatcatg 4440 aagggatgtt gaatttatca aatgcttttt cagtatcaat tgaatgatac tggcttttgt 4500 cctttattct gttgatatga cgtattacat tgattgattt gtgtatgtta aatcatcctt 4560 gcatacctgg aatacattcc acttgctcat aaagaatgat cttttttaat gtattgttga 4620 atgtggtttg ctagtatttc cttgacgatt tttgcatcgg tgttcatcag ggatataggc 4680 ctgtagtttt cttttttatg atgtgtcttt gcctggtttt tgtatcagga tattcctggc 4740 tttgtaaaat gagtttggaa gtattccctc ctcctctatt tttcagaaca gtttgaatag 4800 gactgacata tgttgttctt taaaagttta attgtggtaa attatacatt acataaattt 4860 tactgtttta accactttta agtgtatact cggtggcatt agatacattc acatttttgt 4920 gcaacccaaa actctgtgcc cattaatcgg taactcccca ttcctcccta cctctggccc 4980 ctggtaacca ccattctact ttttgtttct atgaatttga ccactctagg tacctcattt 5040 aagcagaatc atgtaatgtt tgtctttttg tttctggctt atttcactta taatattttt 5100 gaggttcggt gggcacagtg gctcacgcct ggatttccag cactttggga ggctgaagca 5160 ggtggatcac ctgagtttcg gagttcgaaa ccagcctggc caacatggtg aaaccccatc 5220 tctactaaaa ataataaaag ttagccgggc gtgatggcgg gtgcctgtaa tcccaactac 5280 ttgggaggct gaggcaggag aatcgcttga atccgggaag tggaggttgc agtgagctga 5340 gatcaggcca ctgcactcca gcctgggcaa caagagtgaa attccatctc caaaaaaaaa 5400 aataaaacaa taataataat aatatttttg aggttcatcc aagttgtagt atgggtcaga 5460 atttcattcc ttttaaggat ggataatact cattatatgt atgtaccaca tcttggttat 5520 ccatccctca gacaacggac acttgggtta cttctacctt ttggatattg gcaaatattt 5580 catttccttt gggtatatat ttatttcctt tgggtatttc ttttgggtat atatccagaa 5640 atagaagcag tacatagggg cttcattttc tctgtctctt tgccaacctt gctctgtgtg 5700 tgtgtgtgta tgtgtgtgtg taggtgtgtg ataacagcca tcctgattgg tttcaggtgg 5760 catctcattg tggtttggat ttgcattttc ctaatgagtg ctgatattga gcatcttttc 5820 atgtgtttgt tgatcatttg taattttctt tgaagaattg gccatttaag tcttttgccc 5880 attttttccc ccacatagct tctcttatca gatatatgac ttgcaatatt tatttcattt 5940 cggggttgat tgctttttca ctctgattgt gccctttgat gcatagatgt tttgaatttt 6000 catcagtcta ctttgtcagt tctttctatt ctatctgtgc tttggtgtca tatccatgaa 6060 agcactgtca aatcctatgt catgaacatt atccccaatg tttgcttcta agaaattttt 6120 aggttttagt tcttgagtgt agagtttagg tctttgattc attttgagtt aatttttgta 6180 tatagtgcaa attaagggtc caattttatt ttaacacccc ctgcccccag aactatttgc 6240 tgaaaagatc aactgactct ttgtcacctg ctcaccccag tggacactag ctgttccatc 6300 caattgctgt cctggggcct tgtcatgcca ctcttccact ttgaacccaa gcccacaccg 6360 ttgctcccct ctgggatact gaccccacta taaacttcac tggggctaca accttcctac 6420 cctttgtgcc tcatgaccac cccctccctt gtccccacca tgcccatgat gagtctcttc 6480 tcgaggcagc tccccttgcc tccatctcac cctcacctat gcaccacagc cacactggac 6540 atgggtccct ctgagcctga gtcccttccc attcccacca tcccctctgg caagaccttc 6600 cttccaccac cttcatgctc ctcccttgcc cctgcagggc agcctctccc cttggcccct 6660 attcccttag ggggcttgtg gccacccagt ccttgcacct ggcctacaag tttgccatct 6720 tcattccccc ttcttctgtt catcagcccc ctcctctatc ctcccaccct cacagttttc 6780 tttgtatatg aaatcctcgt tcttgtccct ttgcccgtgt