Dbfetch
ID OX111304; SV 1; linear; genomic DNA; STD; HUM; 8682 BP. XX AC OX111304; XX PR Project:PRJEB53805; XX DT 07-JUL-2022 (Rel. 144, Created) DT 05-AUG-2022 (Rel. 144, Last updated, Version 2) XX DE Homo sapiens HLA-DRA gene for MHC class II antigen, allele DE HLA-DRA*01:01:01:NEW XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Turner R T.; RT ; RL Submitted (23-JUN-2022) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, The Royal Free Hospital, Pond Street, RL London, NW3 2QU, United Kingdom XX DR MD5; 862dfd5c9b5c14de8c7f38a0c9bfae49. XX FH Key Location/Qualifiers FH FT source 1..8682 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300213" FT /db_xref="taxon:9606" FT CDS join(1450..1531,3946..4191,4683..4964,5254..5408) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:01:01:NEW" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH8161910.1" FT /translation="MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSG FT EFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY FT TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFL FT PREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCAL FT GLTVGLVGIIIGTIFIIKGVRKSNAAERRGPL" FT exon 1450..1531 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:01:01:NEW" FT /number=1 FT intron 1532..3945 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:01:01:NEW" FT /number=1 FT exon 3946..4191 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:01:01:NEW" FT /number=2 FT intron 4192..4682 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:01:01:NEW" FT /number=2 FT exon 4683..4964 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:01:01:NEW" FT /number=3 FT intron 4965..5253 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:01:01:NEW" FT /number=3 FT exon 5254..5408 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:01:01:NEW" FT /number=4 XX SQ Sequence 8682 BP; 2532 A; 1809 C; 1849 G; 2492 T; 0 other; ctccctcact gccaggtcac tcttcatgga agtatttgta ttccagtcct ttctgtggaa 60 agaaattaac attctccttt tcataacact gtatcttcag aaacaagaga gtcgaagtct 120 cctaattttc aggactgtct atgttgaaca tcaaaatata ttctttagag cagatcttta 180 ataatcatat gacaagagaa aaactttcat aatcttatga catgagggaa ggaatattaa 240 agccgttctg tgggttatta tctctaacgt tcccaataga ataggctttg ccagctgggt 300 gcggtggctc atgcctgtaa tcccagcact ttgcgaggcc aaggcgggca aatcacgagg 360 tcaggagtct gagaccagcc tgaccaacat ggtgaaaccc cgtctctact aaaaatacaa 420 aaattagccg ggcatggtgg tgggcgcctg taatcccagc tactcaggag gctgaggcag 480 gagaatcgct tgaacccggg aggcggagat tacaatgagc tgagatcacg ccaccaactc 540 cagcttgggc gacagagcaa gactctgtct aaaaaaaaaa aaaaaaaaaa aagaataggc 600 tttgcccact atactctctc atattcattg acctgaatcc tcaaatgagg tgtgtccatt 660 agtcaactcc aatctcttgt catatataag atggtagaga tgagaagaag gtagctcctt 720 tacagcccac tatttccact aactactacc tgtgtttcaa gatacagcct ttcatccttc 780 tccagtgttg agagtgttga acctcagagt ttctcctctc attttctcta aatgagatac 840 aatgccagcc atcccaagct cttggcctga gttgatcatc ttgaagtcta ggactccaag 900 aagcatgaaa gagcttcttt agtgaagcta tgtcctcagt actgccaaaa ttcagacaat 960 