Dbfetch

ID   OW525780; SV 1; linear; genomic DNA; STD; HUM; 3849 BP.
XX
AC   OW525780;
XX
PR   Project:PRJEB52152;
XX
DT   14-MAR-2023 (Rel. 144, Created)
DT   15-MAR-2023 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens, HLA-DOB gene for MHC class II antigen, cell line
DE   DKMS-LSL_ID19880242_DOB_1, allele HLA-DOB*01:new
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT   ;
RL   Submitted (11-APR-2022) to the INSDC.
RL   DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL   Saxony, 01069 Dresden, Germany
XX
DR   MD5; 9c5da576016b8c5f32afafd4c249223d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3849
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="DKMS-LSL_ID19880242_DOB_1"
FT                   /db_xref="taxon:9606"
FT   exon            1..201
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=1
FT   CDS             join(111..201,1749..2018,2461..2742,3229..3339,3591..3622,
FT                   3811..3846)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /product="MHC class II antigen"
FT                   /function="antigen presenting molecule"
FT                   /protein_id="CAH2618798.1"
FT                   /translation="MGSGWVPWVVALLVNLTRLDSSMTQGTDSPEDFVIQAKADCYFTN
FT                   GTEKVQFVVRFIFNLEEYVRFDSDVGMFVALTKLGQPDAEQWNSRLDLLERSRQAVDGV
FT                   CRHNYRLGAPFTVGRKVQPEVTVYPERTPLLHQHNLLHCSVTGFYPGDIKIKWFLNGQE
FT                   ERAGVMSTGPIRNGDWTFQTVVMLEMTPELGHVYTCLVDHSSLLSPVSVEWRAQSEYSW
FT                   RKMLSGIAAFLLGLIFLLVGIVIQLRAQKGYVRTQMSGNEVSRAVLLPQSC"
FT   intron          202..1748
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=1
FT   exon            1749..2018
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=2
FT   intron          2019..2460
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=2
FT   exon            2461..2742
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=3
FT   intron          2743..3228
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=3
FT   exon            3229..3339
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=4
FT   intron          3340..3590
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=4
FT   exon            3591..3622
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=5
FT   intron          3623..3810
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=5
FT   exon            3811..3849
FT                   /gene="HLA-DOB"
FT                   /allele="HLA-DOB*01:new"
FT                   /number=6
XX
SQ   Sequence 3849 BP; 956 A; 793 C; 942 G; 1158 T; 0 other;
     ccagaaaaac agcgatttat actcttaatg ggtactttct gactgaattt tatgaactca        60
     ttctgaagag gctgacgatt ttactgtctc atttttttcc tttctccaga atgggttctg       120
     ggtgggtccc ctgggtggtg gctctgctag tgaatctgac ccgactggat tcctccatga       180
     ctcaaggcac agactctcca ggtaagaaca gagcaattat ttttttccag tgtgtatgca       240
     agaattggca tgggggagtg atgcctttct ttgtaagtcc aggccacaga ccagactgga       300
     agtggctttt ggtttcaaag aacagtgttc ttccctttgg cagaaaggta cgccttgcct       360
     ctttacatgg gatggacttc atataccaga gccacctatt caaggggtag ggaggcagga       420
     agagggaaac attgtgtctt gtttaggatc cttattgtgt gtatcaacct cagtcagtgc       480
     ctgggcgtgt tgaaggcctt ggcttgggtt cgagcctgct gggagaaaca acctgcagta       540
     ggctgggtca cagaggcaat ctgtgatttt ttggtcagga cacggaaaca aatctcagtt       600
     ggggtatatg tggacaaatg aaactggaaa caaaggttgc tccttctgtc atttattaag       660
     ccactattat attgtcagaa ttgtactaaa cagttttgag aagtaagaga agttgaatag       720
     aatacattgt ccttgtcctc cggctaccag gtacaagtta cttgtaactg ttatttttct       780
     agcacaggtg acagaatatg cagccatgaa gcaatgtgag atgaaagcac atattaatga       840
     gcagaaacag gatgtaatgt gctaagaaca gaatcccctt tgcatgttag tttcattaaa       900
     tacaaaagag gaacaaacct ggccaggaga gatcattatt cttagagaat agaaaccgcc       960
     ctgagtttat aatgtccatt aaacaataca actgaaaaaa aaatcagcac agatgttaaa      1020
