Dbfetch
ID OW525816; SV 1; linear; genomic DNA; STD; HUM; 3848 BP. XX AC OW525816; XX PR Project:PRJEB52152; XX DT 14-MAR-2023 (Rel. 144, Created) DT 15-MAR-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-DOB gene for MHC class II antigen, cell line DE DKMS-LSL_ID20200921_DOB_1, allele HLA-DOB*01:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (11-APR-2022) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; 856067e3a8e672e447724520d04d9d02. XX FH Key Location/Qualifiers FH FT source 1..3848 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID20200921_DOB_1" FT /db_xref="taxon:9606" FT exon 1..201 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=1 FT CDS join(111..201,1749..2018,2461..2742,3228..3338,3590..3621, FT 3810..3845) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH2618834.1" FT /translation="MGSGWVPWVVALLVNLTRLDSSMTQGTDSPEDFVIQAKADCYFTN FT GTEKVQFVVRFIFNLEEYVRFDSDVGMFVALTKLGQPDAEQWNSRLDLLERSRQAVDGV FT CRHNYRLGAPFTVGRKVQPEVTVYPERTPLLHQHNLLHCSVTGFYPGDIKIKWFLNGQE FT ERAGVMSTGPIRNGDWTFQTVVMLEMTPELGHVYTCLVDHSSLLSPVSVEWRAQSEYSW FT RKMLSGIAAFLLGLIFLLVGIVIQLRAQKGYVRTQMSGNEVSRAVLLPQSC" FT intron 202..1748 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=1 FT exon 1749..2018 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=2 FT intron 2019..2460 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=2 FT exon 2461..2742 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=3 FT intron 2743..3227 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=3 FT exon 3228..3338 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=4 FT intron 3339..3589 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=4 FT exon 3590..3621 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=5 FT intron 3622..3809 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=5 FT exon 3810..3848 FT /gene="HLA-DOB" FT /allele="HLA-DOB*01:new" FT /number=6 XX SQ Sequence 3848 BP; 957 A; 791 C; 943 G; 1157 T; 0 other; ccagaaaaac agcgatttat actcttaatg ggtactttct gactgaattt tatgaactca 60 ttctgaagag gctgacgatt ttactgtctc atttttttcc tttctccaga atgggttctg 120 ggtgggtccc ctgggtggtg gctctgctag tgaatctgac ccgactggat tcctccatga 180 ctcaaggcac agactctcca ggtaagaaca gagcaattat ttttttccag tgtgtatgca 240 agaattggca tgggggagtg atgcctttct ttgtaagtcc aggccacaga ccagactgga 300 agtggctttt ggtttcaaag aacagtgttc ttccctttgg cagaaaggta cgccttgcct 360 ctttacatgg gatggacttc atataccaga gccacctatt caaggggtag ggaggcagga 420 agagggaaac attgtgtctt gtttaggatc cttattgtgt gtatcaacct cagtcagtgc 480 ctgggcgtgt tgaaggcctt ggcttgggtt cgagcctgct gggagaaaca acctgcagta 540 ggctgggtca cagaggcaat ctgtgatttt ttggtcagga cacggaaaca aatctcagtt 600 ggggtatatg tggacaaatg aaactggaaa caaaggttgc tccttctgtc atttattaag 660 ccactattat attgtcagaa ttgtactaaa cagttttgag aagtaagaga agttgaatag 720 aatacattgt ccttgtcctc cggctaccag gtacaagtta cttgtaactg ttatttttct 780 agcacaggtg acagaatatg cagccatgaa gcaatgtgag atgaaagcac atattaatga 840 gcagaaacag gatgtaatgt gctaagaaca gaatcccctt tgcatgttag tttcattaaa 900 tacaaaagag gaacaaacct ggccaggaga gatcattatt cttagagaat agaaaccgcc 960 ctgagtttat aatgtccatt aaacaataca actgaaaaaa aaatcagcac agatgttaaa 1020 tgatgatgaa aaattcagat ttcccccctg gtttagacta ctagaggaaa tagagaagag 1080 tatacatgct gagaaattac aggctggaac