ctccatggcc tgacaattta ccttctattt gggtaattta ttgtccctta cgcaaactct 1020 ccaactgtca ttgcacagac atatgatctg tatttagctc tcactttagg tgtttccatt 1080 gattctattc tcactaatgt gcttcaggta tatccctgtc tagaagtcag attggggtta 1140 aagagtctgt ccgtgattga ctaacagtct taaatacttg atttgttgtt gttgttgtcc 1200 tgtttgttta agaactttac ttctttatcc aatgaacgga gtatcttgtg tcctggaccc 1260 tttgcaagaa cccttcccct agcaacagat gcgtcatctc aaaatatttt tctgattggc 1320 caaagagtaa ttgatttgca ttttaatggt cagactctat tacaccccac attctctttt 1380 cttttattct tgtctgttct gcctcactcc cgagctctac tgactcccaa cagagcgccc 1440 aagaagaaaa tggccataag tggagtccct gtgctaggat ttttcatcat agctgtgctg 1500 atgagcgctc aggaatcatg ggctatcaaa ggtaggtgct gagggaatga aatctgggac 1560 gatagactac gaagcattgg agaaaagacc tatggacatt tggaagataa tgtgtggagt 1620 gaaagaatag tgtgacaggt attatgtggt ctcgacagaa agtataacaa attgtggttt 1680 ggtggagttc ttccctcacc acaaactgaa gtaagtcaaa tttggtttag agggtcaaaa 1740 ctgagttgtg tattgatgaa tagcacggtc ctgctacaag ccaaactggg ggtgggggtg 1800 ggggtggggg aggaagaata ttttctggca agcattaaca agttatattt ctgggcttta 1860 attattcttt ctggaaaatt agtaaaatta aaaactaaaa accacacata gttttgctag 1920 aattaaatga aaaaaaaaag ttattagccc tgttcttatc tgaatacatg atacagtagt 1980 tattttttgg agtgtaaatc ctgtcggtat atattgagca catatattgt gttgaagatt 2040 actagaagga aaagtcatca aaaagcaaca atttacccca ggaaaagggg agggaaggca 2100 tgctgatatg agttgcctca tgggacagtg atagccattc cctgccttcc catctccatg 2160 gtacagcaga tcttatatca tgttaactta gtaatatttc caagagagta gaaaaataag 2220 taaggaaatg gggaatctga tattattctc tctcatctcc agagcaacat tggtgctgtt 2280 gtaaagatgt actgtagaaa agtattcttc acccagcgtg acccccacag aaggtgtcag 2340 gtagacttga aataagcaaa gtaataaccc agctcccata cccatagtgg caattgtaga 2400 tttctattgc cccaaaagag ccatacatag ggatacttac ctagaaagac agaggatctt 2460 cccttggttt gtgaagaggc agctagtata tttgtgtgtg tttgcataga tgcaaacggt 2520 aaataaattc ctaggtttat caatacacag tcaaacatta aaatctctca tcttggctgg 2580 gcacggtggc tcacgcctgt aatcccagca ctttgggagg ccgaggcggg cggatcacga 2640 ggtcaagaga tcgagaccgt cctgggcaac atggtgaaac cccgtctcta ctaaaaatac 2700 aaaaaattag ctgggtatgg tggcacacgc ctgtagtccc agctactcgg gaggctgagg 2760 caggaggatt gcttgagccc gggaggcgga ggttgcagtg agctgagatg gtgccactgc 2820 actccagcct ggcgatagag caagactccg tctcaaacaa ccaaaccaaa acaaaacaaa 2880 atatctcacc ttatctttga agactaagga aaaaaaaaat ctcccactca tcgatacact 2940 ccacagaggc agcatactct cccagtgtag ctttctcttt tcatgttcat tattcccttg 3000 gtgttggtta ttctcaatgt caatcgtaac agaacatctt ccataataac agtcccaatt 3060 taaggagcat taagataaaa ggtggaattg ccaaggtcaa tccagacgag aaccttctca 3120 tagaggtaac caccgtgtgg gtttggatgc tgggaagcag ggggactatg acgctacaag 3180 gtctcagtct taatttttgg agtacttcag tccccaggta tattttccat agatttggcc 3240 cttaaataaa aagaagcttc tgactctaaa atgtaaacag tgcttgttac agtcttgttg 3300 atatattaag aaattactca ccttatctca tttaatctta aaaacaaacc cctgacagga 3360 tcaaaaccac agcagggcta cataatagga aaactataca taaataggta gaataatctg 3420 ctcaggatca ctaggtaagt tgctgaataa gaattcaaga tgtttttgat cccagagttt 3480 aaaacccaac ctttcaaaca gtgtttcctt cttcttagag tacaatgttc tgagaaagag 