Dbfetch
ID OW967718; SV 1; linear; genomic DNA; STD; HUM; 3581 BP.
XX
AC OW967718;
XX
PR Project:PRJEB52867;
XX
DT 14-MAR-2023 (Rel. 144, Created)
DT 15-MAR-2023 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-DOA gene for MHC class II antigen, cell line
DE DKMS-LSL_ID20200924_DOA_1, allele HLA-DOA*01:new
XX
KW .
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (18-MAY-2022) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; ec7fb413cc1a4520030faaaf49485389.
XX
FH Key Location/Qualifiers
FH
FT source 1..3581
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID20200924_DOA_1"
FT /db_xref="taxon:9606"
FT exon 1..378
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /number=1
FT CDS join(297..378,1572..1820,2241..2522,2618..2753,2992..2995)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAH5023177.1"
FT /translation="MALRAGLVLGFHTLMTLLSPQEAGATKADHMGSYGPAFYQSYGAS
FT GQFTHEFDEEQLFSVDLKKSEAVWRLPEFGDFARFDPQGGLAGIAAIKAHLDILVERSN
FT RSRAINVPPRVTVLPKSRVELGQPNILICIVDNIFPPVINITWLRNGQTVTEGVAQTSF
FT YSQPDHLFRKFHYLPFVPSAEDVYDCQVEHWGLDAPLLRHWELQVPIPPPDAMETLVCA
FT LGLAIGLVGFLVGTVLIIMGTYVSSVPR"
FT intron 379..1571
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /number=1
FT exon 1572..1820
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /number=2
FT intron 1821..2240
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /number=2
FT exon 2241..2522
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /number=3
FT intron 2523..2617
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /number=3
FT exon 2618..2753
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /number=4
FT intron 2754..2991
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /number=4
FT exon 2992..3581
FT /gene="HLA-DOA"
FT /allele="HLA-DOA*01:new"
FT /number=5
XX
SQ Sequence 3581 BP; 710 A; 1108 C; 871 G; 892 T; 0 other;
tctcttcagg gggtcccttc ttggaggacg tggtaatagt tggtccaagc ccctcccatc 60
ctccaaaact tcctttggcc tctcctgggg gcccagtgaa tccttccacc ttctcacccc 120
ggctctttcc ctctttaccc agcaacagat acattcactc agagaatttc tgtgattggc 180
tgaagacagc aggggtcgcc cccatcctcg aatctgtttt cttcttcttt acctccgcct 240
tgttcctgtc ctcaccacac ggactgagac tgatttgatt aaagcaccag agtgcaatgg 300
ccctcagagc agggctggtc ctggggttcc acaccctgat gaccctcctg agcccgcagg 360
aggcaggggc caccaagggt gagtgcgagg gcgaggaggg tgcggcgggg agcagagatt 420
tacggagttg ggttacatga ggaggtggca tggaggatgc ttgttcctct cgctctctgg 480
tttatgggca acttccttca ccaagagaca cccaatcccc ctcatctctg tcacatccac 540
tctggaccta aatgaagatg cagctcggtc agctgcgcag gtgccccagt cagcctttgc 600
tgacgttcag atttctcctc attccttcct ccttcctgag acccaaacct ccacccaaca 660
gatgccagca agcaccctga tttctctacc acccctggcc gggaatgtgc ccgatcaagt 720
ccagttctgt tgcagtattt atgcccatgc cggtagttaa ctatttacct gtctttgttc 780
ttcgggagac atgagctggg gtgcgggtct acagatggtt catctttttt ttcttttatt 840
tccctggccc accattgtgc tgggtgcatg ctagttcctc aataactgtt gctcaaacaa 900
cttcatagag ttctacaaga attaaaactt aatccctaac ttccagaaaa ctagacaaca 960
gttatggaag agccacactc agtcataatg ctctgagatg gaggaattgg gacatgaacc 1020
