Dbfetch
ID OV725459; SV 1; linear; genomic DNA; STD; HUM; 10898 BP. XX AC OV725459; XX PR Project:PRJEB50369; XX DT 14-MAR-2023 (Rel. 144, Created) DT 15-MAR-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-DRB1 pseudogene, cell line DKMS-LSL_ID19285152_DRB1_1, DE null allele HLA-DRB1*15:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (24-JAN-2022) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; 62dcda4c81bae450c2a84d1206511361. XX FH Key Location/Qualifiers FH FT source 1..10898 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID19285152_DRB1_1" FT /db_xref="taxon:9606" FT exon 1..151 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=1 FT CDS join(52..151,5416..5686,7951..8232,8933..9043,9519..9542, FT 10685..10698) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /note="MHC class II antigen null allele" FT /pseudogene="allelic" FT intron 152..5415 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=1 FT exon 5416..5686 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=2 FT intron 5687..7950 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=2 FT exon 7951..8232 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=3 FT intron 8233..8932 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=3 FT exon 8933..9043 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=4 FT intron 9044..9518 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=4 FT exon 9519..9542 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=5 FT intron 9543..10684 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=5 FT exon 10685..10898 FT /gene="HLA-DRB1" FT /allele="HLA-DRB1*15:new" FT /number=6 XX SQ Sequence 10898 BP; 2846 A; 2193 C; 2643 G; 3216 T; 0 other; gagtgagact tgcctgcttc tctggcccct ggtcctgtcc tgttctccag catggtgtgt 60 ctgaagctcc ctggaggctc ctgcatgaca gcgctgacag tgacactgat ggtgctgagc 120 tccccactgg ctttgtctgg ggacacccga cgtaagtgca cattgcgggt gctgagctac 180 tatggggtgg ggaaaatagg gagttttgtt aacattgtgc ccaggccatg tcccttaaga 240 aattgtgacg ttttcttcag agattgccca tctttatcat tggatcccaa attatttcct 300 ccataaaagg agcttgggta cttgccctct tcatgagact tgtgtaaggg gcctttgcac 360 aaatcatttc ttttcaaatc tccaccaata aaacctttgc atcacatgtc ctcagggtct 420 ttagaggatt tagaaataag gattctaaaa taaattcccc atacagcact tccctttatt 480 atgttgactt atgtcagaca aaaggaggtt cttactgaaa attttgtggg agtcaaggga 540 attcaaaggg tctctcctag acgatccagt gttaggttcc ccacaggacc tttggtgttg 600 gccatagtcc tcatatgtga ggatggaccc agtggcctcc ccattatctc ctttcttttc 660 ttgctgaact ccaatgttta taaggcctgt atccctgtag tgtatgtagg ttctctgaca 720 gaagttatac ttagtgctct tcctttcttg tggggaaaag tccctggaac tgaagctgag 780 attgttaata cttggagtca ccttacagat acagagcatt tatgaggtat tctttggtgc 840 ctaaagaact taaggcatcc tctgaaaaac tagcccaggt tcgtgttcat tatgaatctt 900 ttttaacctt tctgtacttg tttctcttgc atctcctatg tgctctaact agacatgaca 960 gaagagattt aactaatgta taaattatat gaaattctat tttttaagtc aaaaataatc 1020 