Dbfetch
ID OW382066; SV 1; linear; genomic DNA; STD; HUM; 11516 BP. XX AC OW382066; XX PR Project:PRJEB52053; XX DT 05-APR-2022 (Rel. 144, Created) DT 11-APR-2022 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-DPB1 gene for MHC class II antigen, allele DE HLA-DPB1*04:01:01:NEW XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Lucas J., Lucas AM J.; RT ; RL Submitted (01-APR-2022) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, 77C Fleet Road, London, NW3 2QU, United RL Kingdom XX DR MD5; a8eb524ad41091359289f35087ae3ff4. XX FH Key Location/Qualifiers FH FT source 1..11516 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN301038" FT /db_xref="taxon:9606" FT CDS join(367..466,4997..5260,9265..9546,10094..10204, FT 10534..10553) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH2468769.1" FT /translation="MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYLFQGRQECY FT AFNGTQRFLERYIYNREEFARFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVPDR FT MCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQ FT EETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKAQSDSA FT RSKTLTGAGGFVLGLIICGVGIFMHRRSKKVQRGSA" FT exon 367..466 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /number=1 FT intron 467..4996 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /number=1 FT exon 4997..5260 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /number=2 FT intron 5261..9264 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /number=2 FT exon 9265..9546 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /number=3 FT intron 9547..10093 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /number=3 FT exon 10094..10204 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /number=4 FT intron 10205..10533 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /number=4 FT exon 10534..10553 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*04:01:01:NEW" FT /number=5 XX SQ Sequence 11516 BP; 3131 A; 2537 C; 2986 G; 2862 T; 0 other; taatccctgt agatgggcca gcagaatatt tgagatcacc ttcagagcaa agaaaacgca 60 taatctcccc aaacatcatg acttatctga ctggttaaaa tgagtatcac tgtctttcct 120 ccgtcatctt aagtgcatca caggctttat attttcagac ctttcatact aactttctgc 180 ctagtgagca atgactcata caaagctcag tgtccattgg ttcttttctc agactctgtc 240 caatcccagg gtcacagaag actacttggg ttcatggtct ctaatatttc aaacaggagc 300 tccctttagc gagtccttct tttcctgact gcagctcttt tcattttgcc atccttttcc 360 agctccatga tggttctgca ggtttctgcg gccccccgga cagtggctct gacggcgtta 420 ctgatggtgc tgctcacatc tgtggtccag ggcagggcca ctccaggtaa gagccgaact 480 gccattcttg gagggtctgg ctcagggaac aattcctagg ggacgttatc tttaagggat 540 caaattctga gacaggctgc gggggctcct gccctaaggc agtgtcctct cttcccagct 600 agagaaagag gttcatcccc tataggatag cttgctaccc tactggccta ttctctctcc 660 aaggacatgg gtacagtaaa cagagagagg tgcccagtgg tcagtgtctt tggggaaaat 720 gggaccaaga ggtcctggat aaccttggac agacaaggtt tgcagagaga gaagttggca 780 agtgcaggct cctgggcgtg ttcatgtctg catccagcct ggaggggact caggcagaga 840 gccctaagct ggagtgtcca ggctctgagg atcactgagg attcagtgct cacgaagaat 900 gcctcttatt ccccagggtg gagcaggagc ccacatccct tggacaatta aggagagaag 960 ggagggaggg ggataggttt