Dbfetch

ID   OW967718; SV 1; linear; genomic DNA; STD; HUM; 3581 BP.
XX
AC   OW967718;
XX
PR   Project:PRJEB52867;
XX
DT   14-MAR-2023 (Rel. 144, Created)
DT   15-MAR-2023 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens, HLA-DOA gene for MHC class II antigen, cell line
DE   DKMS-LSL_ID20200924_DOA_1, allele HLA-DOA*01:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT   ;
RL   Submitted (18-MAY-2022) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL   Saxony, 01069 Dresden, Germany
XX
DR   MD5; ec7fb413cc1a4520030faaaf49485389.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3581
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL_ID20200924_DOA_1"
FT                   /db_xref="taxon:9606"
FT   exon            1..378
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /number=1
FT   CDS             join(297..378,1572..1820,2241..2522,2618..2753,2992..2995)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /product="MHC class II antigen"
FT                   /function="antigen presenting molecule"
FT                   /protein_id="CAH5023177.1"
FT                   /translation="MALRAGLVLGFHTLMTLLSPQEAGATKADHMGSYGPAFYQSYGAS
FT                   GQFTHEFDEEQLFSVDLKKSEAVWRLPEFGDFARFDPQGGLAGIAAIKAHLDILVERSN
FT                   RSRAINVPPRVTVLPKSRVELGQPNILICIVDNIFPPVINITWLRNGQTVTEGVAQTSF
FT                   YSQPDHLFRKFHYLPFVPSAEDVYDCQVEHWGLDAPLLRHWELQVPIPPPDAMETLVCA
FT                   LGLAIGLVGFLVGTVLIIMGTYVSSVPR"
FT   intron          379..1571
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /number=1
FT   exon            1572..1820
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /number=2
FT   intron          1821..2240
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /number=2
FT   exon            2241..2522
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /number=3
FT   intron          2523..2617
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /number=3
FT   exon            2618..2753
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /number=4
FT   intron          2754..2991
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /number=4
FT   exon            2992..3581
FT                   /gene="HLA-DOA"
FT                   /allele="HLA-DOA*01:new"
FT                   /number=5
XX
SQ   Sequence 3581 BP; 710 A; 1108 C; 871 G; 892 T; 0 other;
     tctcttcagg gggtcccttc ttggaggacg tggtaatagt tggtccaagc ccctcccatc        60
     ctccaaaact tcctttggcc tctcctgggg gcccagtgaa tccttccacc ttctcacccc       120
     ggctctttcc ctctttaccc agcaacagat acattcactc agagaatttc tgtgattggc       180
     tgaagacagc aggggtcgcc cccatcctcg aatctgtttt cttcttcttt acctccgcct       240
     tgttcctgtc ctcaccacac ggactgagac tgatttgatt aaagcaccag agtgcaatgg       300
     ccctcagagc agggctggtc ctggggttcc acaccctgat gaccctcctg agcccgcagg       360
     aggcaggggc caccaagggt gagtgcgagg gcgaggaggg tgcggcgggg agcagagatt       420
     tacggagttg ggttacatga ggaggtggca tggaggatgc ttgttcctct cgctctctgg       480
     tttatgggca acttccttca ccaagagaca cccaatcccc ctcatctctg tcacatccac       540
     tctggaccta aatgaagatg cagctcggtc agctgcgcag gtgccccagt cagcctttgc       600
     tgacgttcag atttctcctc attccttcct ccttcctgag acccaaacct ccacccaaca       660
     gatgccagca agcaccctga tttctctacc acccctggcc gggaatgtgc ccgatcaagt       720
     ccagttctgt tgcagtattt atgcccatgc cggtagttaa ctatttacct gtctttgttc       780
     ttcgggagac atgagctggg gtgcgggtct acagatggtt catctttttt ttcttttatt       840
     tccctggccc accattgtgc tgggtgcatg ctagttcctc aataactgtt gctcaaacaa       900
     cttcatagag ttctacaaga attaaaactt aatccctaac ttccagaaaa ctagacaaca       960
