Dbfetch
ID OW333167; SV 1; linear; genomic DNA; STD; HUM; 5891 BP. XX AC OW333167; XX PR Project:PRJEB51949; XX DT 14-MAR-2023 (Rel. 144, Created) DT 15-MAR-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-DMB gene for MHC class II antigen, cell line DE DKMS-LSL_ID19880625_DMB_1, allele HLA-DMB*01:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (29-MAR-2022) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; 0e2282d6ba7fbfc7bbb570602ffcb4e0. XX FH Key Location/Qualifiers FH FT source 1..5891 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID19880625_DMB_1" FT /db_xref="taxon:9606" FT exon 1..63 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=1 FT CDS join(9..63,1851..2132,3360..3644,5164..5280,5439..5474, FT 5829..5845) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH2411224.1" FT /translation="MITFLPLLLGLSLGCTGAGGFVAHVESTCLLDDAGTPKDFTYCIS FT FNKDLLTCWDPEENKMAPCEFGVLNSLANVLSQHLNQKDTLMQRLRNGLQNCATHTQPF FT WGSLTNRTRPPSVQVAKTTPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMPHSSAH FT KTAQPNGDWTYQTLSHLALTPSYGDTYTCVVEHIGAPEPILRDWTPGLSPMQTLKVSVS FT AVTLGLGLIIFSLGVISWRRAGHSSYTPLPGSNYSEGWHIS" FT intron 64..1850 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=1 FT exon 1851..2132 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=2 FT intron 2133..3359 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=2 FT exon 3360..3644 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=3 FT intron 3645..5163 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=3 FT exon 5164..5280 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=4 FT intron 5281..5438 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=4 FT exon 5439..5474 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=5 FT intron 5475..5828 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=5 FT exon 5829..5891 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=6 XX SQ Sequence 5891 BP; 1607 A; 1171 C; 1468 G; 1645 T; 0 other; agcagagcat gatcacattc ctgccgctgc tgctggggct cagcctgggc tgcacaggag 60 caggtaagga cacttcttct ggggactctc ccttcccctg ctcctgtttc agggtaaggg 120 tgttccgttt tgtaattgca tttgacaccc cagatagttt gtctccctgg tatacattcc 180 tatagcactt tgtactttgt agcaatttta atgtaattaa tctgtataat tatctgtgca 240 gtgtatattc cctgctggaa tataggcaag gacaatgttc atcttattta ttgctgcctc 300 ctcagctcct agcacagtgc cttgcatgca gcaagtgctt cataaatatg tgcgaagtga 360 atatttaata tttccagcac aatacaaggc tgactctttc tcttgaccct ttttctctct 420 caataatttg ccttactgaa ggtctgtgtt ctgggcaaat tgtcatgttt aaacatgcaa 480 ataatctcgg ggggctactc ctatccctgt gcttagtctt gcataaagag gagactggat 540 ctaaaaactt atctactact tctactgact ccctcaaatc agactttcag aaacttcagt 600 gtatgagctt ggtcagtaga tgttccctga gcaggaaatc tgtgccagac tagctggatg 660 tcaccaaggc ttaggttctg agctgaatat aggaaaaatc aacttttttt cttctatatg 720 ctcacactca acacttcttt gaccaactgt gtgaggtttt tttttttttt ttactcatac 780 caaccaattc tcctatatta gctggatatc ctataattca attccattgt gacattaact 840 agagttaaca tagacaccaa aggttaaaga