Dbfetch
ID OW333106; SV 1; linear; genomic DNA; STD; HUM; 5891 BP. XX AC OW333106; XX PR Project:PRJEB51949; XX DT 14-MAR-2023 (Rel. 144, Created) DT 15-MAR-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-DMB gene for MHC class II antigen, cell line DE DKMS-LSL_ID20199591_DMB_1, allele HLA-DMB*01:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (29-MAR-2022) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; d39c9e5c7944447d95d40243771f31eb. XX FH Key Location/Qualifiers FH FT source 1..5891 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID20199591_DMB_1" FT /db_xref="taxon:9606" FT exon 1..64 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=1 FT CDS join(10..64,1850..2131,3359..3643,5163..5279,5438..5473, FT 5828..5844) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH2411163.1" FT /translation="MITFLPLLLGLSLGCTGAGGFVAHVESACLLDDAGTPKDFTYCIS FT FNKVLLTCWDPEENKMAPCEFGVLNNLANVLSQHLNQKDTLMQRLRNGLQNCATHTQPF FT WGSLTNRTRPPSVQVAKTTPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMPHSSAH FT KTAQPNGDWTYQTLSHLALTPSYGDTYTCVVEHIGAPEPILRDWTPGLSPMQTLKVSVS FT AVTLGLGLIIFSLGVISWRRAGHSSYTPLPGSNYSEGWHIS" FT intron 65..1849 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=1 FT exon 1850..2131 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=2 FT intron 2132..3358 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=2 FT exon 3359..3643 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=3 FT intron 3644..5162 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=3 FT exon 5163..5279 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=4 FT intron 5280..5437 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=4 FT exon 5438..5473 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=5 FT intron 5474..5827 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=5 FT exon 5828..5891 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=6 XX SQ Sequence 5891 BP; 1609 A; 1175 C; 1464 G; 1643 T; 0 other; gagcagagca tgatcacatt cctgccgctg ctgctggggc tcagcctggg ctgcacagga 60 gcaggtaagg acacttcttc tggggactct cccttcccct gctcctgttt cagggtaagg 120 gtgttccgtt ttgtaattgc atttgacacc ccagatagtt tgtctccctg gtatacattc 180 ctatagcact ttgtactttg tagcaatttt aatgtaatta atgtgtataa ttatctgtgc 240 agcgtatatt ccctgctgga atataggcaa ggacaatgtt catcttattt attgccgcct 300 cctcagctcc tagcacagtg cctgcaggca gcaagtgcct cataaatatg tgcaaagtga 360 atatttaata tttccagcac agtacaaggc tgactctttc tcttgaccct ttttctctct 420 caataatttg ccttactgaa ggtctgtgtt ctgggcaaat tgtcatgttt aaacatgcaa 480 ataatctcgg ggggctactc ctatccctgt gcttagtctt gcataaagag gagactggat 540 ctaaaaactt atctactact tctactgact ccctcaaatc agactttcag aaacttcagt 600 gtatgagctt ggtcagtaga tgttccctga gcaggaaatc tgtgccagac tagctggatg 660 tcaccaaggc ttaggttctg agctgaatat aggaaaaatc aacttttttt cctctatatg 720 ctcacactca acacttcttt gaccaactgt gtgaggtttt tttttttttt tactcatacc 780 aaccaattct cctatattag ctggatatcc tataattcaa ttccattgtg acattaacta 840 gagttaacat agacaccaaa ggttaaagac