Dbfetch
ID OW525780; SV 1; linear; genomic DNA; STD; HUM; 3849 BP.
XX
AC OW525780;
XX
PR Project:PRJEB52152;
XX
DT 14-MAR-2023 (Rel. 144, Created)
DT 15-MAR-2023 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-DOB gene for MHC class II antigen, cell line
DE DKMS-LSL_ID19880242_DOB_1, allele HLA-DOB*01:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (11-APR-2022) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 9c5da576016b8c5f32afafd4c249223d.
XX
FH Key Location/Qualifiers
FH
FT source 1..3849
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID19880242_DOB_1"
FT /db_xref="taxon:9606"
FT exon 1..201
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=1
FT CDS join(111..201,1749..2018,2461..2742,3229..3339,3591..3622,
FT 3811..3846)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAH2618798.1"
FT /translation="MGSGWVPWVVALLVNLTRLDSSMTQGTDSPEDFVIQAKADCYFTN
FT GTEKVQFVVRFIFNLEEYVRFDSDVGMFVALTKLGQPDAEQWNSRLDLLERSRQAVDGV
FT CRHNYRLGAPFTVGRKVQPEVTVYPERTPLLHQHNLLHCSVTGFYPGDIKIKWFLNGQE
FT ERAGVMSTGPIRNGDWTFQTVVMLEMTPELGHVYTCLVDHSSLLSPVSVEWRAQSEYSW
FT RKMLSGIAAFLLGLIFLLVGIVIQLRAQKGYVRTQMSGNEVSRAVLLPQSC"
FT intron 202..1748
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=1
FT exon 1749..2018
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=2
FT intron 2019..2460
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=2
FT exon 2461..2742
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=3
FT intron 2743..3228
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=3
FT exon 3229..3339
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=4
FT intron 3340..3590
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=4
FT exon 3591..3622
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=5
FT intron 3623..3810
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=5
FT exon 3811..3849
FT /gene="HLA-DOB"
FT /allele="HLA-DOB*01:new"
FT /number=6
XX
SQ Sequence 3849 BP; 956 A; 793 C; 942 G; 1158 T; 0 other;
ccagaaaaac agcgatttat actcttaatg ggtactttct gactgaattt tatgaactca 60
ttctgaagag gctgacgatt ttactgtctc atttttttcc tttctccaga atgggttctg 120
ggtgggtccc ctgggtggtg gctctgctag tgaatctgac ccgactggat tcctccatga 180
ctcaaggcac agactctcca ggtaagaaca gagcaattat ttttttccag tgtgtatgca 240
agaattggca tgggggagtg atgcctttct ttgtaagtcc aggccacaga ccagactgga 300
agtggctttt ggtttcaaag aacagtgttc ttccctttgg cagaaaggta cgccttgcct 360
ctttacatgg gatggacttc atataccaga gccacctatt caaggggtag ggaggcagga 420
agagggaaac attgtgtctt gtttaggatc cttattgtgt gtatcaacct cagtcagtgc 480
ctgggcgtgt tgaaggcctt ggcttgggtt cgagcctgct gggagaaaca acctgcagta 540
ggctgggtca cagaggcaat ctgtgatttt ttggtcagga cacggaaaca aatctcagtt 600
ggggtatatg tggacaaatg aaactggaaa caaaggttgc tccttctgtc atttattaag 660
ccactattat attgtcagaa ttgtactaaa cagttttgag aagtaagaga agttgaatag 720
aatacattgt ccttgtcctc cggctaccag gtacaagtta cttgtaactg ttatttttct 780
agcacaggtg acagaatatg cagccatgaa gcaatgtgag atgaaagcac atattaatga 840
gcagaaacag gatgtaatgt gctaagaaca gaatcccctt tgcatgttag tttcattaaa 900
tacaaaagag gaacaaacct ggccaggaga gatcattatt cttagagaat agaaaccgcc 960
ctgagtttat aatgtccatt aaacaataca actgaaaaaa aaatcagcac agatgttaaa 1020
tgatgatgaa aaattcagat ttcccccctg gtttagacta ctagaggaaa tagagaagag 1080