3540 atcctctgga attctggcct aagtgtattt aatgcccggg taaagaaagt gagagaacat 3600 ttctctttag gggctgctgc tggatttcta aaaagaaaat aatttctcag ctagtaacat 3660 ggagccaaac aacagcttca caagactctg ggttctttag ccctcatctc cttcaaccca 3720 ccctctttat aaccagtcct tcttgttttt ccccttccag ctttgttcag cagcatgccc 3780 ttcacccaga ccttgtcttg tcactcaccc ctactcgcca tcattctttc attcctcttg 3840 gcccaatctc tctccaccac ttcctgccta catgtatgta ggttattcat ttccctctct 3900 tgattccccc cacccaactc tctttctcca tttcttgcct ttcagaagaa catgtgatca 3960 tccaggccga gttctatctg aatcctgacc aatcaggcga gtttatgttt gactttgatg 4020 gtgatgagat tttccatgtg gatatggcaa agaaggagac ggtctggcgg cttgaagaat 4080 ttggacgatt tgccagcttt gaggctcaag gtgcattggc caacatagct gtggacaaag 4140 ccaacctgga aatcatgaca aagcgctcca actatactcc gatcaccaat ggtacctccc 4200 tctctgctgc actcctggac atgggaatcc atagtttgaa agtagttgct tcagctcttt 4260 gtgttagatt attgtaactg attttccctc caagggccta accttgccat taacaagccc 4320 caaattctca tgccagaggt ctgagaactt tatgggtttg atcctatctt gttgtgctca 4380 agtcttgtct ctgtcatcca tggtctccta cgaagtcatt gccctaagtt catgctaggg 4440 gagccagaag ggaagtcctt ggatatctta tacctcaata ttggctcaat ttcttgggga 4500 gggggtgctg tcagagattg ttatctgagg atgtgacata gatttctcag ggcacaattt 4560 caactacttt ttcagcttta gggtttttag atacgtttgt accacaattg agcatgggag 4620 ggagaggggt gagcctaagc agtgatggct gatttctgtc acgtctgtca tgtgtccccc 4680 agtacctcca gaggtaactg tgctcacgaa cagccctgtg gaactgagag agcccaacgt 4740 cctcatctgt ttcatcgaca agttcacccc accagtggtc aatgtcacgt ggcttcgaaa 4800 tggaaaacct gtcaccacag gagtgtcaga gacagtcttc ctgcccaggg aagaccacct 4860 tttccgcaag ttccactatc tccccttcct gccctcaact gaggacgttt acgactgcag 4920 ggtggagcac tggggcttgg atgagcctct tctcaagcac tggggtatgg accaacactc 4980 aatctccttt atttcaaggt ttcctcctat gatgcttgtg tgaaactcgg tgttctaact 5040 gtttcataat atctgctaca attaatataa ctgtcttctc ctactatcca gcttcctcct 5100 ttttttaatc tgtaattctc tcaatacatc attctgtctt cctcttcttt aatctatgaa 5160 taacttttct ctttattaag aaccctacat ttgattctga gtgttacttc ttcccacact 5220 cattaccatg tactctgcct tatctccccc cagagtttga tgctccaagc cctctcccag 5280 agactacaga gaacgtggtg tgtgccctgg gcctgactgt gggtctggtg ggcatcatta 5340 ttgggaccat cttcatcatc aagggagtgc gcaaaagcaa tgcagcagaa cgcagggggc 5400 ctctgtaagg cacatggagg tgagttaggt gtggtcagag gaagacatat atggagatat 5460 ctgagggagg aaaacagggt ggggaaagga aatgtaatgc atttaagaga caaggtagga 5520 acagatgtgg ctcttgattt ctctttgcta gaatgaatca gacattggta tcatctggta 5580 tcccaaagct tcagggtctg tcatcccttt ctatagacgg gcaccttgat cacggctcca 5640 gtcttagaaa tcatctccag tacctaaaac cattgtttca cattagaata ctgagtctag 5700 ggatctagaa aatacattag aatatggagt ctagggatct agaaaatact gagtctaggg 5760 atctagaaaa ataagcctca agatttgggc acatcctagc ttgtatttcc tggggcaggt 5820 catcagttca gaagcatttc cagatcctgg ctcctttcag gttagggtca attcattgca 5880 tgaaatggga atctcttaga ggccaatgcc tgcttttgct tctttagtct caaatgtagt 5940 atgagaaact ctaaaaaaag gtaaagcatg gttgcttatt atgttcagtt ggagagtagg 6000 aactaactgt atacagttag ttcatgttgg aaaggttaga tgaacattga aagaattttg 6060 caaagtcaaa ggattaagag agaagaggaa ggaatctgaa gcaaggagct caaaacggat 