aactatcaga aatttaataa tgttcaaact atatactctg tgtggggtta ccgagatgat 1080 gtgaacattg ttcacgtctc atagggctga aagtcaatgg gcaagtcttg ggaactcatt 1140 gtcttactgg ggtcttgtcc taaatttcct aggttcaccc atcatgccct cagctttcct 1200 taactagcca tgtctgctta cctcttcctc cagtttctat ttttccccag ctatgttgtc 1260 atcatttcca gaaatctcta aagcttgcac agaaccttag cactatgaga ttcattgaaa 1320 gagacttttt ttctcttttt gaggtagggc ctggctctgt cacccagtct atagctcagt 1380 ggtgtgatcg aggctcactg caacctctgc cacttatgct caagtgatcc tccctcctca 1440 ggctccagag tagctgggaa tacaggcagg caaccacgcc cagctaattt ttgtaatttt 1500 ggtagacatg agattttgcc atgttgccca ggctggtctt gaactgctgg actcaagcaa 1560 tcctcctgcc ttggcctccc aacatgctag gattatagat gtgagacact gtgcccaggc 1620 aaaagagatg actcttaata aaaaaatttc ctttttctta aatcactgtt tctttatctg 1680 tgaattcttc ttccaactag aaggaggaga aaaaagaagt ttgcctgtat ttatcactgg 1740 gaggagaagg ggtctagtgt gacattaaaa tgaaagagtg ctggagcttg agccccttct 1800 tgctttccag gatccctaca gtgatcagtt cccataccct ggtttattca tgtaaaccac 1860 acttattttt ctcagcagct actctttact gggctccatt ctaggttcaa atcattctat 1920 ttgattaagt tagagagcgt ccctactctc atggaagtta cacaagagta gaggagacag 1980 acactaaccc aataagcatt taacaaagaa gataatgtta gagagtcata gtgcactgaa 2040 gaaaagacat caggtttgtg aaaaagagag acatggattc acctacttta gttcatatgt 2100 tagggagctc cacctgagaa agtgacattc agctgagaca acaaaataag tagacagtcg 2160 tgaagatcta agggatgaaa gttccaggga gaccgaatcg ggggaaagcc ctgatgtgtt 2220 aaattatgtg gagggagaga aagaaagcta gaggggctga tgtatagaaa gcaaggaaat 2280 ggagaggcag aagatgaggg taggacacag agaggaattc aggagcctca tcattatagg 2340 ctctgatgtc cacagtaaaa aaaaattaaa ttttattatt tatttatttg tttgtttatt 2400 ttattttatt ttgtgatgga gtctctctct gttgcccagg ctagattgct gtggcacaat 2460 ctcggctcac tgcaacctcc gcctcctggg ttcaagcgat tctcctgcct cagcctcccg 2520 attagctggg gccacaggcg catgccacca cacctggcta attttttgta tttttagtag 2580 ggatagggtt tcaccgtgtt agccaggatg gtctcgatct cctgacctcg tgatccgccc 2640 gccttggcct cccaaagtgc tgggattaca ggcgtgagcc actgcgcccg gcctatattc 2700 aatgtttaaa actaattcta gctactctgt ggggattgga ttgttggggt tcactagtgg 2760 ttaggaagac tatttaggag cacagcaggg aattcttcag ggaaaacagg tttgtggctt 2820 catggagtgc attagtgata aagatggtga aaaagataaa gtggacagac ttggcatgta 2880 tttttgctta gcttgttaat gaattactgt aaagggggta gaacaatcaa gcttattcct 2940 aaggattttc ttttgacaaa taaatgggtg gtagtgttgt ttattgagat aggaaaaact 3000 atgggaggaa atgatttgaa gtgggtggtt tgaaataaaa gttttgttta aatatgagat 3060 gattgattga catttatgtg gagaaatccg aaggtcaatg gcatttaaga gactcatggt 3120 gaggccaggg cttcaggtat ttatgttggc agcagcaata cgtgtagtgt gttaaattcc 3180 agggcgtgga agaggataca tagggagatg gattgtgtga agaaaaaaga acagggcaca 3240 ggccagcaaa gggggctgag aaagagccca aggatgctgg agaaaaacca agagaacatc 3300 atgtgtgtaa gtccaggaaa atagattatt ttcaaggaga agggagaggc caattgtggt 3360 gagtaccact aagaggaggg gcaagtgaga atatgataga gaagcaagtg ctgggtttgg 3420 tggagtcgat atttgcagtc aatggagcat ccaggtagga aactggattg