Dbfetch
ID OW971550; SV 1; linear; genomic DNA; STD; HUM; 3350 BP.
XX
AC OW971550;
XX
PR Project:PRJEB50577;
XX
DT 01-FEB-2024 (Rel. 144, Created)
DT 06-FEB-2024 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-C gene for MHC class I antigen, cell line
DE Barretos_BARB4312_C_1, allele HLA-C*04:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Cita F R., Stelet N V.;
RT ;
RL Submitted (20-MAY-2022) to the INSDC.
RL INSTITUTO NACIONAL DE CANCER JOSE ALENCAR GOMES DA SILVA, LABORATORIO DE
RL IMUNOGENETICA, 831 EQUADOR ST. SANTO CRISTO, RIO DE JANEIRO/RJ, Brazil
XX
DR MD5; 523fdce0e6664c6db3c2eeed3637fad5.
XX
FH Key Location/Qualifiers
FH
FT source 1..3350
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="Barretos_BARB4312_C_1"
FT /db_xref="taxon:9606"
FT exon 1..367
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=1
FT CDS join(295..367,498..767,1014..1289,1877..2152,2274..2393,
FT 2833..2865,2973..3020,3185..3189)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAH6411295.1"
FT /translation="MRVMAPRTLILLLSGALALTETWAGSHSMRYFSTSVSWPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWDRETQKYKRQAQADRVNLRK
FT LRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWKPSSQPTIPIVGIVAGLAVLAVLAVLGAMVAVVICRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
FT intron 368..497
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=1
FT exon 498..767
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=2
FT intron 768..1013
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=2
FT exon 1014..1289
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=3
FT intron 1290..1876
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=3
FT exon 1877..2152
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=4
FT intron 2153..2273
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=4
FT exon 2274..2393
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=5
FT intron 2394..2832
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=5
FT exon 2833..2865
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=6
FT intron 2866..2972
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=6
FT exon 2973..3020
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=7
FT intron 3021..3184
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=7
FT exon 3185..3350
FT /gene="HLA-C"
FT /allele="HLA-C*04:new"
FT /number=8
XX
SQ Sequence 3350 BP; 633 A; 969 C; 1048 G; 700 T; 0 other;
aggagaagag gaatcaggac gaagtcccag gtcccgggcg gggctctcag ggtctcaggc 60
tccaagggcc gtgtctgcac tggggaggcg ccgcgttggg gattctccac tcccctgagt 120
ttcacttctt ctcccaacct gcgtcgggtc cttcttcctg aatactcatg acgcgtcccc 180
aattcccact cccattgggt gtcgggttct agagaagcca atcagcgtct ccgcagtccc 240
ggttctaaag tccccagtca cccacccgga ctcagattct ccccagacgc cgagatgcgg 300
gtcatggcgc cccgaaccct catcctgctg ctctcgggag ccctggccct gaccgagacc 360
tgggccggtg agtgcggggt tgggagggaa acggcctctg gggagaggag cgaggggccc 420
gcccggcgag ggcgcaggac ccggggagcc gcgcagggag gagggtcggg cgggtctcag 480
ccactcctcg tccccaggct cccactccat gaggtatttc tccacatccg tgtcctggcc 540
cggccgcggg gagccccgct tcatcgcagt gggctacgtg gacgacacgc agttcgtgcg 600
gttcgacagc gacgccgcga gtccaagagg ggagccgcgg gagccgtggg tggagcagga 660
