Dbfetch
ID OW333077; SV 1; linear; genomic DNA; STD; HUM; 5893 BP. XX AC OW333077; XX PR Project:PRJEB51949; XX DT 14-MAR-2023 (Rel. 144, Created) DT 15-MAR-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-DMB gene for MHC class II antigen, cell line DE DKMS-LSL_ID19864746_DMB_1, allele HLA-DMB*01:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (29-MAR-2022) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; f2592603940c9290cc365b25c26ead4e. XX FH Key Location/Qualifiers FH FT source 1..5893 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID19864746_DMB_1" FT /db_xref="taxon:9606" FT exon 1..64 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=1 FT CDS join(10..64,1852..2133,3361..3645,5165..5281,5440..5475, FT 5830..5846) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH2411134.1" FT /translation="MITFLPLLLGLSLGCTGAGGFVAHVESTCLLDDAGTPKDFTYCIS FT FNKDLLTCWDPEENKMAPCEFGVLNSLANVLSQHLNQKDTLMQRLRNGLQNCATHTQPF FT WGSLTNRTRPPSVQVAKTTPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMPHSSEH FT KTAQPNGDWTYQTLSHLALTPSYGDTYTCVVEHIGAPEPILRDWTPGLSPMQTLKVSVS FT AVTLGLGLIIFSLGVISWRRAGHSSYTPLPGSNYSEGWHIS" FT intron 65..1851 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=1 FT exon 1852..2133 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=2 FT intron 2134..3360 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=2 FT exon 3361..3645 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=3 FT intron 3646..5164 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=3 FT exon 5165..5281 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=4 FT intron 5282..5439 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=4 FT exon 5440..5475 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=5 FT intron 5476..5829 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=5 FT exon 5830..5893 FT /gene="HLA-DMB" FT /allele="HLA-DMB*01:new" FT /number=6 XX SQ Sequence 5893 BP; 1611 A; 1172 C; 1465 G; 1645 T; 0 other; gagcagagca tgatcacatt cctgccgctg ctgctggggc tcagcctggg ctgcacagga 60 gcaggtaagg acacttcttc tggggactct cccttcccct gctcctgttt cagggtaagg 120 gtgttccgtt ttgtaattgc atttgacacc ccagatagtt tgtctccctg gtatacattc 180 ctatagcact ttgtactttg tagcaatttt aatgtaatta atctgtataa ttatctgtgc 240 agtgtatatt ccctgctgga atataggcaa ggacaatgtt catcttattt attgctgcct 300 cctcagctcc tagcacagtg ccttgcatgc agcaagtgct tcataaatat gtgcgaagtg 360 aatatttaat atttccagca caatacaagg ctgactcttt ctcttgaccc tttttctctc 420 tcaataattt gccttactga aggtctgtgt tctgggcaaa ttgtcatgtt taaacatgca 480 aataatctcg gggggctact cctatccctg tgcttagtct tgcataaaga ggagactgga 540 tctaaaaact tatctactac ttctactgac tccctcaaat cagactttca gaaacttcag 600 tgtatgagct tggtcagtag atgttccctg agcaggaaat ctgtgccaga ctagctggat 660 gtcaccaagg cttaggttct gagctgaata taggaaaaat caactttttt tcttctatat 720 gctcacactc aacacttctt tgaccaactg tgtgaggttt tttttttttt tttactcata 780 ccaaccaatt ctcctatatt agctggatat cctataattc aattccattg tgacattaac 840 tagagttaac atagacacca aaggttaaag