gcatttcctg cctcctcagg 6840 aaggttggga cagcagacct gtgtgttaaa catcaatgtg aagttacttc caggaagaag 6900 tttcacctgt gatttcctct tccccagagc cccacagtct tcgttataac ctcacggtgc 6960 tgtccgggga tggatctgtg cagtcagggt ttctcgctga ggtacatctg gatggtcagc 7020 ccttcctgcg ctgtgacagg cagaaatgca gggcaaagcc ccagggacag tgggcagaag 7080 atgtcctggg aaataagaca tgggacagag agaccaggga cttgacaggg aacggaaagg 7140 acctcaggat gaccctggct catatcaagg accagaaaga aggtgagagt cggcaggggc 7200 aagagtgact ggagaggcct tttccagaaa agttaggggc agagagcagg gacctgtatc 7260 tacccactgg atctggctca ggctgggggt gaggaatggg ggtcagtgga actcagcagg 7320 gaggtgagcc ggcactcagc ccacacaggg aggcatggag gagggccagg gaggcgtacc 7380 ccctgggctg agttcctcac ttgggtggaa aggtgatggg ttcgggaatg gagaagtcac 7440 tgctgggtgg gggcaggctt gcattccctc caggagatta gggtctgtga gatccatgaa 7500 gacaacagca ccaggagctc ccagcatttc tactacgata gggagctctt cctctcccaa 7560 aacctggaga ctgaggaatg gacaatgccc cagtcctcca gagctcagac cttggccatg 7620 aacgtcagga atttcttgaa ggaagatgcc atgaagacca agacacacta tcacgctatg 7680 catgcagact gcctgcagga actacggcga tatctaaaat ccggcgtagt cctgaggaga 7740 acaggtaccg acgctggcca ggggctctcc tctccttcca attctgctag agttgcctca 7800 cctcccagat gtgtccaggg aaaccctccc tgtgctatgg atgaaggcat ttcctgttgg 7860 cacatcgtgt cctgattttc ctctattgtt agagccactg gataaagaca gtgggtcagg 7920 gactggacca tccagtgttg taatcagggc aagtagagga ccctccgaca gaatcctgag 7980 cctggggtgg gtgtcaggca ggagaggaag gcttcagggc cagggctgcc ccctctgcct 8040 cccagcctgc ccatcctgga gagttccctc ctggccccac aacccaggag tccacccctg 8100 acatccccct cctcagcatc aatgtgggga tcccagagcc tgaggccaca gtcccatggc 8160 ccatcctcct gccagcctgg aagaactggg ccccagagtg aggacagact tgcaggtcag 8220 gggtcccaga gggcttcagc cagagtgaga acagtgaaga gaaacagccc tgttcctctc 8280 ccctccttag aggggagcag ggcttcactg gctctgccct ttcttctcca gtgcccccca 8340 tggtgaatgt cacccgcagc gaggcctcag agggcaacat taccgtgaca tgcagggctt 8400 ctggcttcta tccctggaat atcacactga gctggcgtca ggatggggta tctttgagcc 8460 acgacaccca gcagtggggg gatgtcctgc ctgatgggaa tggaacctac cagacctggg 8520 tggccaccag gatttgccaa ggagaggagc agaggttcac ctgctacatg gaacacagcg 8580 ggaatcacag cactcaccct gtgccctctg gtgagcctag ggtgaccctg gagagggtca 8640 ggccagggta gggacagcag ggatggctgt ggctctctgc ccagtgtata acaagtccct 8700 tttttttcag ggaaagtgct ggtgcttcag agtcattggc agacattcca tgtttctgct 8760 gttgctgctg ctgctgctgc tgctgctgct atttttgtta ttattatttt ctacgtctgt 8820 tgttgtaaga agaaaacatc agctgcagag ggtccaggtg agaaaagcgg gcagtttctg 8880 gagatggtaa ggcccctgtc tgggcagtag ggtcccctca ttgctcctgc aaagataggc 8940 atgttggtga caaggcttct gtaacagggg atgaaagttg gggaatttgg gaagggaatg 9000 ggggcaacat ctccatctac acccataagt gctgcccaag cgagggtcaa acgcccagct 9060 gtggcatctt cctgctgcag gtgaggagtg ggcagcaggg agggctgcgg cgcctgctct 9120 gtccccatcc cggtctctgt gtctcttgga ctcactaggg cgcatccagg tggggtgagc 9180 tgggaatcac gtgctgaatg