ctcagtccca taagactgcc tccatttcag 900 acaccaatca caagtagtag gttcccaaat tacccacatc ttctgtccaa cttgcctaca 960 aatcagaggt tcccatgacc ccctccttgg ggttggtaat ttgctaaagt ggcttatgga 1020 actcaggaaa agtttactta ttattgtaga ttttttacaa aggatatttt aattgataat 1080 aataattata aatattcatg gggtggataa tgatgtttta gtacatgtaa tgtacagtga 1140 tcagatcaga tcatcatctc atttatcatt tctttgtgtt ggaaacattc catatccttc 1200 ttctagcgat ttgaaatgat ataaagtatt attgttaatg acagtcatcc cacagtggta 1260 tagaacacta gatcataatt ttgcatcctt taacaaagga tattttaaag catacaaagg 1320 aacatccaga tgaagagata ccagatctgg aagggtccca atcacaggag ctctgtcccc 1380 acagaattgg ggtacttcac ctcctggcat gtggatgtgt ttaccaactg agaagttctc 1440 tgaactccat agttccggga tttttatgga ggcttcatca tgtaggcatg actgattatt 1500 aactcaatct ccagcccctt ccccttcagg gagtatgggg gatgggacta aaagttccag 1560 acttctagtc atgacttggt ctttctggtg accagcccct cctgcaggag cccaccaaga 1620 gtacctcatt agaacaaaag acactcctgt tatctaggaa attctaagcg attaggcact 1680 ctatgtcagg aaccagggtc aaagacaaag ctctgtgcag agctcctaaa tatacgtctg 1740 tatgttttat atatttatta tttgtgtata tttattattt atatatttat ttatttattg 1800 ccaggccagt agaagacatt gacctgttct cccttccctg gctcctctag gtggcttcgt 1860 ggcccatgtg gaaagcacct gtctgttgga tgatgctggg actccaaagg atttcacata 1920 ctgcatctcc ttcaacaagg atctgctgac ctgctgggat ccagaggaga ataagatggc 1980 cccttgcgaa tttggggtgc tgaatagctt ggcgaatgtc ctctcacagc acctcaacca 2040 aaaagacacc ctgatgcagc gcttgcgcaa tgggcttcag aattgtgcca cacacaccca 2100 gcccttctgg ggatcactga ccaacaggac acgtgaggag agaggggtgc agaggggcta 2160 ccaggaagtg cagttaggag ggcaggccag ggaggatccc acagtggccc aggggtttga 2220 gatttgagca gcaaataaga gaaaatgtgt ggatctgaaa tgtagaaaga cggaggattg 2280 aacctcaagg ggaacaaggt ggctgacgtg agtggaacag gagtaaagaa ggggaggtga 2340 ggcttgaacc gcgaggtgcc atgtggggag cttatgcaga ggctggggca tctcaggatg 2400 catacccaag atgttcttgc cttgttatcc cagattttga tgttccagat ctgatgtggg 2460 cccaggcatg ggaatatttg gaatcccagg ggattctgac acatgctttt tctcaccctt 2520 aaactcttgc attgacaatg gcttgaagtt tgtgaaagta aacttgaaga tctccacagt 2580 acagaacagt gtgtctcaag ggtggtttct gaaccacctt tctcagaatt gcctggagga 2640 ggtgcttgtt aaagatgcaa gccccttagt accactccag atctgttgaa agaaagtatc 2700 tggggataca gcctaggaaa tctgcatttt aacataattc cttggatttt tatttaagat 2760 tgtgtttgaa aaatgtcaag atagaggcaa gcaagaggat cacctaggag agtaaattag 2820 taaaagatgg cagtattagc aatctcatta gtttgactac attcattcca aatttaagag 2880 tgagtcctaa gttaggcttg tttccttgaa ctatgtgagg agaaaaagct ttaactagca 2940 aaagaacgta ttaaacaaga tttggagaaa aattcctttt ccaccttaaa aaaacccaat 3000 gtacaactct ggattactct tagcttcctt atttcaaata ctttccagtt tatgtacttg 3060 aaataaatac aacaacttct agaacagctt gcagttcaga tctggctttt actaattgta 3120 atcaaacata attctggagg aggaaagaaa gaaaggggca atgaaggaat gggagagaag 3180 aaagagtaat gcaggaatac attctaacgg ttccccttca aggggcagca tggcagaggg 3240 ggctggggtg gaaagtgggt tgcaaaatct acgaagagtt gcgataggga agaaaccagg 3300 ttgaggaagc agccagaatg tcaccctcct tcctaaacat gtttttttct cctatgcagg 3360 gccaccatct gtgcaagtag ccaaaaccac