tagcccctga aggcattctc attaaaggta cttctcccag 1020 cctccccaga acttggttag ggtactagag tgggttgcga cttgtaggaa gaatgagatg 1080 aggttgtgtg ggtgcatgac agggattgag tgtaggttat cagacagcca aggaagcagt 1140 aaccaagtga aaaatctctt cttcctgctg cctccctgtg gctggtgtaa tattatggca 1200 tctatgatcc attgtttttc tctcaggata ctctcaggat atttcttttt atatatatat 1260 atactttaag ttctagggta catgtgcaca acgtgcaggt ttgttacata tgtatacatg 1320 tgccatgttg gtgtgctgca cccattaact cgtcatttac attaggtata tttcctaatg 1380 ctatccctcc cccctccccc caccccacaa caggccccgg tgtatgatgt tccccttcct 1440 gtgtccatgt gttctcattg ttcagttccc acctatgagt gagaacatgt ggtctttggt 1500 tttttgtcct tgcaatagtt tgctgtgaat gatgatttcc agcttcctcc atgtccctac 1560 aaaggacatg aactcatcct tttttatggc tgcacagtat tccatggtgt atatgtgtgc 1620 attttcttaa tccagtctat cactgatgga cagttgggtt ggttccaagt ctttgctatt 1680 gtgaatagtg ccgcaataaa catatgtgtg catgtgtctt tatagcagca tgatttataa 1740 tcctttgggt atatatccag taatgggatg gctgggtcaa atggtatttc tagttctaga 1800 tctttgagga attgccacac tgtcttgaga taccatctca caccagttaa aatggcgatc 1860 attaaaaagt caggaaacaa caggtgctgg agaggatgtg gagaaatagg aacactttta 1920 ctctgttggt gggactgtaa actagttcaa ccattgtact ctcaggacat ttctagtcca 1980 aatttacacc aacactctga gaggaaggac tgcaaagtag gtaccttagt tttccactga 2040 cttccacttt tcctgcttac acccttcctc ctagacctct ccacacccct cctaggacac 2100 acctagaagg tactgacatc atgtcacctc ctcatctttc agggtagcaa ggttggaatc 2160 tcctgaatac agcccctcaa gccctaaaac ctcttatcta ttaccttggg ttcattgtcc 2220 aggaagggga ggagaacttg aacttgtagt cacagaaggg tgctgagaac taaccagcag 2280 gacggctcag ccctgggaac tgcagagggg tgaggctggg gagagaggag gctggagcag 2340 cactggtgac actgaacagt gtcaggagga agtgacggat gcagcgcccc catcccatag 2400 gcagagctgt catgtgggat gagggacagt gttgggagcc accaaggaaa cccagaggtg 2460 ggggagcaga gagcagaagg gggcatgtga tgctgggcag tgaaagggag gacgggcaaa 2520 ggctgggttg aggtttgtag ggggaatgag atgaggcagt ggagccatgt gacagggact 2580 gagggtagat tactggagct ccctgcgtag aatgaatgtt caatcaaaac ctgctggagg 2640 gagagctgga gccatagggg agtgggtaaa gtgggcaggg ctgattccac aattccctgc 2700 atgctccccc aactccacac acatccccaa cctcaaacag ggcacaagac caaagggctg 2760 aggagccagg ctatagctta aagaggctgg gggagaaaag cttggctgag acaacccata 2820 gggagctaga ggtttttaat atatcctatt ctgaataaga gacgaattca ttcagatcag 2880 tggtttcaaa ccgtgctctg ggcaactcaa ttgctaaggg ttccacaaac aggataaagt 2940 ttcttatata caaaaaaaaa tgaaggtttc aaattacacc ataaaacccc tcattgctta 3000 tgtctacttg gcaggtaaaa ttccatttca aaagttaaat gtacttaaaa aattacctaa 3060 gactgggtaa attaaaaaaa ttaaatgttg caaagaaaaa attcaaaatt cttattcttg 3120 aatgaaaaac gttctcttac tggtgattga ggaggagaaa caaagactaa caaatgaaaa 3180 tgggagaatc cacactcaga gtggggcaat tgaacaggca ggggcggatg gatggcagag 3240 gaggaggaat ctggactcaa ggagctgggg ggctctgggc ctggaatttt agggtctggg 3300 gcccaaggca ccaggagaag aggcaggtca ggatatctga gtcaagacct gggatcttgc 3360 cttagcaatg acactggaga ctaaaggtgg actccatggt gcccttgagc ccagccctac 3420 cccatctcca ctatcctctg ccaccagctg tgcaacttct gctaggggtg aggttaataa 3480 actggagaag ttaatttgtg gagcatgaaa cagatgagca gaacaatcac agcaccttaa 3540 tttccccagt gtgcccaaga acagagcagg cctgaagata ctcaaacaga aacaaacatg 3600 tgccgtgtca ctgataattc