Dbfetch
ID OW382051; SV 1; linear; genomic DNA; STD; HUM; 11475 BP. XX AC OW382051; XX PR Project:PRJEB52053; XX DT 05-APR-2022 (Rel. 144, Created) DT 11-APR-2022 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-DPB1 gene for MHC class II antigen, allele DE HLA-DPB1*15:01:01:NEW XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Lucas J., Lucas AM J.; RT ; RL Submitted (01-APR-2022) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, 77C Fleet Road, London, NW3 2QU, United RL Kingdom XX DR MD5; 3701c0f954b31caebf56d91e8f80b03c. XX FH Key Location/Qualifiers FH FT source 1..11475 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN301010" FT /db_xref="taxon:9606" FT CDS join(367..466,5009..5272,9224..9505,10053..10163, FT 10493..10512) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH2468754.1" FT /translation="MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYVYQGRQECY FT AFNGTQRFLERYIYNRQEYARFDSDVGEFRAVTELGRPAAEYWNSQKDLLEERRAVPDR FT MCRHNYELVGPMTLQRRVQPKVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQ FT EETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYICQVEHTSLDSPVTVEWKAQSDSA FT RSKTLTGAGGFVLGLIICGVGTFMHRRSKKVQRGSA" FT exon 367..466 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /number=1 FT intron 467..5008 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /number=1 FT exon 5009..5272 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /number=2 FT intron 5273..9223 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /number=2 FT exon 9224..9505 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /number=3 FT intron 9506..10052 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /number=3 FT exon 10053..10163 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /number=4 FT intron 10164..10492 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /number=4 FT exon 10493..10512 FT /gene="HLA-DPB1" FT /allele="HLA-DPB1*15:01:01:NEW" FT /number=5 XX SQ Sequence 11475 BP; 3105 A; 2538 C; 2977 G; 2855 T; 0 other; taatccctgt agatgggcca gcagaatatt tgagatcacc ttcagagcaa agaaaacgca 60 taatctcgcc aaacatcatg acttatctga ctggttaaaa tgagtatcac tgtctttcct 120 ccgtcatctt aagtgcatca caggctttat attttcagac ctttcatact aactttctgc 180 ctagtgagca atgactcata caaagctcag tgtccattgg ttcttttctc agactctgtc 240 caatcccagg gtcacagaag actacttggg ttcatggtct ctaatatttc aaacaggagc 300 tccctttagc gagtccttct tttcctgact gcagctcttt tcattttgcc atccttttcc 360 agctccatga tggttctgca ggtttctgcg gccccccgga cagtggctct gacggcgtta 420 ctgatggtgc tgctcacatc tgtggtccag ggcagggcca ctccaggtaa gagccgaact 480 gccattcttg gagggtctgg ctcagggaac aattcctagg ggacgttatc tttaagggat 540 caaattctga gacaggctgc gggggctcct gccctaaggc agtgtcctct cttcccagct 600 agagaaagag gttcatcccc tataggatag cttgctaccc tactggccta ttctctctcc 660 aaggacatgg gtacagtaaa cagagagagg tgcccagtgg tcagtatgct tgtctttggg 720 gaaaatggga ccaagaggtc ctggataacc ttggacagac aaggtttgca gagagagaag 780 ttggcaagtg caggctcctg ggcgtgttca tgtctgcatc cagcctggag gggactcagg 840 cagagagccc taagctggag tgtccaggct ctgaggatca ctgaggattc agtgctcacg 900 aagaatgcct cttattcccc agggtggagc aggagcccac atcccttgga caattaagga 960 