tccttttaac acgagggagc ctgtgatgct 3420 ggcctgctat gtgtggggct tctatccagc agaagtgact atcacgtgga ggaagaacgg 3480 gaagcttgtc atgcctcaca gcagtgcgca caagactgcc cagcccaatg gagactggac 3540 ataccagacc ctctcccatt tagccttaac cccctcttac ggggacactt acacctgtgt 3600 ggtagagcac attggggctc ctgagcccat ccttcgggac tggagtaagt gtatggcaga 3660 tggatggaat tagggtcaaa gcagagaaaa tgagatgtgg atcgatacat ggtacatggt 3720 agacagcgaa gtgctgaaaa tggggactga gtctggagga acttacgggg ggcttaggac 3780 cagaatgggg aaatgggata aagaaatgga aatatttagg ttggtgcaaa agtaattgca 3840 gtttttgcca ttactttcag tggcaaaaac cgcaattact tttgcaccag tttaatattt 3900 agtctgtgct attgctgctc tggtggtgtg gttgatgttg ctgcgtctat gtttgagggt 3960 gagaggggag cgtgcttgct ttgaaatgag gatgtaaatt tggcaatcat attttcagaa 4020 ccccaaattg taatacacta ttctagcctc cttagatttc aactattctg gtgccagaag 4080 cagatgggag ctgaaggaat gatgaaggtt gaagaagggg ggcttttctt ggtgtggggc 4140 agtactgcat ttggcctgct ctaccaagca tacgggagta gtaaagccac ggctggcaga 4200 ccatttggca tgcatgctca ggggccagtg gataaagaat tacttacagt tcaaacactg 4260 tttgaactca gtgtcgggag tagttaaagg tatcgtgaga agttgcacac agctttgggg 4320 actcttggaa aagaaagagg aagaaatgag gaagaggaag ggtgtctaca aagggccaga 4380 gaacaggatc tcagatcagc tgctgtaacc aggtttcccc ttgtgggaag tgttgtttct 4440 tgctgggcag ttgggaaggg aatggagaac agagaagaga gtggaaatca catgctcact 4500 tgaactttcc tggggaacgt ctcctcacag cgtgcacaag agcctccctt tagaaatgga 4560 gtgttcattt tatcatggga aaagaatctg agtgggacat gattcagaac aggaccggcc 4620 caaggaagtg caggggctgt ggagtgggat ggagacaagc tctgaaagga cacatgggag 4680 atctagatgt aggaggtaca caagtagtag gataactcac aggatggatc cactggaggt 4740 taagacatgt ggtaagacag tgtaatagga agctgctcag ttggagaaag taaggaagca 4800 aacattgtta ccgtgggggc aatggagagg acagtgagga gccctttatc ctgataaggg 4860 tggctttggg gtaaaggaag gaaagaggat gccttgagag gccccactgt attagagagg 4920 acctggaagc caggatgcta attctgggga gatgggttcc ccaggcttac tctaggagta 4980 gaggtccatg ggacgagggt ttgatttgag aaagatcatt ttcttgggag tgggtggtgt 5040 gagctagacc cttggagctg ggataaagga ccttttaacc cactgagagg tggctgcaat 5100 aaatggaatt gccctggggg tgagcaacag aaactgggtc aagtaagttt ctattttttg 5160 cagcacctgg gctgtccccc atgcagaccc tgaaggtttc tgtgtctgca gtgactctgg 5220 gcctgggcct catcatcttc tctcttggtg tgatcagctg gcggagagct ggccactcta 5280 gtgagtgact cgctgaactc ccatccccac tcttggtccc actctctgct tactttctgt 5340 ttgtgattaa ctctctcctt cctactgcat ttgctatgaa tactgctaga tattttcatc 5400 cacaaagact ggtataatca agtatcttcc tctcttaggt tacactcctc ttcctgggtc 5460 caattattca gaaggtaaca tctctgttgg tctgtttccc tacttgccct ttggtagggg 5520 tgcgggttag aggggtcagt gttgggttca actaatcttg attattatat gggtgagctt 5580 ccatgaggat ctaggcaagg gcatgattta agctgccatt gctaggatta agagcaggaa 5640 ggagcatcct cctcttctac caagtgggat gtctgtggag aggaggctga aggtgcttcc 5700 tttgtattag ttgttggtgc cctggagttt tcagtatcac tgtattaagg catgggatgg 5760 ttacagtgac aaacgatggg ggcaagttgg gttgaagcct cattatctcc cttttattta 5820 ttctgtagga tggcacattt cctagaggca gaatcctaca acttccactc caagtgagaa 5880 ggagattcaa a 5891 //