tgtgtagaca cacacctgcc agacactgct catggcactc 3660 cctaggaaga acagcatgtg ggaaaggctg ccaaaattgt tcatgtaaaa attacatcaa 3720 tgctgtcttc ctcggtgctg cctatgcagc tggcagccat ctcttcctcc acatcatggc 3780 ctccctcaga ctcctcatga aggataagat cctcaaaaag aggaccaaca agttcatgag 3840 gcaccaatca gactgaaatg tcaaaattaa gcataactgg cggaaaccca gaggtcttaa 3900 cagtagggtt cgtagaaggt ccaagggcca gatcttgatg cccaacattg cttatgggag 3960 caacaacaac aacaaaaaaa acatgctgcc cagtggcttc cagaagtttc tggtccacag 4020 cctcaaggag ctgaaagtgc tgctgatgtg caacaaatct tactgtgctg agatcgctca 4080 caaaatttcc tccagaactg caaagtcatc atggaaagag tcacccagcc ggccatcaga 4140 gtcaccaacc ccagtaccag ggtgcacagc taagaaaatg agtagaaagt tcatgtccac 4200 gttttgtgtg taaataaaac cataaaaact gccaaaaaaa attacatcaa tgcctctaaa 4260 cccaaaggac tctaccccca caggtccctg gttgttgtgg tgattttcat tgtgtaaaat 4320 actttccaca tcttttgaca ccaagtcttt ctgcagccat gtttgaaaat taactttcag 4380 gctacagagt ctttcttata ccaaagttga agaaagtttt aagaaatata tttctacatc 4440 tcctacatgc aaaacaacag gagcaagttg aggaattctc aagaaactgg tcgagaagag 4500 agagcgctta gctatggaaa agagaaagaa ggaagggagg gcttcctgga ggaggtggca 4560 tttgaaccag gactgacatc aggatggaaa tgtcagtcag ggagttaagt agggggagca 4620 gctccgccct ccacgtcccc agctcctccc gcccctgttt tttctcccag tgaccccacg 4680 tgaaacgtct ccgcctcctc cagccaccag cagaagggac tgccttcccc tcagtgctcg 4740 cccctcccta gtgatcactc agtgcccctg agctcattct tttcagtaaa ttctctctct 4800 gcgtggtgag aaaacaggcc tggagaggct ctgcgacccg cttaggacca cagaactcgg 4860 tactaggaaa actcctattt taaaatccag ccctgggtgg gaagatttgg gaagaatcgt 4920 taatattgag agagagaggg agaaagagga ttagatgaga gtggcgcctc cgctcatgtc 4980 cgccccctcc ccgcagagaa ttaccttttc cagggacggc aggaatgcta cgcgtttaat 5040 gggacacagc gcttcctgga gagatacatc tacaaccggg aggagttcgc gcgcttcgac 5100 agcgacgtgg gggagttccg ggcggtgacg gagctggggc ggcctgctgc ggagtactgg 5160 aacagccaga aggacatcct ggaggagaag cgggcagtgc cggacaggat gtgcagacac 5220 aactacgagc tgggcgggcc catgaccctg cagcgccgag gtgagtgagg gctttgggcc 5280 ggcggtccca gggcagcccc gcgggcccgt gcccagggcg caggagcagc cgggttggcc 5340 taagggacct tagtgccggg cggaaagggg actttgggtt ggggattcat ggggggagcc 5400 catctggagc ttgtcagggg agcgagcgcg gggacctgga ctgggctgag catggagtga 5460 ggaggacgag agcagagacc cccgggactt catcaggcct ggcagctgac tgcatgtggg 5520 gtgaaaaaag gaagccacag gacagcgcac aagggtatgg tgtggagatg gaggtggaga 5580 tggcacagca ggccacacag agaagaaacc tacagggagg tagctgggtt tgaggtgctt 5640 gaggggcaga tgggtggtct gatgggcagg tagacagaag ggtctgcagc cggggaggag 5700 actgagatac atgagaccat ccagggagag gggacccagg gggaagagca aaggaccgga 5760 tcctgggaac tggacagttg tgatttggcc aagacagaaa agcctgtgaa agagaccaaa 5820 aaaacccaag tgcagtgtga ggagaggccc gcagagaaga gtcttggaag ctgaggggag 5880 gtgacctcag cagcacagtg gacagcggtg ccagtgactt gggaaggtca gaaaacagaa 5940 gatggaaagt gggtttggaa accagggaga cctggggaga gcaggttggc cgcagcggca 6000 ggagctggaa tgggaggggg tgcatgaggc tgagtgtggc gcatcctcct cggggctgag 6060 atggatttta cttgtcttgg gttccccacg gctgtcacag ggcagtgtct cagttcattc 6120 gtctttttcc ttcaggaagt ctgggtgtaa agggatggag agaggtgagg tgtgtgcagt 6180 aagaggattt ctcaaggatg ggacaggaag gccttggagc tttggcttcc tcctgtgaac 6240 ttgtggggtg gggagcctgg