gagaagggag ggagggggat aggttttagc ccctgaaggc attctcatta aaggtacttc 1020 tcccagcctc cccagaactt ggttagggta ctagagtggg ttgcgacttg taggaagaat 1080 gagatgaggt tgtgtgggtg catgacaggg attgagtgta ggttatcaga cagccaagga 1140 agcagtaacc aagtgaaaaa tctcttcttc ctgctgcctc cctgtggctg gtgtaatatt 1200 atggcatcta tgatccattg tttttctctc aggatactct caggatattt ctttttatat 1260 atatatatac tttaagttct agggtacatg tgcacaacgt gcaggtttgt tacatatgta 1320 tacatgtgcc atgttggtgt gctgcaccca ttaactcgtc atttacatta ggtatatttc 1380 ctaatgctat ccctcccccc tccccccacc ccacaacagg ccccggtgta tgatgttccc 1440 cttcctgtgt ccatgtgttc tcattgttca gttcccacct atgagtgaga acatgtggtc 1500 tttggttttt tgtccttgca atagtttgct gtgaatgatg gtttccagct tcctccatgt 1560 ccctacaaag gacatgaact catccttttt tatggctgca cagtattcca tggtgtatat 1620 gtgtgcattt tcttaatcca gtctatcact gatggacagt tgggttggtt ccaagtcttt 1680 gctattgtga atagtgccgc tataaacata tgtgtgcatg tgtctttata gcagcatgat 1740 ttataatcct ttgggtatat acccagtaat gggatggctg ggtcaaatgg tatttctagt 1800 tctagatcct tgaggaattg ccacactgtc ttgagatacc atctcacacc agttaaaatg 1860 gcgatcatta aaaagtcagg aaacaacagg tgctggagag gatgtggaga aataggaaca 1920 cttttactct gttggtggga ctgtaaacta gttcaaccat tgtactctca ggacatttct 1980 agtccaaatt tacaccaaca ctctgagagg aaggactgca aagtaggtac cttagttttc 2040 cactgacttc cacttttcct gcttacaccc ttcctcctag acctctccac acccctccta 2100 ggacacacct aaaaggtact gacatcatgt cacctcctca tctttcaggg tagcaaggtt 2160 ggaatctcct gaatacagcc cctcaagccc taaaacctct tatctattac cttgggttca 2220 ttgtccagga aggggaggag aacttgaact tgtagtcaca gaagggtgct gagaactaac 2280 cagcaggacg gctcagccct gggaactgca gaggggtgag gctggggaga gaggaggctg 2340 gagcagcact ggtgacactg aacagtgtca ggaggaagtg acggatgcag cgcccccatc 2400 ccataggcag agctgtcatg tgggatgagg gacagtgttg ggagccacca aggaaaccca 2460 gaggtggggg agcagagagc agaagggggc atgtgatgct gggcagtgaa agggaggacg 2520 ggcaaaggct gggttgaggt ttgtaggggg aatgagatga ggcagtggag ccatgtgaca 2580 gggactgagg gtagattact ggagctccct gcgtagaatg aatgttcaat caaaacctgc 2640 tggagggaga gctggagcca taggggagtg ggtaaagtgg gcagggctga ttccacaatt 2700 ccctgcatgc tcccccaact ccacacacat ccccaacctc aaacagggca caagaccaaa 2760 gggctgagga gccaggctat agcttaaaga ggctggggga gaaaagcttg gctgagacaa 2820 cccataggga gctagaggtt tttaatatat cctattctga ataagagacg aattcattca 2880 gatcagtggt ttcaaaccgt gctctgggca actcaattgc taagggttcc acaaacagga 2940 taaagtttct tatatacaaa aaaaatgaag gtttcaaatt acaccataaa acccctcatt 3000 gcttatgtct acttggcagg taaaattcca tttcaaaagt taaatgtact taaaaaatta 3060 cctaagactg ggtaaattaa aaaaattaaa tgttgcaaag aaaaaattca aaattcttat 3120 tcttgaatga aaaacgttct cttactggtg attgaggagg agaaacaaag actaacaaat 3180 gaaaatggga gaatccacac tcagagtggg gcaattgaac aggcaggggc ggatggatgg 3240 cagaggagga ggaatctgga ctcaaggagc tggggggctc tgggcctgga atttcagggt 3300 ctggggccca aggcaccagg agaagaggca ggtcaggata tctgagtcaa gacctgggat 3360 cttgccttag caatgacact ggagactaaa ggtggactcc atggtgccct tgagcccagc 3420 cctaccccat ctccactatc ctctgccacc agctgtgcaa cttctgctag gggtgaggtt 3480 aataaactgg agaagttaat ttgtggagca tgaaacagat gagcagaaca atcacagcac 3540 cttaatttcc ccagtgtgcc caagaacaga gcaggcctga agacactcaa acagaaacaa 3600 