Dbfetch
ID OW150002; SV 1; linear; genomic DNA; STD; HUM; 4900 BP. XX AC OW150002; XX PR Project:PRJEB51513; XX DT 14-MAR-2023 (Rel. 144, Created) DT 15-MAR-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-DMA gene for MHC class II antigen, cell line DE DKMS-LSL_ID20199514_DMA_1, allele HLA-DMA*01:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (14-MAR-2022) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; d00edaf65b129c45be74295e8797687d. XX FH Key Location/Qualifiers FH FT source 1..4900 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID20199514_DMA_1" FT /db_xref="taxon:9606" FT exon 1..402 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /number=1 FT CDS join(315..402,2546..2830,3460..3738,3950..4078,4481..4485) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH2029762.1" FT /translation="MGHEQNQGAALLQMLPLLWLLPHSWAVPEAPTPMWPDDLQNHTFL FT HTVYCQDGSPSVGLSEAYDEDQLFFFDFSQNTRVPRLPEFADWAQEQGDAPAILFDKEF FT CEWMIQQIGPKLDGKIPVSRGFPIAEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWQH FT HSVPVEGFGPTFVSAVDGLSFQAFSYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNA FT LPSDLLENVLCGVAFGLGVLGIIVGIVLIIYFRKPCSGD" FT intron 403..2545 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /number=1 FT exon 2546..2830 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /number=2 FT intron 2831..3459 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /number=2 FT exon 3460..3738 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /number=3 FT intron 3739..3949 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /number=3 FT exon 3950..4078 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /number=4 FT intron 4079..4480 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /number=4 FT exon 4481..4900 FT /gene="HLA-DMA" FT /allele="HLA-DMA*01:new" FT /number=5 XX SQ Sequence 4900 BP; 1094 A; 1248 C; 1209 G; 1349 T; 0 other; ctgacagctt gaaaccaaag agggaactcc accaggaagc aacattcctc cactgggctt 60 cccagcccag ttacatgcca tactctgccc tggtcaaaca gccaagtctt caggaggtta 120 ctggccccag gcgtctcccc agtgactgat gatgttaaac cctacgcttc tctgattggt 180 ttagacaaaa tgacaagggc acctattgga aatgatctgg caaaacatga tctaaggcca 240 ccctctcggg gagggagttg gggaagctgg gttggctggg ttggtagctc ctacctactg 300 tgtggcaaga aggtatgggt catgaacaga accaaggagc tgcgctgcta cagatgttac 360 cacttctgtg gctgctaccc cactcctggg ccgtccctga aggtaagatg gtactcctat 420 ttacttccat cctgaaccta gggagcccac tcagctttgt gaggaaaagc gctgtgcttt 480 gtgagtggtg ggaagtctta tgaggcagtg gaaacaacag gggagtgggg aaagacagct 540 gctatgtgtg gttggtaaac gatatcagtg atgctttgca tgttccattt aagacaatct 600 cttgaagcgg agattgttct ctccatttta caaatgaaga aaatgagact cagagttatt 660 tgtgcaagtt cacaccattg gaaagtggta gagctgggat ttgaacaaag tgaatgttat 720 tttcactcct ccactcaaga ttctactctg ctttctatca ttaacttatc ttgtgattct 780 tgaaaagtgt cttagtttcc ttctctgtag aggatggggc agaatggaag aataatctgg 840 aagatccctc ttcctccaaa tgtctgtttt tctgggtatt gggttaaagg tttcctgctg 900 gctgagcgat tcctgccaag agcttcaaag aagagggatt attttatgca gttatggggt 960 cacttctccc attgctgtct ttgggaggcc tggtaggtta aggaacagaa gacattttga 1020 gagacgcttg gtgccaatga agtggctgaa gaaatgtctg gatacaggtt ttccaattta 1080 ccatttgtgt ctggggatag tgggaggcag tcccatctat ggcttgggga ggctgtagcc 1140 attcctcctc tttcccttct aagagtgaga aacccatcca tggccttctc tagtcaatac 1200 agtggcctgg tatgaattag acaaaggaat cccctttggg aggatacagc cctatgccag 1260 gatgtatggc atggtgagca gaatgcaggc tttcacttgc ttctttggct aggtgtcttt 1320 gtgcagcccc caaacacaca atgaacagtg actctgaatc tgtcacttta ttttatatat 1380 atacattttt aaatttttta tttgatttaa tttatttttt ttgacacggc atctcgctct 1440 gtcacccagg ctagagtgca gtgacgtgat ctcggctccc tgcaacccct gcctctgggg 1500 ttcaagagac tctcctgcct cagcctccca agtagctggg attacaggcg catgccacca 1560 cacccagctg atttttgtat ttttagtaga gatggggttt cattatgttt gccaggctgg 1620 tctcaaactc ctgacctcag gtgatccacc cgccttggcc tcccaaagtg