tgcaccaacc tgagggactt gagggagtag tatcaggatg 6300 tgggattgag ccctggacct tttttctaga aagaggaaaa aaatgaaggg aggaggagga 6360 ggaagctggg gagatcacac ctttgatttt cttgttcctg gaaagtgaaa ggaagttcac 6420 ctgctatgag tgagaaggtg gacacactgg gtggggatga ggtgagtgac atgagcttag 6480 gaaagttgct gaggtaattg gttgagagag gtgttcaaat aaaaataacg caattggcaa 6540 aaactgttac taagactttg tagaggcacc aatcagtgac atggcagcat tttctttcac 6600 agtaatcaac tgccagattg cagacagccc tgatgccagc ctaaggagtg tgggtttctc 6660 ctccaggccc gcaggtcccc aacctcactc ctctgaagac tcttctggag atcctctgtg 6720 atgcacagat ctccagactc agtgccccca gactcagatt ccctgggtgg ggaggtctgg 6780 ggatctctgc ttgtaatcag ctccctagag gttcccatgt agccagataa gtattgtcag 6840 aacactgaag atttttgaaa aatgaaaaag agaaggttgg agatgtgtct tcagaagact 6900 actaagggtg ctggctagag gagggaccag aggcagggag atgaggtagg aaactgctat 6960 tatttgtcag ggaaattgca atcaaggcat gagttagaac agggaaaaca cagaggcaag 7020 ggagaggtgg aagggggagg aaagaagtag tgacaattcc agggtggatg tccacccaaa 7080 tctagaagta attgagcaaa tgttttctgg gcattagaga aggcaactag aacaaacagg 7140 aatccttgcc ttggtgaaat gtatttgaac tgggtcagaa atgaggccat tgggtatcag 7200 gccttaactc cagcgcaccc tggaggtcac tgatgtggct ccaggctgac ctgctcctgt 7260 caaagaatat tgagcaagat gcctctcgtg gaatgttctg ggaccttaaa acagataccc 7320 aagtattccc cctgatttca tggttcccag aagctctatg gggaagaaat tgtaggtaat 7380 tcacaactga gatttagaca taagttgaat agtgtaatgg acattgagtt aaccgaggta 7440 atgaagtagt gagacacagg tgcccctgaa ataaactcac attgagggaa gaggctgaca 7500 atgtggatca gtctgaaaac aaggcaaaaa tacaataggg agtaagggtt gtgtgtcagt 7560 tcaagactgt acttttacct ggcccagcgc catgttaggg tatttgtgtt ctccaggaag 7620 tagaaaggaa agaactgagt gattagggac ctagaagact aatttgagac attcctcttg 7680 atgagctgtt ctctagggta gtcctctgaa agagctgttc tctagtggat ctccctgaat 7740 gaactgttct ctaggagcac ttgacccttt tctgtgtttg ttttttgttt tgtgtttgtg 7800 tttgtttttg agacaggttc tcactttgtc tcccaggctg gagtgctgtg gcaccatcat 7860 ggctcactgc agcctcaacc tcctgggctc aagtgatcct cctgcctcag cctcccatgt 7920 agctagaact acagatacac gtaccaccat gtctggctaa tttatttttc tttttagaga 7980 tgggttctca ctatgttgcc caggccggtc tcaaaaccct gggctcaagt gatcctcatg 8040 cctcaacctc ccaaagtgct aagattatag gcatgaccac catgcctggc cttttctgct 8100 ttctgaggag gaaaaaggta ctggtggcag agatccaaaa gaaaagttgc cagtggcagt 8160 gtggaaattc acctgagaac aacaggacaa gctggggcac aaatgcaaag atgcagaggg 8220 aggcaacacc tggtcatctg tgagaccttc atgggacctg aagacgcagc acagaggagg 8280 aacttgaaaa aggacgggat ttctactact caagcatgta ggagctcagg atattctgta 8340 aatatgaaga ttttgagttt ttgtaggtga ggtaaaaaaa tacataggtt ttttacagaa 8400 taagacatgt aaagctctct tcattttctt tgtattttca tgaagttatt agattcacag 8460 gccaccataa tgccattgtc tgtatatctt aatttcaaga tattatttga gtaaattttg 8520 cttcctttgt atcaagatag aactttgaaa aggtaggtaa tttcacagtt gatcaaatat 8580 tctttgccca aattactttt ggttaaaatt tctcctaaat gtgctacaga gtgcaaactc 8640 tgtctccctg ccattccgct atatacttac taactattat tttattcaag atcatgcatg 8700 ctctacttga aggtctattt ctatcttttc aatgctaccc ttacccacta gcctaatcac 8760 attattccta ttttcaacat ctaggaatca attacatagt gaacatgcct aagaaataat 8820 aatctgggca gatgcagtgg ctcaggcccg taatcccagc cctttgagag gccgagcggg 8880 tggatcactt gaggtcaggc