acatgtgccg tgtcactgat aattctgtgt agacacacac ctgccagaca ctgctcatgg 3660 cactccctag gaagaacagc atgtgggaaa ggctgccaaa attgttcatg taaaaattac 3720 atcaatgctg tcttcctcgg tgctgcctat gcagctggca gccatctctt cctccacatc 3780 atggcctccc tcagactcct catgaaggat aagatcctca aaaagaggac caacaagttc 3840 atgaggcacc aatcagactg aaatgtcaaa attaagcata actggcggaa acccagaggt 3900 cttaacagta gggttcgtag aaggtccaag ggccagatct tgatgcccaa cattgcttat 3960 gggagcaaca acaacaacaa aaaacacatg ctgcccagtg gcttccagaa gtttctggtc 4020 cacagcctca aggagctgaa agtgctgctg atgtgcaaca aatcttactg tgctgagatc 4080 gctcacaaaa tttcctccag aactgcaaag tcatcatgga aagagtcacc cagccggcca 4140 tcagagtcac caaccccagt accagggtgc acagctaaga aaatgagtag aaagttcatg 4200 tccacgtttt gtgtgtaaat aaaaccataa aaactgccaa aaaaaattac atcaatgcct 4260 ctaaacccaa aggactctac ccccacaggt ccctggttgt tgtggtgatt ttcattgtgt 4320 aaaatacttc ccacatcttt tgacaccaag tctttctgca gccatgtttg aaaattaact 4380 ttcaggctac agagtctttc ttataccaaa gttgaagaaa gttttaagaa atatatttct 4440 acatttccta aatgcaaaac aacaggagca agttgaggaa ttctcaagaa actggtcgag 4500 aagagagagc gcttagctat ggaaaagaga gagaaggaag ggagggcttc ctggaggagg 4560 tggcatttga accaggactg acatcaggat ggaaatgtca gtcagggagt taagtagggg 4620 gagcagctcc gccctccacg tccccagctc ctcccgcccc tgttttttct cccagtgacc 4680 ccaagtgaaa cgtctccgcc tcctccagcc accagcagaa gggactgcct tcccctcagt 4740 gctcgccact cctagtgatc actcagtgcc cctgagcagt gagtctcatt cttttcagta 4800 aattctctct ctgcgtggtg agaaaacagg cctggagagg ctctgcgacc cgcttaggac 4860 cacagaactc gatactagga aaactcctat tttaaaatct agccctgagt gggaagattt 4920 gggaagaatc gttaatattg agagagagag ggagaaagag gattagatga gagtggcgcc 4980 tccgctcatg tccgccccct ccccgcagag aattacgtgt accagggacg gcaggaatgc 5040 tacgcgttta atgggacaca gcgcttcctg gagagataca tctacaaccg gcaggagtac 5100 gcgcgcttcg acagcgacgt gggagagttc cgggcggtga cggagctggg gcggcctgct 5160 gcggagtact ggaacagcca gaaggacctc ctggaggaga ggcgggcagt gccggacagg 5220 atgtgcagac acaactacga gctggtcggg cccatgaccc tgcagcgccg aggtgagtga 5280 gggctttggg ccggcggtcc cagggcagcc ccgtgggccc gtgcccaggg cgcaggagca 5340 gccgggttgg cctaagggac cttagtgcca agcggaaagg ggactttggg ttggggattc 5400 attgtgggga gcccatctgg agcttgtcag gggagcgagc gcggggacct ggactgggct 5460 gagcatggag tgaggaggac gggagcagag agacccccgg gacttcatca ggcctggcag 5520 ctgactgcat gtggggtgag aaaaggaggc cacaggacag cgcgcaaggg tgtggtgtgg 5580 agatggaggt ggagatggca cagcaggcca cacagagaag aaacctgcag ggagatagct 5640 gggtttgagg tgcttgaggg gcagatgggt ggtctgatgg gcaggtagac agaagggtct 5700 gcagccgggg aggagactgg gatacatgag accatccagg gagagaggac ccagggggaa 5760 gagcaaagga ctggatcctg ggaactggac agttgtgatt tggccaagac agaaaagcct 5820 gtgaaagaga ccaataaaac ccaagtgcag tgtgaggaga ggcccgcaga gaagagtctt 5880 ggaagctgag gggaggtgac ctcagcagca cagtggacag cggtgccagt gacttgggaa 5940 ggtcagaaaa cagaagatgg aaagtgggtt tggaaaccag ggagacctgg ggagagcagg 6000 ttggccgcag cggcaggagc tggaatggga gggggtgcat gaggctgagt gtggcgcatc 6060 ctcctcgggg ctgagatgga ttttacttgt cttgggttcc ccacggctgg cacagggcag 6120 tgtctgagtt cattcatctt tttccttcag gaagtctggg tgtaaaggga tggagagagg 6180 tgaggtgtgt gcagtaagag gatttctcaa ggatgggaca ggaaggcctt ggagctttgg 