ttgacttctg actcctcgtc cagtgctctt tgtaatgcct tgagttgcct ctccctatcc 1080
ccttggtctc tgggtcacta accttaattc ttacccctgc cagccgtggc ctgtttcccc 1140
tcacacccac ctgcactgca tctctgtgca aagctccata ctctcctgtc cttaatcatt 1200
cctcctcatc ccacccccac agtcccacca gctcacaaca cagggcctga caacacagcc 1260
agggcagatg accacagcca agatttaaat tctggagccc caagcatgat tttaggcagt 1320
ccctcctctt cccatcctga tatgccagac tgcactgtct ctgtgccgac tgcagtgtgc 1380
tgggatgagc ctctttcttc ctgttctctc tccctttctc tctcccaggg ccagcccagt 1440
gtcagaacag gactctgtcc ccacacagaa cccaggacgg ggcccaggct cagggactca 1500
acaatcacat attgtggatg agacagacac atttttttct ctctccttga ccctgaactc 1560
gccaaacaca gctgaccaca tgggctccta cggacccgcc ttctaccagt cttacggcgc 1620
ctcgggccag ttcacccatg aatttgatga ggaacagctg ttctctgtgg acctgaagaa 1680
aagcgaggcc gtgtggcgtc tgcctgagtt tggtgacttt gcccgctttg acccgcaggg 1740
cgggctggcc ggcatcgccg caatcaaagc ccatctggac atcctggtgg agcgctccaa 1800
ccgcagcaga gccatcaacg gtaccggccc tccctctgcc cacccagtca ggcgggaagg 1860
tccagagaaa cttcctccca gttcctaggc tcccatcact ctggggcgcg ctctcagcgc 1920
ccgcgcctgt catgccctgt tcctttcttt cccaggaggc tccaggtctt cccagacccc 1980
tttggcaccc ctctccttga ggaatgacac ctctcacccg gactcccgcc cagggaccag 2040
tcaaatatag gagctcctgg cgtccccact ccctccccag tctcctctcc ctctgtttcc 2100
ctcctctcct gccccagtgg ataccccaga gcatcccctg cccacagatg gctacaaagg 2160
gggaacgtcc cttaatccca gtcctagtaa ggccctgggg tgagggatga gcctgtggac 2220
tcagggcctg ttcctcctag tgcctccacg ggtgaccgtg ctccccaagt ctcgggtgga 2280
gctgggccag cccaacatcc tcatctgcat cgtggacaac atcttccccc ctgtgatcaa 2340
tatcacctgg ctgcgcaacg gccaaactgt cactgaggga gtggcccaga ccagcttcta 2400
ttcccagcct gaccatttgt tccgcaagtt ccactacctg cccttcgtgc cctcagccga 2460
ggacgtctat gactgccagg tggagcactg gggcctggat gcgccactcc tcaggcattg 2520
gggtacggag ccccctcccc atgcaccctc ctggccccag gtttccttta ctctagaatc 2580
ctttcatata ccaccaactc cttcctttct ctcctagagc tccaggtgcc tattccacca 2640
ccagatgcca tggagaccct ggtctgtgcc ctgggcctgg ccatcggcct ggtgggcttc 2700
ctcgtgggca ccgtcctcat catcatgggc acatatgtgt ccagtgtccc caggtgcaga 2760
ggccccggga gtctgggggg tgggggagga aagtggatga ctctgaacag gacgtgggtg 2820
gagaatcaga gattctgttg tggggaaaga agtcagaaaa gaaatgggca gggagaaaag 2880
aagcagaggt ggggtgagag agtgaggttt tgggggaggt gggcactcag agataggatc 2940
ccagcatatt gaaattgagc aacctcgatc gtatgttttc tgctatttta ggtaatgatc 3000
cttctgagag aaatgacttg tgggagacac cctgcagatc ctcatgggtt tgtgacagcc 3060
cctgcgtgct cagtgccctt taagtgcatc ccgctgtgct gactttgagt gggatcaaca 3120
tctgtcctac gggtcccctc ttttttggcc ccagtattca tggcagggtt tgttggacac 3180
ctactagctt cccttcccat tcaacacaca cacacattct tgctctaccc aaagctctgg 3240
ctggcagcac taaatgcttt ggtggtgttt gcactgtgtc ctttccaggc cttggccagt 3300
tcttccaggg gtgaggcatg tggtgctggg gattggcagc catcctgggg cccacacagg 3360
tgtgtcttgc tccatttggc ccattgtgtg ttactttgtg aatgagccat ttcacatgga 3420
cttcatgaaa tttgcctcct gagttcaggt ttaccctgag agggatgcag attatcctgt 3480
tcctcacgac cccctcagct aacaacagtt ctgaagggtg ctgggacagg acaggctcat 3540
ggggactcca ctcctgcctg ggtttactct gtatgaagag g 3581
//