actcagtccc ataagactgc ctccatttca 900 gacaccaatc acaagtagta ggttcccaaa ttacccacat cttctgtcca acttgcctac 960 aaatcagagg ttcccatgac cccctccttg gggttggtaa tttgctaaag tggcttatgg 1020 aactcaggaa aagtttactt attattgtag attttttaca aaggatattt taattgataa 1080 taataattat aaatattcat ggggtggata atgatgtttt agtacatgta atgtacagtg 1140 atcagatcag atcatcatct catttatcat ttctttgtgt tggaaacatt ccatatcctt 1200 cttctagcga tttgaaatga tataaagtat tattgttaat gacagtcatc ccacagtggt 1260 atagaacact agatcataat tttgcatcct ttaacaaagg atattttaaa gcatacaaag 1320 gaacatccag atgaagagat accagatctg gaagggtccc aatcacagga gctctgtccc 1380 cacagaattg gggtacttca cctcctggca tgtggatgtg tttaccaact gagaagttct 1440 ctgaactcca tagttccggg atttttatgg aggcttcatc atgtaggcat gactgattat 1500 taactcaatc tccagcccct tccccttcag ggagtatggg ggatgggact aaaagttcca 1560 gacttctaat catgacttgg tctttctggt gaccagcccc tcctgcagga gcccaccaag 1620 agtacctcat tagaacaaaa gacacccctg ttatctagga aattctaagc gattaggcac 1680 tctatgtcag gaaccagggt caaagacaaa gctctgtgca gagctcctaa atatacgtct 1740 gtatgtttta tatatttatt atttgtgtat atttattatt tatatattta tttatttatt 1800 gccaggccag tagaagacat tgacctgttc tcccttccct ggctcctcta ggtggcttcg 1860 tggcccatgt ggaaagcacc tgtctgttgg atgatgctgg gactccaaag gatttcacat 1920 actgcatctc cttcaacaag gatctgctga cctgctggga tccagaggag aataagatgg 1980 ccccttgcga atttggggtg ctgaatagct tggcgaatgt cctctcacag cacctcaacc 2040 aaaaagacac cctgatgcag cgcttgcgca atgggcttca gaattgtgcc acacacaccc 2100 agcccttctg gggatcactg accaacagga cacgtgagga gagaggggtg cagaggggct 2160 accaggaagt gcagttagga gggcaggcca gggaggatcc cacagtggcc caggggtttg 2220 agatttgagc agcaaataag agaaaatgtg tggatctgaa atgtagaaag acggaggatt 2280 gaacctcaag gggaacaagg tggctgacgt gagtggaaca ggagtaaaga aggggaggtg 2340 aggcttgaac cgcgaggtgc catgtgggga gcttatgcag aggctggggc atctcaggat 2400 gcatacccaa gatgttcttg ccttgttatc ccagattttg atgttccaga tctgatgtgg 2460 gcccaggcat gggaatattt ggaatcccag gggattctga cacatgcttt ttctcaccct 2520 taaactcttg cattgacaat ggcttgaagt ttgtgaaagt aaacttgaag atctccacag 2580 tacagaacag tgtgtctcaa gggtggtttc tgaaccacct ttctcagaat tgcctggagg 2640 aggtgcttgt taaagatgca agccccttag taccactcca gatctgttga aagaaagtat 2700 ctggggatac agcctaggaa atctgcattt taacataatt ccttggattt ttatttaaga 2760 ttgtgtttga aaaatgtcaa gatagaggca agcaagagga tcacctagga gagtaaatta 2820 gtaaaagatg gcagtattag caatctcttt agtttgacta cattcattcc aaatttaaga 2880 gtgagtccta agttaggctt gtttccttga actatgtgag gagaaaaagc tttaactagc 2940 aaaagaacgt attaaacaag atttggagaa aaattccttt tccaccttaa aaaaacccaa 3000 tgtacaactc tggattactc ttagcttcct tatttcaaat actttccagt ttatgtactt 3060 gaaataaata caacaacttc tagaacagct tgcagttcag atctggcttt tactaattgt 3120 aatcaaacat aattctggag gaggaaagaa agaaaggggc aatgaaggaa tgggagagaa 3180 gaaagagtaa tgcaggaata cattctaacg gttccccttc aaggggcagc atggcagagg 3240 gggctggggt ggaaagtggg ttgcaaaatc tacgaagagt tgcgataggg aagaaaccag 3300 gttgaggaag cagccagaat gtcaccctcc ttcctaaaca tgtttttttc tcctatgcag 3360 ggccaccatc tgtgcaagta gccaaaacca