6240 cttcctcctg tgaacttgtg gggtggggag cctggtgcac caacctgagg gacctgaggg 6300 agtagtatca ggatgtggga ttgagccctg gacctttttt ctagaaagag gaaaaaaatg 6360 aagggaggag gaggaggaag ctggggagat cacacctttg attttcttgt tcctggaaag 6420 tgaaaggaag ttcacctgct aggagtgaga aggtggacac acagggtggg gatgaggtga 6480 gtgacatgag cttaggaaag ttgctgaggt aattggttga gagaggtgtt caaataaaag 6540 taatgcaatt ggcaaaaact gttactaaga ctttgtagag gcacaaatca gtgacatggc 6600 agcatcttct ttcacagtaa tcaactgcca gattgcaggg agccctgata ccagcctaag 6660 gagtgtgagt ttctcctcta ggcccacagg tccccaacct cactcctccg aagactctcc 6720 tggagatcat ctgtgatgtg cagataccca gactcactgc cccgagactc agattccctg 6780 ggtagggagg tcgggggatc tctgcttgta atcagctccc tagaggttcc catgtagccg 6840 gataagtatt gtcagaacac tgaagatttt tgaaaaatga aaaagagaag gttggagatg 6900 tgtcttcaga agactactaa gggtgctggg tagaggaggg accagaggca gggagatgag 6960 gtaggaaact gctattattt gtcagggaaa ttgcaatcaa gaaatgagtt agaacaggga 7020 aaacacagag gcaggggaga ggtggaaggg ggaggaaagg agtagtgaca attccagggt 7080 gtatgctcac ccaaatctag aagtaattga gcaaatgttt tctgggcatt agagaaggca 7140 actagaacaa acaggaatcc ttgccttggt gaaatgtatt tgaactgggt cagaaatgag 7200 gccattgggt atcaagcctt aactccagcg ccccctggag gtcgctgatg tggctccagg 7260 ctgacctgct cctgtcaaag aatattgagc aagatgcctc tcatggaatg ttctgggacc 7320 ttaaaacaga tacccaagta ttccccctga tttcatggtt cccagaagct ctatggggaa 7380 gaaattgtac gtaattcaca actgagattt agacataagt tgaatagtgt aatggacgtt 7440 gagttaaccg aggtaatgaa gtagtgagac acaggtgccc ctgaaataaa ctcacattga 7500 gggaagaggc tgacaatgtg gatcagtctg taaacaaggc aaaaatacaa tagggagtaa 7560 gggttgtgtg tcagttcaag actgtacttt tacctggccc agcgccatgt tggggtattt 7620 gtgttctcca ggaagtagaa aggaaagaac tgagtgatta gggacctaga agactaattt 7680 gagacattcc tcttgatgaa ctgttctcta gggtagtcct ctgaaagagc tgttctctag 7740 tggatctccc tgaatgaact gttctctagg agcacttgac ccttttctgt gtttgttttt 7800 tgttttgtgt ttgtgtttgt ttttgagaca ggttctcgct ctgtctccca ggctggagtg 7860 ctgtggcgcc atcatgactc actgcagcct caacctcctg ggctcaagtg atcctcctgc 7920 ctcagcctcc catgtagcta gaactacaga tacatgtacc accatgtctg gctaatttat 7980 ttttcttttt agagatgggt tctcactatg ttgcccaggc tggtctcgaa accctgggct 8040 caagtgatcc tcacgcctca gcctcccaaa gtgctaagat tataggcatg accaccatgc 8100 ctggcctttt ctgccttccg agaaggaaaa aggtactggt ggcagagatc caaaagaaaa 8160 gttgccagtg gcagtgtgga aattgacctg agaacaacag aacaagctgg ggcacaaatg 8220 caaagatgca gagggaggca acatctggtt atctgtgaga ccttcatggg acctgaagac 8280 acatcctttt ggaaaaggat gggatttcta ctactcaagc atgtaggggc tcaggatatt 8340 atgtaaatat gaagattttg agtttttgta agtgaggtaa aaaaaatacc taggttattt 8400 acagaataag acatgtcaag ctctcttcat tttctttgta ttttcatgaa ataaaggtat 8460 tagattaaca ggccaccata atgccattgt ctgtatatct taatttcaag atattatttg 8520 agtaattttt gcatcctttg tatcaagata gaactttgaa aagacaggta atttcacagt 8580 tgattaaata ttctttgccc aaattacttt tggttaaaat ttctcctata tgtgctacag 8640 agtgcaaact ctgtctccct gccattccgc tatatactta ctaattatta ttttattcaa 8700 gatcatgcat gctctacttg aaggtctatc ttttcagtgc tacccttacc cactagccta 8760 atcacattat atctattttc aacatctagg aatcaattac gtagtgaaca tgcctaagaa 8820 ataataatct gggcagatgc agtggctcag gcctgtaatc ccagcacttt