     gttatggaag agccacactc agtcataatg ctctgagatg gaggaattgg gacatgaacc      1020
     ttgacttctg actcctcgtc cagtgctctt tgtaatgcct tgagttgcct ctccctatcc      1080
     ccttggtctc tgggtcacta accttaattc ttacccctgc cagccgtggc ctgtttcccc      1140
     tcacacccac ctgcactgca tctctgtgca aagctccata ctctcctgtc cttaatcatt      1200
     cctcctcatc ccacccccac agtcccacca gctcacaaca cagggcctga caacacagcc      1260
     agggcagatg accacagcca agatttaaat tctggagccc caagcatgat tttaggcagt      1320
     ccctcctctt cccatcctga tatgccagac tgcactgtct ctgtgccgac tgcagtgtgc      1380
     tgggatgagc ctctttcttc ctgttctctc tccctttctc tctcccaggg ccagcccagt      1440
     gtcagaacag gactctgtcc ccacacagaa cccaggacgg ggcccaggct cagggactca      1500
     acaatcacat attgtggatg agacagacac atttttttct ctctccttga ccctgaactc      1560
     gccaaacaca gctgaccaca tgggctccta cggacccgcc ttctaccagt cttacggcgc      1620
     ctcgggccag ttcacccatg aatttgatga ggaacagctg ttctctgtgg acctgaagaa      1680
     aagcgaggcc gtgtggcgtc tgcctgagtt tggtgacttt gcccgctttg acccgcaggg      1740
     cgggctggcc ggcatcgccg caatcaaagc ccatctggac atcctggtgg agcgctccaa      1800
     ccgcagcaga gccatcaacg gtaccggccc tccctctgcc cacccagtca ggcgggaagg      1860
     tccagagaaa cttcctccca gttcctaggc tcccatcact ctggggcgcg ctctcagcgc      1920
     ccgcgcctgt catgccctgt tcctttcttt cccaggaggc tccaggtctt cccagacccc      1980
     tttggcaccc ctctccttga ggaatgacac ctctcacccg gactcccgcc cagggaccag      2040
     tcaaatatag gagctcctgg cgtccccact ccctccccag tctcctctcc ctctgtttcc      2100
     ctcctctcct gccccagtgg ataccccaga gcatcccctg cccacagatg gctacaaagg      2160
     gggaacgtcc cttaatccca gtcctagtaa ggccctgggg tgagggatga gcctgtggac      2220
     tcagggcctg ttcctcctag tgcctccacg ggtgaccgtg ctccccaagt ctcgggtgga      2280
     gctgggccag cccaacatcc tcatctgcat cgtggacaac atcttccccc ctgtgatcaa      2340
     tatcacctgg ctgcgcaacg gccaaactgt cactgaggga gtggcccaga ccagcttcta      2400
     ttcccagcct gaccatttgt tccgcaagtt ccactacctg cccttcgtgc cctcagccga      2460
     ggacgtctat gactgccagg tggagcactg gggcctggat gcgccactcc tcaggcattg      2520
     gggtacggag ccccctcccc atgcaccctc ctggccccag gtttccttta ctctagaatc      2580
     ctttcatata ccaccaactc cttcctttct ctcctagagc tccaggtgcc tattccacca      2640
     ccagatgcca tggagaccct ggtctgtgcc ctgggcctgg ccatcggcct ggtgggcttc      2700
     ctcgtgggca ccgtcctcat catcatgggc acatatgtgt ccagtgtccc caggtgcaga      2760
     ggccccggga gtctgggggg tgggggagga aagtggatga ctctgaacag gacgtgggtg      2820
     gagaatcaga gattctgttg tggggaaaga agtcagaaaa gaaatgggca gggagaaaag      2880
     aagcagaggt ggggtgagag agtgaggttt tgggggaggt gggcactcag agataggatc      2940
     ccagcatatt gaaattgagc aacctcgatc gtatgttttc tgctatttta ggtaatgatc      3000
     cttctgagag aaatgacttg tgggagacac cctgcagatc ctcatgggtt tgtgacagcc      3060
     cctgcgtgct cagtgccctt taagtgcatc ccgctgtgct gactttgagt gggatcaaca      3120
     tctgtcctac gggtcccctc ttttttggcc ccagtattca tggcagggtt tgttggacac      3180
     ctactagctt cccttcccat tcaacacaca cacacattct tgctctaccc aaagctctgg      3240
     ctggcagcac taaatgcttt ggtggtgttt gcactgtgtc ctttccaggc cttggccagt      3300
     tcttccaggg gtgaggcatg tggtgctggg gattggcagc catcctgggg cccacacagg      3360
     tgtgtcttgc tccatttggc ccattgtgtg ttactttgtg aatgagccat ttcacatgga      3420
     cttcatgaaa tttgcctcct gagttcaggt ttaccctgag agggatgcag attatcctgt      3480
     tcctcacgac cccctcagct aacaacagtt ctgaagggtg ctgggacagg acaggctcat      3540
     ggggactcca ctcctgcctg ggtttactct gtatgaagag g                          3581
//