Dbfetch
ID OW496051; SV 1; linear; genomic DNA; STD; HUM; 8673 BP. XX AC OW496051; XX PR Project:PRJEB52229; XX DT 28-APR-2022 (Rel. 144, Created) DT 29-APR-2022 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-DRA gene for MHC class II antigen, allele DE HLA-DRA*01:02:02:NEW2 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Turner R T.; RT ; RL Submitted (08-APR-2022) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, The Royal Free Hospital, Pond Street, RL London, NW3 2QU, United Kingdom XX DR MD5; 944bfb188cd374718adf16f316094115. XX FH Key Location/Qualifiers FH FT source 1..8673 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="NA14660" FT /db_xref="taxon:9606" FT CDS join(1449..1530,3944..4189,4681..4962,5252..5406) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:02:02:NEW2" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH2618655.1" FT /translation="MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSG FT EFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY FT TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFL FT PREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCAL FT GLTVGLVGIIIGTIFIIKGLRKSNAAERRGPL" FT exon 1449..1530 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:02:02:NEW2" FT /number=1 FT intron 1531..3943 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:02:02:NEW2" FT /number=1 FT exon 3944..4189 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:02:02:NEW2" FT /number=2 FT intron 4190..4680 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:02:02:NEW2" FT /number=2 FT exon 4681..4962 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:02:02:NEW2" FT /number=3 FT intron 4963..5251 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:02:02:NEW2" FT /number=3 FT exon 5252..5406 FT /gene="HLA-DRA" FT /allele="HLA-DRA*01:02:02:NEW2" FT /number=4 XX SQ Sequence 8673 BP; 2528 A; 1800 C; 1847 G; 2498 T; 0 other; ctccctcact gccaggtcac tcttcatgga agtatttgta ttccagtcct ttctgtggaa 60 agaaattaac attctccttt tcataacact gtatcttcag aaacaagaga gtcgaagtct 120 cctaattttc aggactgtct atgttgaaca tcaaaatata ttctttagag cagatcttta 180 ataatcatat gacaaaagaa aaactttcat aatcttatga catgagggaa ggaatattaa 240 agccgttctg tgggttatta tctctaacgt tcccaataga ataggctttg ccagctgggt 300 gcggtggctc atgcctgtaa tcccagcact ttgcgaggcc aaggcgggca aatcacgagg 360 tcaggagtct gagaccagcc tgaccaacat ggtgaaaccc cgtctctact aaaaatacaa 420 aaattatccg ggcatggtgg tgggcgcctg taatcccagc tactcaggag gctgaggcag 480 gagaatcgct tgaacccggg aggcggagat tacaatgagc tgagatcacg ccaccaactc 540 cagcttgggc gacagagcaa gactctgtct aaaaaaaaaa aaaaaaaaaa agaataggct 600 ttgcccacta tactctctca tattcattga cctgaatcct caaatgaggt gtgtccatta 660 gtcaactcca atctcttgtc atatataaga tggtagagat gagaagaagg tagctccttt 720 acagcccact atttccacta actactacct gtgtttcaag atacagcctt tcatccttct 780 ccagtgttga gagtgttgaa cctcagagtt tctcctctca ttttctctaa atgagataca 840 atgccagcca tcccaagctc ttggcctgag ttgatcatct tgaagtctag gactccaaga 900 agcatgaaag agcttcttta gtgaagctat gtcctcagta ctgccaaaat tcagacaatc 960 