tcagtcccat aagactgcct ccatttcaga 900 caccaatcac aagtagtagg ttcccaaatt acccacatct tctgtccaac ttgcctacaa 960 atcagaggtt cccatgaccc cctccttggg gttggtaatt tgctaaagtg gcttatggaa 1020 ctcaggaaaa gtttacttat tattgtagat tttttacaaa ggatatttta attgataaca 1080 ataattatac atattcatgg ggtggataat gatgttttag tacatgtaat gtacagtgat 1140 cagatcagat catcatctca tttatcattt ctttgtgttg gaaacattcc atatccttct 1200 tctagcgatt tgaaatgata taatgtatta ttgttaatga cagtcatccc acagtggtat 1260 agaacactag atcataattt tgcatccttt aacaaaggat attttaaagc atacaaatga 1320 acatccagat gaagagatac cagatctgga agggtcccaa tcacaggagc tctgtcccca 1380 cagaattggg gtacttcacc tcctggcatg tggatgtgtt taccaactga gaagttctct 1440 gaactccata gttctgggat ttttatggag gcttcatcat gtaggcatga ctgattatta 1500 actcaatctc cagccccttc cccttcaggg agtatggggg atgggactaa aagttccaga 1560 cttctaatca tgacttggtc tttctggtga ccagcccctc ctgcaggagc ccaccaagaa 1620 tacctcatta gaacaaaaga cactcctgtt atctaggaaa ttctaagcga ttaggcactc 1680 tatgtcagga accagggtca aagacaaagc tctgtgcaga gctcctaaat atacgtctgt 1740 atgttttata tatttattat ttgtgtatat ttattattta tttatttatt tatttattgc 1800 caggccagta gaagacattg acctgttctc ccttccctgg ctcctctagg tggcttcgtg 1860 gcccatgtgg aaagcgcctg tctgttggat gatgctggga ctccaaagga tttcacatac 1920 tgcatctcct tcaacaaggt tctgctgacc tgctgggatc cagaggagaa taagatggcc 1980 ccttgcgaat ttggggtgct gaataacttg gcgaatgtcc tctcacagca cctcaaccaa 2040 aaagacaccc tgatgcagcg cttgcgcaat gggcttcaga attgtgccac acacacccag 2100 cccttctggg gatcactgac caacaggaca cgtgaggaga gaggggtgca gaggggctac 2160 caggaagtgc agttaggagg gcaggccagg gaggatccca cagtggccca ggggtttgag 2220 atttgagcag caaataagag aaaatgtgtg gatctgaaat gtagaaagac ggaggattga 2280 acctcaaggg gaacaaggtg gctgacgtga gtggaacagg agtaaagaag gggaggtgag 2340 gcttgaaccg cgaggagcca tgtggggagc ttatgcagag gctggggcat ctcaggatgc 2400 atacccaaga tgttcttgcc ttgttatccc agattttgat gttccagatc tgatgtgggc 2460 ccaggcatgg gaatatttgg aatcccaggg gattctgaca catgcttttt ctcaccctta 2520 aactcttgca ttgacaatgg cttgaagttt gtgaaagtaa acttgaagat ctccacagta 2580 cagaacagtg tgtctcaagg gtggtttctg aaccaccttt ctcagaattg cctggaggag 2640 gtgcttgtta aagatgcaag ccccttagta ccactccaga tctgttgaaa gaaagtatct 2700 ggggatacag cctaggaaat ctgcatttta acataatttc ttggattttt atttaagatt 2760 gtgtttgaaa aatgtcaaga tagaggcaag caagaggatc acctaggaga gtaaattagt 2820 aaaagatggc agtattagca atctcattag tttgactaca ttcattccaa atttaagagt 2880 gagtcctaag ttaggcttgt ttccttaaac tatgtgagga gaaaaagctt taactagcaa 2940 atgaacgtat taaacaagat ttggagaaaa attccttttc caccttaaaa aaacccaatg 3000 tacaactctg gattactctt agcttcctta tttcaaatac tttccagttt atgtacttga 3060 aataaataca acaacttcta gaacagcttg cagttcagat ctggctttta ctaattgtaa 3120 tcaaacataa ttctggagga ggaaagaaag aaaggggcaa tgaaggaatg ggagagaaga 3180 aagagtaatg caggaataca ttctaacggt tccccttcaa ggggcagcat ggcagagggg 3240 gctggggtgg aaagtgggtt gcaaaatcta cgaagagttg cgatagggaa gaaaccaggt 3300 tgaggaagca gccagaatgt caccctcctt cctaaacatg tttttttctc ctatgcaggg 3360 ccaccatctg tgcaagtagc caaaaccact