ctgggattac 1680 aagcttgagc caccgcgccc ggcctttata tatatatttt ttgagacggg ctcattctgt 1740 cacctgggct ggagtccagt ggcacaatca tggctcactg cagccccaac ttcctaggca 1800 caagcaatcc tcctgcctca gcctccagag tagctgagac cacaggtgtt tgccaccaca 1860 cctggctaag tttttgtatt ttttgtagag acggtctcgc tgtgttgccc aggttggtct 1920 tgaactcctg ggctcaagca atctgcctgc ctcagcctcc caaagtgctg ggattacagg 1980 catgagccac catgcctggc ctgaatctgt cactttagaa agtagaactc tttacttttg 2040 ccaactggcc tttttatagg caggggaagc ttggagagat gccataattt gttcttcacc 2100 ccctttggga gggggagtct aaataacaga cacaggaaag ggtctcacct cagcccacgc 2160 tccttaagca ggccttgctt gtttttgttg ttttgttttg agacagagtc tcactctgtc 2220 acccaggctg gagtgcagtg gcttaatctt agctcccggc aacctctgcc tccctggttc 2280 aagcaattct cctccctcag cctcccgagt agctacaggc gcatgccaac atgcccagct 2340 acttttttgt atttttagta gagatggagt ttcaccatgc tggccaggct ggtctcaaac 2400 tcctgacctc atgatccacc caccttggcc tcccaaagtg ctgggattac aggcatgagc 2460 cactgcgcct agccccacct tgctgttttt taagttggag gagaaggctc ccacctccct 2520 gaacctcacc ctgtgtcctt tgcagctcct actccaatgt ggccagatga cctgcaaaac 2580 cacacattcc tgcacacagt gtactgccag gatgggagtc ccagtgtggg actctctgag 2640 gcctacgacg aggaccagct tttcttcttc gacttttccc agaacactcg ggtgcctcgc 2700 ctgcccgaat ttgctgactg ggctcaggaa cagggagatg ctcctgccat tttatttgac 2760 aaagagttct gcgagtggat gatccagcaa atagggccaa aacttgatgg gaaaatcccg 2820 gtgtccagag gtcaggagtt ttctggggag tgaagggagg agggctgcat taacctcatt 2880 gatctgtaca ctgaataatt ccccttgata ccagctcccc atctcaaata ctttctggtt 2940 ctctgcatca ccttaatttt tccaccagcc ttggtctgca ccctgtgttc ttttggtggg 3000 ccgaagtacc tagcatgtag taggcattca gaactatgta ttgaatgtga tgaattcaac 3060 aggtaccaac tgatacctac tgaatattaa cacttgtgct actatgccca gcaagatgga 3120 tgggaagagt ggaaatatct gatgacgtga ctatgtctta gtgagaagac agtgcatggt 3180 tagacatcaa tgtgagctct agacaggaag tgctgaagga agtcatggtg gaggggtcca 3240 gagtagcctg gatctggctc tgcttctacg tctagctgca gtccttgcct ggaagaagac 3300 ctcccttcag agcccagctc ctcgctcatc tctgtctccc aaagcctgac ccactgtgtt 3360 cttctctgcc ctcccctcca tatgccatgg cccctccaaa cacagagata ccatctaaac 3420 tagtctcttt ttccccctac acttcaatcc ccccaccagg gtttcctatc gctgaagtgt 3480 tcacgctgaa gcccctggag tttggcaagc ccaacacttt ggtctgtttt gtcagtaatc 3540 tcttcccacc catgctgaca gtgaactggc agcatcattc cgtccctgtg gaaggatttg 3600 ggcctacttt tgtctcagct gtcgatggac tcagcttcca ggccttttct tacttaaact 3660 tcacaccaga accttctgac attttctcct gcattgtgac tcacgaaatt gaccgctaca 3720 cagcaattgc ctattggggt gaggctttct ccctggaatt ctggtccttt tgggggcaaa 3780 aagggataga tccatgggag gaggcttctt tctccactgg taccttgttt agtccattcc 3840 taccctaagc ccatcccagt ctcccatgtc atcccagaca cccacgtcat ttccctgggt 3900 gggaggctcc ctaactaggt ccccaggctg agccactcat ttcctccagt accccggaac 3960 gcactgccct cagatctgct ggagaatgtg ctgtgtggcg tggcctttgg cctgggtgtg 4020 ctgggcatca tcgtgggcat tgttctcatc atctacttcc ggaagccttg ctcaggtggt 4080 atgtcatctg gagggggcgg gtgagcctgt gggagccaga tacagtggtg catgcgtgca 4140 tgtgtcagga ttattttgtg gcatgggggg acatatagcg atcctcaggc ccttgggtgt 4200 gggggcctgt atccagcacc atgggggcac atcttcccag ttggggaccc agttacacac 4260 acacagttat gggtcacaag aattgctttg agtgaaaaaa ggaatcatgg ggtgctgtag 4320 gaagggtgct tggagatgat ttgggaacaa ggagagatca acttctgcag ggtgtggtgc 4380 aggcagggcg agcaaggcct ttgtggggga ggaggaggag gagaaggagg aggaggatgg 4440 atcccctgat gcctttcctc catccctgtc tctcccccag actgattctt ccagaccaga 4500 gtttgatgcc agcagcttcg gccatccaaa cagaggatgc tcagatttct cacatcctgc 4560 ccaggatctc ctcttagggt agaagaagtc tctgggacat ccctggggtg tgtgtgtaga 4620 tttcccacct ggggactctg ctgtccctgg gcttgcatcc cagggatccc agagtggcct 4680 gcctatcaca accacatccc ttccccccac aaggcaataa atctcatttc tttatatcag 4740 tgtggcttct ttcttaactc atggtatttg tttctggata tctcaacttg agtgggttgt 4800 cgtttcaaat tcagcatgcc ttaacctgaa cacagcttga cctcgttagg gagggaaata 4860 gggaaaaccc ctaatttgcc agctgagctc ttattccctg 4900 //