tccatggcct gacaatttac cttctatttg ggtaatttat tgtcccttac gcaaactctc 1020 caactgtcat tgcacagaca tatgatctgt atttagctct cactttaggt gtttccattg 1080 attctattct cactaatgtg cttcaggtat atccctgtct agaagtcaga ttggggttaa 1140 agagtctgtc cgtgattgac taacagtctt aaatacttga tttgttgttg ttgttgtcct 1200 gtttgtttaa gaactttact tctttatcca atgaacggag tatcttgtgt cctggaccct 1260 ttgcaagaac ccttccccta gcaacagatg cgtcatctca aaatattttt ctgattggcc 1320 aaagagtaat tgatttgcat tttaatggtc agactctatt acaccccaca ttctcttttc 1380 ttttattctt gtctgttctg cctcactccc gagctctact gactcccaac agagcgccca 1440 agaagaaaat ggccataagt ggagtccctg tgctaggatt tttcatcata gctgtgctga 1500 tgagcgctca ggaatcatgg gctatcaaag gtaggtgctg agggaatgaa atctgggacg 1560 atagactacg aagcattgga gaaaagacct atggacattt ggaagataat gtgtggagtg 1620 aaagaatagt gtgacaggta ttatgtggtc tcgacagaaa gtataacaaa ttgtggtttg 1680 gtggagttct tccctcacca caaactgaag taagtcaaat ttggtttaga gggtcaaaac 1740 tgagttgtgt attgatgaat agcacggtcc tgctacaagc caaactgggg gtgggggtgg 1800 gggtggggga ggaagaatat tttctggcaa gcattaacaa gttatatttc tgggctttaa 1860 ttattctttc tggaaaatta gtaaaattaa aaactaaaaa ccacacatag ttttgctaga 1920 attaaatgaa aaaaaaagtt attagccctg ttcttatctg aatacatgat acagtagtta 1980 ttttttggag tgtaaatcct gtcggtatat attgagcaca tatattgtgt tgaagattac 2040 tagaaggaaa agtcatcaaa aagcaacaat ttaccccagg aaaaggggag ggaaggcatg 2100 ctgatatgag ttgcctcatg ggacagtgat agccattccc tgccttccca tctccatggt 2160 acagcagatc ttatatcatg ttaacttagt aatatttcca agagagtaga aaaataagta 2220 aggaaatggg gaatctgata ttattctctc tcatctccag agcaacattg gtgctgttgt 2280 aaagatgtac tgtagaaaag tattcttcac ccagcgtgac ccccacagaa ggtgtcaggt 2340 agacttgaaa taagcaaagt aataacccag ctcccatacc catagtggca attgtagatt 2400 tctattgccc caaaagagcc atacataggg atacttacct agaaagacag aggatcttcc 2460 cttggtttgt gaagaggcag ctagtatatt tgtgtgtgtt tgcatagatg caaacggtaa 2520 ataaattcct aggtttatca atacacagtc aaacattaaa atctctcatc ttggctgggc 2580 atggtggctc acgcctgtaa tcccagcact ttgggaggcc gaggcgggcg gatcatgagg 2640 tcaagagatc gagaccgtcc tgggcaacat ggtgaaaccc cgtctctact aaaaatacaa 2700 aaaattagct gggtatggtg gcacacgcct gtagtcccag ctactcggga ggctgaggca 2760 ggaggattgc ttgaacccgg gaggcggagg ttgcagtgag ctgagatggt gccactgcac 2820 tccagcctgg cgatagagca agactccgtc tcaaacaacc aaaccaaaac aaaacaaaat 2880 atctcacctt atctttgaag actaaggaaa aaaaaaatct cccactcatc gatacactcc 2940 acagaggcag catactctcc aagtgtagct ttctcttttc atgttcatta ttcccttggt 3000 gttggttatt ctcaatgtca atcataacag aacatcttcc ataataacag tcccaattta 3060 aggagcatta agataaaagg tggaattgcc aaggtcaatc cagacgagaa ccttctcata 3120 gaggtaacca ccgtgtgggt ttggatgctg ggaagcaggg ggactatgac gctacaaggt 3180 ctcagtctta atttttggag tatttcagtc cccaggtata ttttccatag atttggccct 3240 taaataaaga gaagcttctg actctaaaat gtaaacagtg cttgttacag tcttgttgat 3300 atattaagaa attactcacc ttatctcatt taatcttaaa aacaaacccc tgacaggatc 3360 aaaaccacag cagggctaca taataggaaa actatacata aataggtaga ataatctgct 3420 caggatcact aggtaagttg ctgaataaga attcaagatg tttttgatcc cagagtttaa 3480 aacccaacct ttcaaacagc gtttctttct tcttagagta caatgttctg agaaagagat 