ccttttaaca cgagggagcc tgtgatgctg 3420 gcctgctatg tgtggggctt ctatccagca gaagtgacta tcacgtggag gaagaacggg 3480 aagcttgtca tgcctcacag cagtgcgcac aagactgccc agcccaatgg agactggaca 3540 taccagaccc tctcccattt agccttaacc ccctcttacg gggacactta cacctgtgtg 3600 gtagagcaca ttggggctcc tgagcccatc cttcgggact ggagtaagtg tatggcagat 3660 ggatggaatt agggtcaaag cagagaaaat gagatgtgga tcgatacatg gtacatggta 3720 gacagcgaag tgctgaaaat ggggactgag tctggaggaa cttacggggg gcttaggacc 3780 agaatgggga aatgggataa agaaatggaa atatttaggt tggtgcaaaa gtaattgcag 3840 tttttgccat tactttcagt ggcaaaaacc gcaattactt ttgcaccaat ttaatattta 3900 gtctgtgcta ttgctgctct ggtggtgtgg ttgatgttgc tgcgtctatg tttgagggtg 3960 agaggggagc gtgcttgctt tgaaatgagg atgtaaattt ggcaatcata ttttcagaac 4020 cccaaattgt aatacactat tctagcctcc ttagatttca actattctgg tgccagaagc 4080 agatgggagc tgaaggaatg atgaaggttg aagaaggggg gcttttcttg gtgtggggca 4140 gtactgcatt tggcctgctc taccaagcat acgggagtag taaagccacg gctggcagac 4200 catttggcat gcatgctcag gggccagtgg ataaagaatt acttacagtt caaacactgt 4260 ttgaactcag tgtcgggagt agttaaaggt atcgtgagaa gttgcacaca gctttgggga 4320 ctcttggaaa agaaagagga agaaatgagg aagaggaagg gtgtctacaa agggccagag 4380 aacaggatct cagatcagct gctgtaacca ggtttcccct tgtgggaagt gttgtttctt 4440 gctgggcagt tgggaaggga atggagaaca gagaagagag tggaaatcac atgctcactt 4500 gaactttcct ggggaacgtc tcctcacagc gtgcacaaga gcctcccttt agaaatggag 4560 tgttcatttt atcatgggaa aagaatctga gtgggacatg attcagaaca ggaccggccc 4620 aaggaagtgc aggggctgtg gagtgggatg gagacaagct ctgaaaggac acatgggaga 4680 tctagatgta ggaggtacac aagtagtagg ataactcaca ggatggatcc actggaggtt 4740 aagacatgtg gtaagacagt gtaataggaa gctgctcagt tggagaaagt aaggaagcaa 4800 acattgttac cgtgggggca atggagagga cagtgaggag ccctttatcc tgataagggt 4860 ggctttgagg taaaggaagg aaagaggatg ccttgagagg ccccactgta ttagagagga 4920 cctggaagcc aggatgctaa ttctggggag atggattccc caggcttact ctaggagtag 4980 aggtccatgg gacgagggtt tgatttgaga aagatcattt tcttgggagt gggtggtgtg 5040 agctagaccc ttggagctgg gataaaggac cttttaaccc actgagaggt ggctgcaata 5100 aatggaattg ccctgggggt gagcaacaga aactgggtca agtaagtttc tattttttgc 5160 agcacctggg ctgtccccca tgcagaccct gaaggtttct gtgtctgcag tgactctggg 5220 cctgggcctc atcatcttct ctcttggtgt gatcagctgg cggagagctg gccactctag 5280 tgagtgactc gctgaactcc catccccact cttggtccca ctctctgctt actttctgtt 5340 tgtgattaac tctctccttc ctactgcatt tgctatgaat actgctagat attttcatcc 5400 acaaagactg gtataatcaa gtatcttcct ctcttaggtt acactcctct tcctgggtcc 5460 aattattcag aaggtaacat ctctgttggt ctgtttccct acttgccctt tggtaggggt 5520 gcgggttaga ggggtcagtg ttgggttcaa ctaatcttga ttattatatg ggtgagcttc 5580 catgaggatc taggcaaggg catgatttaa gctgccattg ctaggattaa gagcaggaag 5640 gagcatcctc ctcttctacc aagtgggatg tctgtggaga ggaggctgaa ggtgcttcct 5700 ttgtattagt tgttggtgcc ctggagtttt cagtatcact gtattaaggc atgggatggt 5760 tacagtgaca aacgatgggg gcaagttggg ttgaagcctc attatctccc ttttatttat 5820 tctgtaggat ggcacatttc ctagaggcag aatcctacaa cttccactcc aagtgagaag 5880 gagattcaaa c 5891 //