gagaggctga 8880 gcgggtggat cacttgaggt caggagttgg tcaagtgctc ctagagaacc aggctgacca 8940 acatggagaa accttgtctc tactgataat acaaaaatta gccaggtgag gtggcaggca 9000 cctataatcc cagctattcg ggaggctgag gaaggagaat tgcttgaacc cctgaggtgg 9060 aggttgcagt gagccaatat tgcgccactg cattccagac ttggcaacag agcgacactc 9120 cacctcaaca aaaagaaaga aagagcgaga ttacgtctca aaaaaggaag gaaggaagga 9180 caatctcaaa tgctatttca ttattttcct tccccactcg tagtccagcc taaggtgaac 9240 gtttccccct ccaagaaggg gcccctgcag caccacaacc tgcttgtctg ccacgtgaca 9300 gatttctacc caggcagcat tcaagtccga tggttcctga atggacagga ggaaacagct 9360 ggggtcgtgt ccaccaacct gatccgtaat ggagactgga ccttccagat cctggtgatg 9420 ctggaaatga ccccccagca gggagacgtc tacatctgcc aagtggagca caccagcctg 9480 gacagtcctg tcactgtgga gtggagtgag tctctgatga ccgtctagac cccacctctg 9540 aagagcaggg gactctctgg ctctggggtc cactcatctt atcttctgca tctataccct 9600 ggggccatgt ccaaacccca tctttcttct ataccagctc ctgagcatag tttgaagcca 9660 gggcaatgga gacttcctga ccttggctta ggggttcctg aagattcata gttctccccc 9720 ttgtcagaga atctagggac actggctgat ctcgaaaccc tcacacacag gaactgacct 9780 cacacatagg aacagttctc ttctttcagc attttagcct cttctcaggc attttgagag 9840 gcaacttcta gaatcagcat ttgccacctt gttgaggtca cacccctgtt ccggacatga 9900 gggtggctct ttctgaattt cctcttagca agctttttcc cctgcactgt cttcatcccg 9960 atattctgca tcacgctcca gaatctcaga caggacatga gtagggatgc agctggtgga 10020 ggtgacacta aacctgggtc tgtccttccc agaggcacag tctgattctg cccggagtaa 10080 gacattgacg ggagctgggg gcttcgtgct ggggctcatc atctgtggag tgggcacctt 10140 catgcacagg aggagcaaga aaggtgagaa agcctgcaag gtgagcggga cttaccttcc 10200 cctggcatat tcacacttac tccatgatga gggttcagac agaaaagaaa tgtcagaaag 10260 ctctagagac cactgaaatc agatagtcgg ggaacaaaca tgacctatgg cgagaggggg 10320 atcccaggct gggatcttaa tgcagccaga tgcatgaggt cccaggtgct cagactcctg 10380 cggggcatcc attgagtggt ggtcaatgga atttggtggg atggaaatgt ttctctaact 10440 atctgaggtg gtttcaatgg ctgaatacat aacctttcct ctttcatttc agttcaacga 10500 ggatctgcat aaacaggtaa tattcctgct ttgatttcct tggggggtgg gttacaggag 10560 gatatgactc ttttctgtgc attgtaatac tgaggctcct ccaggaaggg aatctcaggc 10620 atgaacccct ctttcaacct cagctctcgg gtgagtgggg aaaaagcatt gcacggctcc 10680 attgctgaag gaagcagaga tcagttctgt tctttatcag cctaagatgc agcctctcac 10740 cataattttt ctctcctgga cttaaaggaa ggaggccagc aacctgggat aacttgtcct 10800 ttacccccac agggttcctg acctcaccga aaagactaat gtgccttaga acaagcattt 10860 gctgtgtttt gttagcacct ggttccagga cagaccctca gcttcccaag aggatactgc 10920 tgccaagaag ttgctctgaa gtcagtttct atcgttctgc tctttgattc aaagcactgt 10980 ttctctcact gggcctccaa ccatgttccc ttcttcttag caccacaaat aatcaaaacc 11040 caacataagt gtttgttttc ctttaaaaat atgcatcaaa tcgtctctca ttacttttct 11100 ctgagggttt tagtaaacag taggagttaa taaagaagtt cattttggtt tacacgtagg 11160 aaagaagaga agcatgaaag tggagatatg ttaactattg tataatgtgg cctgttatac 11220 atgacactct tctgaattga ctgtatttca gtgagctgcc cccaaatcaa gtttagtgcc 11280 ctcatccatt tatgtctcag accgctattc ttaactattc aatggtgagc agactgcaaa 11340 tctgcctgat aggacccgta ttcccacagc actaattcaa catatatctt actgagagca 11400 tgttttatca ttaccattaa gaagttaaat gaacatcaga atttaaaatc ataaatataa 11460 tctaatacac tttaa 11475 //