ctccttttaa cacgagggag cctgtgatgc 3420 tggcctgcta tgtgtggggc ttctatccag cagaagtgac tatcacgtgg aggaagaacg 3480 ggaagcttgt catgcctcac agcagtgagc acaagactgc ccagcccaat ggagactgga 3540 cataccagac cctctcccat ttagccttaa ccccctctta cggggacact tacacctgtg 3600 tggtagagca cattggggct cctgagccca tccttcggga ctggagtaag tgtatggcag 3660 atggatggaa ttagggtcaa agcagagaaa atgagatgtg gatcgataca tggtacatgg 3720 tagacagcga agtgctgaaa atggggactg agtctggagg aacttacggg gggcttagga 3780 ccagaatggg gaaatgggat aaagaaatgg aaatatttag gttggtgcaa aagtaattgc 3840 agtttttgcc attactttca gtggcaaaaa ccgcaattac ttttgcacca gtttaatatt 3900 tagtctgtgc tattgctgct ctggtggtgt ggttgatgtt gctgcgtcta tgtttgaggg 3960 tgagagggga gcgtgcttgc tttgaaatga ggatgtaaat ttggcaatca tattttcaga 4020 accccaaatt gtaatacact attctagcct ccttagattt caactattct ggtgccagaa 4080 gcagatggga gctgaaggaa tgatgaaggt tgaagaaggg gggcttttct tggtgtgggg 4140 cagtactgca tttggcctgc tctaccaagc atacgggagt agtaaagcca cggctggcag 4200 accatttggc atgcatgctc aggggccagt ggataaagaa ttacttacag ttcaaacact 4260 gtttgaactc agtgtcggga gtagttaaag gtatcgtgag aagttgcaca cagctttggg 4320 gactcttgga aaagaaagag gaagaaatga ggaagaggaa gggtgtctac aaagggccag 4380 agaacaggat ctcagatcag ctgctgtaac caggtttccc cttgtgggaa gtgttgtttc 4440 ttgctgggca gttgggaagg gaatggagaa cagagaagag agtggaaatc acatgctcac 4500 ttgaactttc ctggggaacg tctcctcaca gcgtgcacaa gagcctccct ttagaaatgg 4560 agtgttcatt ttatcatggg aaaagaatct gagtgggaca tgattcagaa caggaccggc 4620 ccaaggaagt gcaggggctg tggagtggga tggagacaag ctctgaaagg acacatggga 4680 gatctagatg tagaaggtac acaagtagta ggataactca caggatggat ccactggagg 4740 ttaagacatg tggtaagaca gtgtaatagg aagctgctca gttggagaaa gtaaggaagc 4800 aaacattgtt accgtggggg caatggagag gacagtgagg agccctttat cctgataagg 4860 gtggctttga ggtaaaggaa ggaaagagga tgccttgaga ggccccactg tattagagag 4920 gacctggaag ccaggatgct aattctgggg agatggattc cccaggctta ctctaggagt 4980 agaggtccat gggacgaggg tttgatttga gaaagatcat tttcttggga gtgggtggtg 5040 tgagctagac ccttggagct gggataaagg accttttaac ccactgagag gtggctgcaa 5100 taaatggaat tgccctgggg gtgagcaaca gaaactgggt caagtaagtt tctatttttt 5160 gcagcacctg ggctgtcccc catgcagacc ctgaaggttt ctgtgtctgc agtgactctg 5220 ggcctgggcc tcatcatctt ctctcttggt gtgatcagct ggcggagagc tggccactct 5280 agtgagtgac tcgctgaact cccatcccca ctcttggtcc cactctctgc ttactttctg 5340 tttgtgatta actctctcct tcctactgca tttgctatga atactgctag atattttcat 5400 ccacaaagac tggtataatc aagtatcttc ctctcttagg ttacactcct cttcctgggt 5460 ccaattattc agaaggtaac atctctgttg gtctgtttcc ctacttgccc tttggtaggg 5520 gtgcgggtta gaggggtcag tgttgggttc aactaatctt gattattata tgggtgagct 5580 tccatgagga tctaggcaag ggcatgattt aagctgccat tgctaggatt aagagcagga 5640 aggagcatcc tcctcttcta ccaagtggga tgtctgtgga gaggaggctg aaggtgcttc 5700 ctttgtatta gttgttggtg ccctggagtt ttcagtatca ctgtattaag gcatgggatg 5760 gttacagtga caaacgatgg gggcaagttg ggttgaagcc tcattatctc ccttttattt 5820 attctgtagg atggcacatt tcctagaggc agaatcctac aacttccact ccaagtgaga 5880 aggagattca aac 5893 //