tatacatgct gagaaattac aggctggaac ttcatctgaa attagctact gagtgaggga 1140
taagtggggt tcacccagga aggtcattct tatggctcag ttcagagttg gaggaggctt 1200
ctgaacttag aaaggaaagt aaattacaac ccaacattaa tagcaattat ctttcaagtc 1260
ttgacttaga tgcaatgtct tcaggacgtc cttcctgact tacctacatt attaactcca 1320
tttgaatttc ctttttattg tagttgttgt tcttaagtgc ataggattgg tttaatttta 1380
cccaatgagt tcacagcaca ttgtaattat tggcagtagt gcaagactct ctcgtctctt 1440
ctcttgcctc cgttctcatt ctctcccctc cctagagaat ccattctaaa cgtgtctggt 1500
atgtctctaa gtatgagagt ggcttttaga aatatgtagc attcttgctc tttatgtgtt 1560
tttaaaattt aataaatgtc attctctgtt gaatcccatt ctgtttcttt tctcacttga 1620
cactgtgctt tttgagcata ctgaggtcaa aggcctcctc ttagatccat gtggtctgac 1680
gtaatttacc aggcatgggt tttcccagag gagggggctg gttcatggtt ttggttttgg 1740
ttttccagaa gattttgtga ttcaggcaaa ggctgactgt tacttcacca acgggacaga 1800
aaaggtgcag tttgtggtca gattcatctt taacttggag gagtatgtac gtttcgacag 1860
tgatgtgggg atgtttgtgg cattgaccaa gctggggcag ccagatgctg agcagtggaa 1920
cagccggctg gatctcttgg agaggagcag acaggccgtg gatggggtct gtagacacaa 1980
ctacaggctg ggcgcaccct tcactgtggg gagaaaaggt gagctggaag ctgaggtctg 2040
gcggggctca ggaatgtccc ccatgtgaac ctggccatgg ctcttctttc ttacaagcaa 2100
ttttctgctt taggataaat ggttgtctgt gtagatgttc tggccccagc tgtgatatat 2160
tatcctcaca agtcagccac tgtgatcttg gtctcagacc cccaaggttc tcagggactt 2220
cgagggctat tgtaccctca aagagaagca gtaattatgg gagtacctca gaaagtctaa 2280
atcctcctga caggcattga cataccctgt tactgatctt gggggctgag acttgcctat 2340
actttgtgtt cacttgggtg atctgggaaa gagattagac atagtgatag tccctaaaga 2400
atctcctgtc ccagcttggt ggttttcttt cacggtgtct catttttcct cccttcctag 2460
tgcaaccaga ggtgacagtg tacccagaga ggaccccact cctgcaccag cataatctgc 2520
tgcactgctc tgtgacaggc ttctatccag gggatatcaa gatcaagtgg ttcctgaatg 2580
ggcaggagga gagagctggg gtcatgtcca ctggccctat caggaatggg gactggacct 2640
ttcagactgt ggtgatgcta gaaatgactc ctgaacttgg acatgtctac acctgccttg 2700
tcgatcactc cagcctgctg agccctgttt ctgtggagtg gagtgagaat tagtttctag 2760
tactctctgg gcctgactca ggactatact gactcaatac agagcctgtg tcacttctgc 2820
gtttatcttg gtcacaacat gaattattct ttcccttgat ctgggacagt cacagaaacc 2880
agagtccttg ggttagggtg ggagaaaaca tggcagatat ctatcctcat atcttccaag 2940
aaatgaggag atctaatcac ctcattatgt gcttccaacc ctatgaactg gtgtcctcta 3000
attctttggt cttagtattt aggaggcatt cttatgggct gtgagaatct gtaaccgatg 3060
ggtggtaact ccatgggtgc caactttggt ttcgaagaac cttttctaaa tttatttatt 3120
tttctctagc tagcattgga tttggtgtct agtacagatt ctgggattcc aagaaagtgc 3180
tttaaatatt gggatatttt tactaattta aagacctgtt tcccatagga gctcagtctg 3240
aatattcttg gagaaagatg ctgagtggca ttgcagcctt cctacttggg ctaatcttcc 3300
ttctggtggg aatcgtcatc cagctaaggg ctcagaaagg taatgagcct gtgaggagtg 3360
ccctgccacc tgtcccagac cttccccact cccaccttcc ctaacgtcaa tgatctgagg 3420
caaggaaagc tgattgtgcc tctcagggat caccgggata atttttttct gaagctagaa 3480
atgggataag cagagagagt gctgaccttg ccagccattt gttcttccct cgggataatc 3540
atattgggtc ctaattgggg caatccattc ttttctcgat ttctttccag gatatgtgag 3600
gacgcagatg tctggtaatg aggtaatgtc tctttttcct tgtctttgag tggcagatca 3660
ttctcccggt tctttggcca gagggagatg acatgggggt agggaggagt aaggttgctg 3720
ctgtctggat gggactgtcc cctgagtctc tggaacggct gtggggggtg gtgaggctgc 3780
ctcctgagac cttcatcact gtgcctccag gtctcaagag ctgttctgct ccctcagtca 3840
tgctaaggt 3849
//