     tgatgatgaa aaattcagat ttcccccctg gtttagacta ctagaggaaa tagagaagag      1080
     tatacatgct gagaaattac aggctggaac ttcatctgaa attagctact gagtgaggga      1140
     taagtggggt tcacccagga aggtcattct tatggctcag ttcagagttg gaggaggctt      1200
     ctgaacttag aaaggaaagt aaattacaac ccaacattaa tagcaattat ctttcaagtc      1260
     ttgacttaga tgcaatgtct tcaggacgtc cttcctgact tacctacatt attaactcca      1320
     tttgaatttc ctttttattg tagttgttgt tcttaagtgc ataggattgg tttaatttta      1380
     cccaatgagt tcacagcaca ttgtaattat tggcagtagt gcaagactct ctcgtctctt      1440
     ctcttgcctc cgttctcatt ctctcccctc cctagagaat ccattctaaa cgtgtctggt      1500
     atgtctctaa gtatgagagt ggcttttaga aatatgtagc attcttgctc tttatgtgtt      1560
     tttaaaattt aataaatgtc attctctgtt gaatcccatt ctgtttcttt tctcacttga      1620
     cactgtgctt tttgagcata ctgaggtcaa aggcctcctc ttagatccat gtggtctgac      1680
     gtaatttacc aggcatgggt tttcccagag gagggggctg gttcatggtt ttggttttgg      1740
     ttttccagaa gattttgtga ttcaggcaaa ggctgactgt tacttcacca acgggacaga      1800
     aaaggtgcag tttgtggtca gattcatctt taacttggag gagtatgtac gtttcgacag      1860
     tgatgtgggg atgtttgtgg cattgaccaa gctggggcag ccagatgctg agcagtggaa      1920
     cagccggctg gatctcttgg agaggagcag acaggccgtg gatggggtct gtagacacaa      1980
     ctacaggctg ggcgcaccct tcactgtggg gagaaaaggt gagctggaag ctgaggtctg      2040
     gcggggctca ggaatgtccc ccatgtgaac ctggccatgg ctcttctttc ttacaagcaa      2100
     ttttctgctt taggataaat ggttgtctgt gtagatgttc tggccccagc tgtgatatat      2160
     tatcctcaca agtcagccac tgtgatcttg gtctcagacc cccaaggttc tcagggactt      2220
     cgagggctat tgtaccctca aagagaagca gtaattatgg gagtacctca gaaagtctaa      2280
     atcctcctga caggcattga cataccctgt tactgatctt gggggctgag acttgcctat      2340
     actttgtgtt cacttgggtg atctgggaaa gagattagac atagtgatag tccctaaaga      2400
     atctcctgtc ccagcttggt ggttttcttt cacggtgtct catttttcct cccttcctag      2460
     tgcaaccaga ggtgacagtg tacccagaga ggaccccact cctgcaccag cataatctgc      2520
     tgcactgctc tgtgacaggc ttctatccag gggatatcaa gatcaagtgg ttcctgaatg      2580
     ggcaggagga gagagctggg gtcatgtcca ctggccctat caggaatggg gactggacct      2640
     ttcagactgt ggtgatgcta gaaatgactc ctgaacttgg acatgtctac acctgccttg      2700
     tcgatcactc cagcctgctg agccctgttt ctgtggagtg gagtgagaat tagtttctag      2760
     tactctctgg gcctgactca ggactatact gactcaatac agagcctgtg tcacttctgc      2820
     gtttatcttg gtcacaacat gaattattct ttcccttgat ctgggacagt cacagaaacc      2880
     agagtccttg ggttagggtg ggagaaaaca tggcagatat ctatcctcat atcttccaag      2940
     aaatgaggag atctaatcac ctcattatgt gcttccaacc ctatgaactg gtgtcctcta      3000
     attctttggt cttagtattt aggaggcatt cttatgggct gtgagaatct gtaaccgatg      3060
     ggtggtaact ccatgggtgc caactttggt ttcgaagaac cttttctaaa tttatttatt      3120
     tttctctagc tagcattgga tttggtgtct agtacagatt ctgggattcc aagaaagtgc      3180
     tttaaatatt gggatatttt tactaattta aagacctgtt tcccatagga gctcagtctg      3240
     aatattcttg gagaaagatg ctgagtggca ttgcagcctt cctacttggg ctaatcttcc      3300
     ttctggtggg aatcgtcatc cagctaaggg ctcagaaagg taatgagcct gtgaggagtg      3360
     ccctgccacc tgtcccagac cttccccact cccaccttcc ctaacgtcaa tgatctgagg      3420
     caaggaaagc tgattgtgcc tctcagggat caccgggata atttttttct gaagctagaa      3480
     atgggataag cagagagagt gctgaccttg ccagccattt gttcttccct cgggataatc      3540
     atattgggtc ctaattgggg caatccattc ttttctcgat ttctttccag gatatgtgag      3600
     gacgcagatg tctggtaatg aggtaatgtc tctttttcct tgtctttgag tggcagatca      3660
     ttctcccggt tctttggcca gagggagatg acatgggggt agggaggagt aaggttgctg      3720
     ctgtctggat gggactgtcc cctgagtctc tggaacggct gtggggggtg gtgaggctgc      3780
     ctcctgagac cttcatcact gtgcctccag gtctcaagag ctgttctgct ccctcagtca      3840
     tgctaaggt                                                              3849
//