3540 cctctggaat tctggcctaa gtgtatttaa tgcccgggta aagaaagtga gagaacattt 3600 ctctttaggg gctgctgctg gatttctaaa aagaaaataa tttctcagct agtaacatgg 3660 agccaaacaa cagcttcaca agactctggg ttctttagcc ctcatctcct tcaatccacc 3720 ctctttataa ccagtccttc ttgtttttcc cctcccagct ttgttcagca gcatgccctt 3780 cacccagacc ttgtcttgtc actcatccct actcgccatc attctttcat tcctcttggc 3840 ccaatctctc tccactactt cctgcctaca tgtatgtagg ttattcattt ccctctcttg 3900 attcccccca cccaactctc tttctccatt tcttgccttt cagaagaaca tgtgatcatc 3960 caggccgagt tctatctgaa tcctgaccaa tcaggcgagt ttatgtttga ctttgatggt 4020 gatgagattt tccatgtgga tatggcaaag aaggagacgg tctggcggct tgaagaattt 4080 ggacgatttg ccagctttga ggctcaaggt gcattggcca acatagctgt ggacaaagcc 4140 aacctggaaa tcatgacaaa gcgctccaac tatactccga tcaccaatgg tacctccctc 4200 tctgctgcac tcctggacat gggaatccat agtttgaaag tagttgcttc agctctttgt 4260 gttagattat tgtaactgat tttccctcca agggtctaac cttgccatta acaagcccca 4320 aattctcatg ccagaggtct gagaacttta tgggtttgat cctatcttgt tgtgctcaag 4380 tcttgtctct gtcatccatg gtctcctacg aagtcattgc cctaagttca tgctggggga 4440 gccagaaggg aagtccttgg atatcttata cctcaatatt ggctcaattt cttggggagg 4500 gggtgctgtc agagattgtt atctgaggat gtgacataga tttctcaggg cacaatttca 4560 actacttttt cagctttagg gtttttagat acgtttgtac cacaattgag catgggaggg 4620 agaggggtga gcctaagcag tgatggctga tttctgtcat gtctgtcatg tgtcccccag 4680 tacctccaga ggtaactgtg ctcacgaaca gccctgtgga actgagagag cccaacgtcc 4740 tcatctgttt catagacaag ttcaccccac cagtggtcaa tgtcacgtgg cttcgaaatg 4800 gaaaacctgt caccacagga gtgtcagaga cagtcttcct gcccagggaa gaccaccttt 4860 tccgcaagtt ccactatctc cccttcctgc cctcaactga ggacgtttac gactgcaggg 4920 tggagcactg gggcttggat gagcctcttc tcaagcactg gggtatggac caacactcaa 4980 tctcctttat ttcaaggttt cctcctatga tgcttgtgtg aaactcggtg ttctaactgt 5040 ttcataatat ctgctacaat taatataact gtcttctcct actatccagc ttcctccttt 5100 ttttaatctg taattctctc aatacatcat tctgtcttcc tcttctttaa tctatgaata 5160 acttttctct ttattaagaa ccctacattt gattctgagt gttacttctt cccacactca 5220 ttaccatgta ctctgcctta tttcccccca gagtttgatg ctccaagccc tctcccagag 5280 actacagaga acgtggtgtg tgccctgggc ctgactgtgg gtctggtggg catcattatt 5340 gggaccatct tcatcatcaa gggattgcgc aaaagcaatg cagcagaacg cagggggcct 5400 ctgtaaggca catggaggtg agttaggtgt ggtcagagga agatgtatat ggagatatct 5460 gagggaggaa aacagggtgg ggaaaggaaa tgtaatgcat ttaagagaca aggtaggaac 5520 agatgtggct cttgatttct ctttgctaga acgaatcaga cattcgtatc atctggtatc 5580 ccaaagcttc agggtctgtc atccctttct atagacgggc accttgatca cggctccagt 5640 cttagaaatc atctccagta cctaaaacca ttgtttcaca ttagaatact gagtctaggg 5700 atctagaaaa tacattagaa tatggagtct agggatctag aaaatactga gtctagggat 5760 ctagaaaaat aagcctcaag atttgggcac atcctagctt gtatttcctg gggcaggtca 5820 tcagttcaga agcatttcca gatcctggct cctttcaggt tagggtcaat tcattgcatg 5880 aaatgggaat ctcttagagg ccaatgcctg cttttgcttc tttagtctca aatgtagtat 5940 gagaaactct aaaaaaaggt aaagcatggt tgcttattat gttcagttgg agagtagggt 6000 atacagttag ttcatgttgg aaaggttaga tgaacattga aagaattttg caaagtcaaa 6060 ggattaagag agaagaggaa ggaatctgaa gcaaggagct caaaactgat