ttcatctgaa attagctact gagtgaggga 1140 taagtggggt tcacccagga aggtcattct tatggctcag ttcagagttg gaggaggctt 1200 ctgaacttag aaaggaaagt aaattacaac ccaacattaa tagcaattat ctttcaagtc 1260 ttgacttaga tgcaatgtct tcaggacgtc cttcctgact tacctacatt attaactcca 1320 tttgaatttc ctttttattg tagttgttgt tcttaagtgc ataggattgg tttaatttta 1380 cccaatgagt tcacagcaca ttgtaattat tggcagtagt gcaagactct ctcgtctctt 1440 ctcttgcctc cgttctcatt ctctcccctc cctagagaat ccattctaaa cgtgtctggt 1500 atgtctctaa gtatgagagt ggcttttaga aatatgtagc attattgctc tttatgtgtt 1560 tttaaaattt aataaatgtc attctctgtt gaatcccatt ctgtttcttt tctcacttga 1620 cactgtgctt tttgagcata ctgaggtcaa aggcctcctc ttagatccat gtggtctgac 1680 gtaatttacc aggcatgggt tttcccagag gagggggctg gttcatggtt ttggttttgg 1740 ttttccagaa gattttgtga ttcaggcaaa ggctgactgt tacttcacca acgggacaga 1800 aaaggtgcag tttgtggtca gattcatctt taacttggag gagtatgtac gtttcgacag 1860 tgatgtgggg atgtttgtgg cattgaccaa gctggggcag ccagatgctg agcagtggaa 1920 cagccggctg gatctcttgg agaggagcag acaggccgtg gatggggtct gtagacacaa 1980 ctacaggctg ggcgcaccct tcactgtggg gagaaaaggt gagctggaag ctgaggtctg 2040 gcggggctca ggaatgtccc ccatgtgaac ctggccatgg ctcttctttc ttacaagcaa 2100 ttttctgctt taggataaat ggttgtctgt gtagatgttc tggccccagc tgtgatatat 2160 tatcctcaca agtcagccac tgtgatcttg gtctcagacc cccaaggttc tcagggactt 2220 cgagggctat tgtaccctca aagagaagca gtaattatgg gagtacctca gaaagtctaa 2280 atcctcctga caggcattga cataccctgt tactgatctt gggggctgag acttgcctat 2340 actttgtgtt cacttgggtg atctgggaaa gagattagac atagtgatag tccctaaaga 2400 atctcctgtc ccagcttggt ggttttcttt cacggtgtct catttttcct ctcttcctag 2460 tgcaaccaga ggtgacagtg tacccagaga ggaccccact cctgcaccag cataatctgc 2520 tgcactgctc tgtgacaggc ttctatccag gggatatcaa gatcaagtgg ttcctgaatg 2580 ggcaggagga gagagctggg gtcatgtcca ctggccctat caggaatgga gactggacct 2640 ttcagactgt ggtgatgcta gaaatgactc ctgaacttgg acatgtctac acctgccttg 2700 tcgatcactc cagcctgctg agccctgttt ctgtggagtg gagtgagaat tagtttctag 2760 tactctctgg gcctgactca ggactatact gactcaatac agagcctggg cacttctgcg 2820 tttatcttgg tcacaacatg aattattctt tcccttgatc tgggacagtc acagaaacca 2880 gagtccttgg gttagggtgg gagaaaacat ggcagatatc tatcctcata tcttccaaga 2940 aatgaggaga tctaatcacc tcattatgtg cttccaaccc tatgaactgg tgtcctctaa 3000 ttctttggtc ttagtattta ggaggcattc ttatgggctg tgagaatctg taaccgatgg 3060 gtggtaactc catgggtgcc aactttggtt tcgaagaacc ttttctaaat ttatttattt 3120 ttctctagct agcattggat ttggtgtcta gtacagattc tgggattcca agaaagtgct 3180 ttaaatattg ggatattttt actaatttaa agacctgttt cccataggag ctcagtctga 3240 atattcttgg agaaagatgc tgagtggcat tgcagccttc ctacttgggc taatcttcct 3300 tctggtggga atcgtcatcc agctaagggc tcagaaaggt aatgagcctg tgaggagtgc 3360 cctgccacct gtcccagacc ttccccactc ccaccttccc taacgtcaat gatctgaggc 3420 aaggaaagct gattgtgcct ctcagggatc accgggataa tttttttctg aagctagaaa 3480 tgggataagc agggagagtg ctgaccttgc cagccatttg ttcttccctc gggataatca 3540 tattgggtcc taattggggc aatccattct tttctcgatt tctttccagg atatgtgagg 3600 acgcagatgt ctggtaatga ggtaatgtct ctttttcctt gtctttgagt ggcagatcat 3660 tctcccggtt ctttggccag agggagatga catgggggta gggaggagta aggttgctgc 3720 tgtctggatg ggactgtccc ctgagtctct ggaacggctg tggggggtgg tgaggctgcc 3780 tcctgagacc ttcatcactg tgcctccagg tctcaagagc tgttctgctc cctcagtcat 3840 gctaaggt 3848 //