ctgaggacct ggatgatcac ggcctcagag ggagcaaata 9240 gtaaaggcag ctgtgatctg gggagggcca gaaactggag aggaatctga ggagaggcgg 9300 tgcccctatt cccttcctct ctgcatccct ctcccctatt tctccagcca ttggggcgga 9360 caccaagaaa aagacctatg aggcccagcc tgggggccct gcctgtgtag ccctttggag 9420 accccttgta acagggaggg tcctgagcac acatggccat ctctgtccac ttttcagctc 9480 cccatgcacc tcctccagga gctttcttgg ggttgtcgtg tcctctgcac cattcgaggc 9540 cctactcttt ccaggttccc acagcctggt ctccctgagt ttcttgcaga tgagatggat 9600 gagtagataa gcagatgtcc ctgggccatt tgaggagtgg ggcccagccc ctcatcaggg 9660 cagctgtggt ccctgttttc atcctacctc cgagtgtttt cttctccagt ccctgaggga 9720 cacagtcctc agggcccatg tttttggggc tttaatctgt gctctgtggc ctcaccttgc 9780 cctccctgag ccaatttccc tttctaaagg tggtcactgc ctggtaagtt tggagtaagg 9840 gacggtcaga atcatttccc ctacagtcag gttgtttgat gggggatgaa aagagacagc 9900 aggaagtttt gtgtttctgc aaagacagaa gcagttcagg ggacagtaag aggctggggt 9960 gtccaggagg gtgtgtctgg cagtagggtc gctggtttct catccttgaa cctaattgca 10020 ctgtcagtcg gcccctcagg cctgagcaga tgggaaggtt tgtcccctgc cctgcagtaa 10080 gagggccctg tccaggaggc acccataaca ggggcagtgc aggtctgtgg tcgctcctgc 10140 tctcacctgt ggcgtctccc gtagagggat tatcagttct ggttccctgt gggcaggaat 10200 ggtttcctca taggtcactg gagttttggc caggaaaaga gtatgaagtt catgtgccag 10260 tttctcaaaa ttcctgcttt caatgttgat gtcaagcaaa gatattcgta atttcagctc 10320 tataatctta ataggatttc ccctaatatt gtaaagcatc ttatatgaaa caggaacaca 10380 aatttctcaa aattcctgcg atgtccaata aagattttca taatttcggc tctccaatct 10440 taataggatt tcctaatact gtaaagcata ttaaatgaaa caggaaccca aatttggagc 10500 cccctctcca ggaggttctg tgtggagatg gtggctgtgg cagtggcagt tcccaggtgc 10560 agagggtggg cagaggcagc ctcaggctaa ggggtctccc ctactccaca tggagaaaat 10620 cccttgtagg ttgcaagggc agtggccggg tggaatccct gctagggaca gagcaggaag 10680 gcctcgcagc ctcaccaagc agcagccctg gggtggagct gcgtttccag ggttaagcgg 10740 accaggcagg agcagtggtt actcaacagc aggtcacagg cttgggttgt gagggtcagg 10800 agaggccagg cctcctcgag caaggtgggg gtcccagggt caggtcaggt gcagatcctg 10860 tggcagccac gtctttccat gctgggcctg ctgggccccc caggctttct gatggggtcc 10920 ccagttagga gctgcctgct cagggctggg aggggaggag cgctgagctg cagatagagg 10980 gcagagccca cagtgggcag ggcctgccct ggtgtgtagg tgcctctgca ggagaggagg 11040 gcctggggac tgagagcaag ggtcagggcc tctctttgag gaggcctctc actgtaacag 11100 gactggtcag gcctgagagg aggtcactgg gttccctctt gggtcttgtc ctttagtctt 11160 ggggcccttt ccctccctgc acgatgagtg gtgggcacag ggcaggggct gatgttgatg 11220 gagtgatggg agggaactgg taggggctgg gaaaagcaag gagggaggaa gaaaaaagtg 11280 ggggcctcat cttctctcag agaaagggcg aatctggttt tggagcaact gaagagagaa 11340 aagtccccag ggaataaaca caacactgca cccagtggag catttacccg tttccctctt 11400 ttctccagag ctcgtgagcc tgcaggtcct ggatcaacac ccagttggga cgagtgacca 11460 cagggatgcc acacagctcg gatttcagcc tctgatgtca gatcttgggt ccactggctc 11520 cactgagggc gcctagactc tacagccagg cagc 11554 //