6120 cttaaattcc ttggtaacta tgtgtgtctt gctataggtg atggtgtttc ttagagagaa 6180 gatcactgaa gaaacttctg ctttaatgac tttacaaagc tggcaatatt acaatccttg 6240 acctcagtga aagcagtcat cttcagcgtt ttccagccct atagccaccc caagtgtggt 6300 tatgcctcct cgattgctcc gtactctaac atctagctgg cttccctgtc tattgccttt 6360 tcctgtatct attttcctct atttcctatc attttattat caccatgcaa tgcctctgga 6420 ataaaacata caggagtctg tctctgctat ggaatgcccc atggggcatc tcttgtgtac 6480 ttattgttta aggtttcctc aaactgtgat ttttctgaac acaataaact attttgatga 6540 tcttgggtgg aatttttggt gtttaagcca gttctttggg tggcggtggg gggtggggag 6600 tcggtcctgg ggaatatatg tgatcctttc ccggtaaaat atctgaatgt tgaatttatc 6660 ttataaattc tagaattcat cagacatatc ccggttcatt tgggcttggt ctcattttgt 6720 gcatctgcag gcaaccctct tgttgtggtc tagtcctcat caggaaaacc taaagtgggg 6780 ttggtttgtt gggagatctc tactgagcaa tgatataact ctgtcttcag tagagtgaat 6840 ctgaaacccc aaggtatgga tctcagaatg catgggatag aggggagcag atggggttag 6900 agtggggaga aggaagacag aagaatccat aaacattgca ggatttacat atcaacatcg 6960 ttcattccag atttaatgag caaagaggtt ggacactgaa gactggcctt acccattctg 7020 ttagacatag tctcagatgc ctattttatt accgagagag tagtctgact gattcttgaa 7080 accaccttat atttgaagat gtgtctttga gtggaaaagc tgagtgaaat ttggggttgg 7140 ggagaaagat atgacattaa gatgagagga aggaatattt gaaacacaat gaactgttgc 7200 tcatttgtct ataaaactat gacttgatat ttatctctaa aatagtttct agaacctgcc 7260 ataaaccact aagataaact attcatgata gtgtggtaga ctgcaaataa atgctgttga 7320 aatgagttag gcttgggttt catcttggct gtatcattta ctagctatgt tttcactggt 7380 atcttactta acttagcctc acattactca tgaaaatact ggtgttaatt tttactacat 7440 tgaattaata tcagaattaa aaggaaaacg caagcaaagt aattagatac atgcttagtg 7500 ataataaaat attgcaaaaa attatacatt ctgttgtttt tctcaaaatt tctatagact 7560 gatgataaaa atctaagaga agctaaacaa aacaaggata aaccaaagca tcatgacatt 7620 ctaagcctta ctaataaata agaagtttct cggctgggca cggtggctca cgcctgtaat 7680 ccagcacttt gggaggccga ggtgggcgga tcacaaggtc aggaaatcaa gaccatcctg 7740 gccaacatgg tgaaacccca tctctactaa aaatacaaaa attagccagg cgtggtgata 7800 ggcgcctgta atcccagcta ctctggaggt tgaggcagga gaatctcttg aatccgggag 7860 gcagaggttg cagtgagccg agatcgcacc actgcgctcc tgcctggcaa cagactgaga 7920 ctccgtctca aaaaaaaaaa aaaaaaaaaa agtttctcta ctgttggttc agagaatcaa 7980 agcagaatct tgagactact gatggtagaa taggtatgaa tgtctttctt acatgactac 8040 aaactttatt ataaaataaa tagcttaaca cagagaatac actaaaactt agacaagcat 8100 ggattaagaa agcaaaaagt aaacccatat actaccatgt aagaaaaccg tttttggcca 8160 ggcgcggtgg ctcacgcctg taatcccagc actttgggag gccgaggcgg gcggatcacg 8220 aggtcaggag atcgagacca tcctggctaa catggtgaaa ccccgtctct attaaaaaaa 8280 aaaaaacaaa aaattagccg ggtgtggtgg cgggtgcctg tagtcccagc tactcgagaa 8340 gttgaggcag gaaaatggcg tgaacccagg aggcagagct tgcagtaagc cgagatcgca 8400 ccactgcact ccagcctggg cgacagagcg agactccatc tcaaaaaaaa gaaaaaaaaa 8460 aaaaaaaaaa aaaggaaaac cattttaata gacttttatt tttagagctg ttttaagcta 8520 acagaaaaat tgcagaaatt gtatacagag ctcccccacc cccagtttct acaatgctta 8580 acatcctgta ttaatgtggt acacttgtta caattgatga accaatacta ataattatta 8640 ttaactaaaa ttcatagtta tacgagggtt cactctgtat ta 8682 //