ggggccggag tattgggacc gggagacaca gaagtacaag cgccaggcac aggctgaccg 720
agtgaacctg cggaaactgc gcggctacta caaccagagc gaggacggtg agtgaccccg 780
gcccggggcg caggtcacga cccctcccca tcccccacgg acggcccggg tcgccccgag 840
tctccccgtc tgagatccac cccgaggctg cggaacccgc ccagaccctc gaccggagag 900
agccccagtc acctttaccc ggtttcattt tcagtttagg ccaaaatccc cgcgggttgg 960
tcgggactgg ggcggggctc gggggaccgg gctgaccacg ggggcggggc cagggtctca 1020
caccctccag aggatgtttg gctgcgacct ggggccggac gggcgcctcc tccgcgggta 1080
taaccagttc gcctacgacg gcaaggatta catcgccctg aacgaggatc tgcgctcctg 1140
gaccgccgcg gacacggcgg ctcagatcac ccagcgcaag tgggaggcgg cccgtgaggc 1200
ggagcagcgg agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga 1260
gaacgggaag gagacgctgc agcgcgcggg taccaggggc agtggggagc cttccccatc 1320
tcccgtagat ctcccgggat ggcctcccac gaggagggga ggaaaatggg atcagcgcta 1380
gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt cctgagtttc ctctgagggc 1440
cccctctgct ctctaggaca attaagggat gaagtccttg aggaaatgga ggggaagaca 1500
gtccctggaa tactgatcag gggtcccctt tgaccacttt gaccactgca gcagctgtgg 1560
tcaggctgct gacctttctc tcaggccttg ttctctgcct gacgctcaat gtgtttgaag 1620
gtttgattcc agcttttctg agtccttcgg cctccactca ggtcaggacc agaagtcgct 1680
gttcctccct cagagactag aactttccaa tgaataggag attatcccag gtgcctgtgt 1740
ccaggctggc gtctgggttc tgtgccccct tccccacccc aggtgtcctg tccattctca 1800
ggatggtcac atgggcgctg ttggagtgtc gcaagagaga tacaaagtgt ctgaattttc 1860
tgactcttcc catcagaaca cccaaagaca cacgtgaccc accatcccgt ctctgaccat 1920
gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg 1980
cagtgggatg gggaggacca aactcaggac accgagcttg tggagaccag gccagcagga 2040
gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga gcagagatac 2100
acgtgccatg ttcagcacga ggggctgccg gagcccctca ccctgagatg gagtaaggag 2160
ggggatgagg ggtgatgtgt cttctcaggg aaagcagaag tcctggagcc cttcagccgg 2220
gtcagggctg aggcttggag gtcagggccc ctcaccttcc cctcctttcc cagagccgtc 2280
ttcccagccc accatcccca tcgtgggcat cgttgctggc ctggctgtcc tggctgtcct 2340
agctgtccta ggagctatgg tggctgttgt gatatgtagg aggaagagct caggtaggga 2400
aggggtgagg agtggggtct gggttttctt gttccactgg gagtttcaag ccccaggtag 2460
aagtgtgccc cacctcgtta ctggaagcac catccacaca tgggccatcc cagcctggga 2520
ccctgtgtgc cagcacttac tctgttgtga agcacatgac aatgaaggac agatgtatca 2580
ccttgatgat tatggtgttg gggtccttga ttccagcatt catgagtcag gggaaggtcc 2640
ctgctaagga cagaccttag gagggcagtt gcttcagaac ccacagctgc tttccccgtg 2700
tttcctgatc ctgccctggg tctgcagtca tagttctgga aacttctctt gggtccaaga 2760
ctaggaggtt cccctaagat cgcatggccc tgcctcctcc ctgtcccctc acagggcatt 2820
ttcttcccac aggtggaaaa ggagggagct gctctcaggc tgcgtgtaag tgatggcggt 2880
gggcgtgtgg aggagctcac ccaccccata attcctcttg tcccacatct cctgcgggct 2940
ctgaccaggt cttttttttt gttctacccc agccagcaac agtgcccagg gctctgatga 3000
gtctctcatc gcttgtaaag gtgagattct ggggagctga agtggtcggg ggtggggcag 3060
agggaaaagg cctaggtaat ggggatcctt tgattgggac gtttcgaatg tgtggtgagc 3120
tgttcagagt gtcatcactt accatgactg acctgaattt gttcatgact attgtgttct 3180
gtagcctgag acagctgcct gtgtgggact gagatgcagg atttcttcac acctctcctt 3240
tgtgacttca agagcctctg gcatctcttt ctgcaaaggc atctgaatgt gtctgcgttc 3300
ctgttagcat aatgtgagga ggtggagaga cagcccaccc ccgtgtccac 3350
//