cttcaactcc 6120 ttggtaacta tgtgtgtctt gctataggtg atggtgtttc ttagagagaa gatcactgaa 6180 gaaacttctg ctttaatggc tttacaaagc tggcaatatt acaatccttg acctcagtga 6240 aagcagtcat cttcagcatt ttccagccct atagccaccc caagtgtgga tatgcctctt 6300 cgattgctcc gtactctaac atctagctgg cttccctgtc tattgccttt tcctgtatct 6360 attttcctct atttcctatc attttattat caccatgcaa tgcctctgga ataaaacata 6420 caggagtctg tctctgctat ggaatgcccc atggggcatc tcttgtgtac ttattgttta 6480 aggtttcctc aaactgtgat ttttctgaac acaataaact attttgatga tcttgggtgg 6540 aatttttggt gtttaagcca gttctttggg tggcggtggg gggtggggag tcggtcctgg 6600 ggaatatatg tgatcctttc ccggtaaaat atctgaatgt tgaatttatc ttataaattc 6660 tagaattcat cagacatatc ccggttcatt tgggcttggt ctcattttgt gcatctgcag 6720 gcaaccctct tgttgtggtc tagtcctcat caggaaaacc taaagtgggg ttggtttgtt 6780 gggagatctc tactgagcaa tgatataact ctatcttcag tagagtgaat ctgaaacccc 6840 aaggtatgga tctcagaatg catgggatgg aggggagcag atggggttag agtggggaga 6900 aggaagacag aagaatccat aaacattgca ggatttacat atcaacatcg ttcattccag 6960 atttaatgag caaagagatt ggacactgaa gactggcctt acccattctg ttagacatag 7020 tctcagatgc ctattgtatt accgagagag tagtctgact gattcttgaa accaccttat 7080 atttgaagat gtgtctttga gtggaaaagc tgagtgaaat ttggggttgg ggagaaagat 7140 atgacattaa gatgagagga aggaatattt gaaacacgat gaactgttgc tcatttgtct 7200 ataaaactat gacttgatat ttatctctaa aatagtttct agaacctgcc ataaaccact 7260 aagataaact attcatgata gtgtggtaga ctgcaaataa atgctgttga aatgagttag 7320 gcttgggttt catcttggct gtatcattta ctagctatgt tttcactggt atcttactta 7380 acttagcctc acattactca tgaaaatact ggtgttaatt tttactacat tgaattaata 7440 tcagaattaa aaggaaaacg caagcaaagt aattagatac atgcttagtg ataataaaat 7500 attgcaaaaa attatacatt ctgttgtttt tctcaaaatt tctatagagt gatgataaaa 7560 atctaagaga agctaaacaa aacaaggata aaccaaagca tcatgacctt ctaagcctta 7620 ctaataaata agaagtttct cggctgggca cggtggctca cgcctgtaat ccagcacttt 7680 gggaggccga ggtgggcgga tcacaaggtc aggaaatcaa gaccatcctg gccaacatgg 7740 tgaaacccca tctctactaa aaatacaaaa attagccagg cgtggtgata ggcgcctgta 7800 atcccagcta ctctggaggt tgaggcagga gaatctcttg aatccgggag gcagaggttg 7860 cagtgagccg agatcgcacc actgcgctcc tgcctggcaa cagactgaga ctccgtctca 7920 aaaaaaaaaa aaaaaaaaaa agtttctcta ctgttggttc agagaatcaa agcagaatct 7980 tgagactact gacggtagaa taggtatgaa tgtctttctt acatgactac aaactttatt 8040 ataaaataaa tagcttaaca cagagaatac actaaaactt agacaagcat ggattaagaa 8100 agcaaaaagt aaacccatat actaccatgt aagaaaaccg tttttggcca ggcgcggtgg 8160 ctcacgcctg taatcccagc actttgggag gccgaggcgg gcggatcacg aggtcaggag 8220 atcgagacca tcctggctaa catggtgaaa ccccgtctct attaaaaaaa aaaaaacaaa 8280 aaattagccg ggtgtggtgg cgggtgcctg tagtcccagc tactcgagaa gttgaggcag 8340 gaaaatggcg tgaacccagg aggcagagct tgcagtaagc cgagatcgca ccactgcact 8400 ccagcctggg cgacagagcg agactccatc tcaaaaaaaa gaaaaaaaaa aaaaaaaaaa 8460 aaaaggaaaa ccattttaat agacttttat ttttagagct gttttaagct aacagaaaaa 8520 ttgcagaaat tgtatacaga gctcccccac ccccagtttc tacaatgctt aacatcctgt 8580 attaatgtgg tacacttgtt acaattgatg aaccaatact aataattatt attaactaaa 8640 attcatagtt atacgagggt tcactctgta tta 8673 //