gttggtcaag tgctcctaga gaaccaggct gaccaacatg 8940 gagaaacctt gtctctacta ataatacaaa aattagccag gtgaagtggc aggcacctat 9000 aatcccagct attcgggagg ctgaggaagg agaattggtt gaagcccgga ggtggaggtt 9060 gcagtgagcc aatattgcgc cactgcattc cagacttggc aacagagtga cactccatct 9120 caacaaaaag aaagaatgaa agaaagaaag agcgagatta tgtctcaaaa aaaaggaagg 9180 aaggaaggaa ggaaggaagg aaggaaggaa ggaaagaagg acaatctcaa attctatttc 9240 attatttttc ttccacgctc ctagtccagc ctagggtgaa tgtttccccc tccaagaagg 9300 ggcccttgca gcaccacaac ctgcttgtct gccacgtgac ggatttctac ccaggcagca 9360 ttcaagtccg atggttcctg aatggacagg aggaaacagc tggggtcgtg tccaccaacc 9420 tgatccgtaa tggagactgg accttccaga tcctggtgat gctggaaatg accccccagc 9480 agggagatgt ctacacctgc caagtggagc acaccagcct ggatagtcct gtcaccgtgg 9540 agtggagtga gtctctgatg accctctaga ccccacctct gaagagcagg ggactctctg 9600 gctctggggt ccactcatct tatcttctgc atctataccc tggggccatg tccaaacccc 9660 atctttcttc tataccagct cctgagcata gtttgaagcc agggaaatgg agacttcctg 9720 accttggctt aggggttcct gaagattcat agttctcccc cttgtcagag aatctaggga 9780 cactgactgg tctcgaaacc ctcacactta ggaactgacc tcacacatag gaacagttct 9840 cttccttcag cattttagcc tcttctcagg cattttgaga ggcaacttcc agaatcagca 9900 tttgccacct tgttgaggtc acacccctgt tccagatatg agggtggctc tttctgaatt 9960 tcctcttagc aagctttttc cgctgcactg tcctcatccc gatatgctgc atcaggctcc 10020 agaatctcag acaggacatg agtagggatg cagctggtgg aggtgacact aaacctgggt 10080 ctgtccttcc cagaggcaca gtctgattct gcccggagta agacattgac gggagctggg 10140 ggcttcgtgc tggggctcat catctgtgga gtgggcatct tcatgcacag gaggagcaag 10200 aaaggtgaga aagcctgcag ggtgagcggg acttaccttc ccctggcata ttcacactta 10260 ttccacgatg aggggtttga cagaaaagaa atgtcagaaa gctctagagg ccactgatat 10320 cagataatcg gggaacaaac atgacctata gcgagagagg gatcccaggc tgggatctta 10380 atgcagccag atgcatgagg tcccaagtac tcaggctcct gcggagcgtc cattgagtga 10440 tgggcaatgg aatttggtgg gatggaaatg tttctctaat tatctgaggt ggtttcaatg 10500 gctgattata taacctttcg tctttcattt cagttcaacg aggatctgca taaacaggta 10560 atattcctgc tttgatttcc ttgtggggtg ggttgcagga ggatatgagt cctttctgtg 10620 cattgtaaca ctgaggctcc tccaggaagg gaatctcagg catgaacccc tctttcaatg 10680 tcagccttca ggcaagtggg gaaagagcat tgcttggctc cattgctgaa ggaagcagag 10740 atcaactctg ttatttatca gcctgagacg catcctctca ccataatttt tctctcctgg 10800 acttacagga aggaggctgg caacctggga taacttgtct tttaccccca cagggttcct 10860 gagctcactg aaaagactat tgtgccttag gaaaagcatt tgctgtgttt cgttagcatc 10920 tggctccagg acagaccttc aacttccaaa ttggatactg ctgccaagaa gttgctctga 10980 agtcagtttc tatcattctg ctctttgatt caaagcactg tttctctcac tgggcctcca 11040 accatgttcc cttcttctta gcaccacaaa taatcaaaac ccaacatgac tgtttgtttt 11100 cctttaaaaa tatgcaccaa atcatctctc atcacttttc tctgagggtt ttagtagaca 11160 gtaggagtta ataaagaagt tcattttggt ttaaacatag gaaagaagag aaccatgaaa 11220 atggggatat gttaactatt gtataatggg gcctgttaca catgacactc ttctgaattg 11280 actgtatttc agtgagctgc ccccaaatca agtttagtgc cctcatccat ttatgtctca 11340 gaccactatt cttaactatt caatggtgag cagactgcaa atctgcctga taggacccat 11400 attcccacag cactaattca acatatacct tactgagagc atgttttatc attaccatta 11460 agaagttaaa tgaacatcag aatttaaaat cataaatata atctaataca ctttaa 11516 //