gaccatttga 3480 agagtgagta aaagtgagga cgaggttaag gttgactgtt ttgagtagag agcttcaggg 3540 aaggattgtt ctctgggttc agggagccag ctgaacctaa aggaaaaggc taaagaagct 3600 gaagagaagg aggaggacct gtgaaccaga gatgctcagt cattattagc gaggaaatac 3660 ggagagcccc tgtgtgcagt ggtgactact catgcaaaat gtcacacagc caatatttaa 3720 cacagccagt atttcacaca gccaatattt attagtgaca tagcatatac cagttattac 3780 tctaggtcat gagaatggag tgataaataa aatgaatcca gtcgccatca ctatatgcca 3840 tgtaacattt tgcaatgact gtgtatcagg cctatgaatt tcagtattca atttcaataa 3900 tgatcctgtt gtatctgtgg tatttaaaaa catatacatc tctggaatct aaaattgaga 3960 ggttataagt aacacccagt attacaaatt tagtgctgga aatcagattg cagtttaaat 4020 ctgagcatat agaaagtccg tttcttctat gtcagcagat gctttttgtg tgaggtttag 4080 gtatactgca ttatttgaca taaaccagtg tttctgccct atgtcttcag aatgacaatt 4140 ctttatgaaa ctaatagaag aacagaagac aattgcaaaa tcatgatgaa gatactaatt 4200 gctttagaat taaggaatac aaaaaataat atgagctgca gttataggat cagaaaagtt 4260 aaaatgggaa tgtattcgag tgtttattat gtgatcagtg ctaagaagtg tcatcattta 4320 attttacact taacggtaat cctgtgagga ttacgctatt attaaatgca tttgatagat 4380 tacaaaaagg cttatggttg gtaaaaattg acccaagtag aagagatcgt gtttttattc 4440 aggttttctg attatagagt ttgagagttt gaccatcatt agtgagtagt gactatattg 4500 tgtctgaatt attgacacaa tttctgatat tcatatgtac caggctgttt cttagagtgg 4560 ggacagaaat gcaagggctg ctagttctga tgtataggag aaactttcat tcattttgca 4620 tttatcattt taaacgttgt atatgtctat ctgggcatgt gttcaagaac acaaggaagt 4680 attaaatcac tccttcttct gaggtttgac tagcaagttg ggctagagtt acaaataaaa 4740 tacaggttcc tagtgaaatc tgaatttcag atacacaacc ataatttatt ggaaatccaa 4800 atttaactgg gaatcttcta ttattctctg ctctagaacg ccacacttct gatatttctc 4860 attgctgtct aagctcttgt gtgtttggtt tttggccatc gctttcactg ctctttaagc 4920 tcccccagag gagtggagag gtctgttttc cctcgtttgg attcctagag gcagcgcagg 4980 cctggcacaa ggtcatcact aaggaagtgt tcacagggtg aacgcggtgg gtgctgttga 5040 aggtaccggt aaagcgtgtg ggatgagagg agcagagagt gtctttgggg ctcccaggag 5100 gaggcggcgc gggctgcggt gctgggcgga tcctcctcca gctcctgctt ggaggtctcc 5160 agaacaggct ggaggcaggg agggggtccc aaaagcctgg ggatgagaag gggttttccc 5220 gcatggtccc ccaggccccc gttcgcctca ggaagacgga ggatgagctc ctgggctgca 5280 ggtggtgggc gttgcgggtg gggccggtta aggttccagc gcccgcaccc cgctcaggga 5340 gccccggatg gtggcgtcgc tgtccgtgtc ttctcaggag gccgccctgt gaccggatgg 5400 ttcgtgtccc cacagcacgt ttcctgtggc agcctaagag ggagtgtcat ttcttcaatg 5460 ggacggagcg ggtgcggttc ctggacagat acttctataa ccagggagga gtccgtgcgc 5520 ttcgacagcg acgtggggga gttccgggcg gtgacggagc tggggcggcc tgacgctgag 5580 tactggaaca gccagaagga catcctggag caggcgcggg ccgcggtgga cacctactgc 5640 agacacaact acggggttgt ggagagcttc acagtgcagc ggcgaggtga gcatggccgc 5700 gggcggggcc tgagtccccg tgagctggga atctgagtgt gtgtgtgtgt gtgtgtgtgt 5760 gtgtgtgtgt gagagagaga cagagagaga cagagagagg aagagagaga gagagcgcca 5820 tctgtgagca tttagaatcc tctcagtccg gagcaagcag ttctgagagc acaggtgtgt 5880 gtgtaaagtg tggatttgtc tgtgtctgtg tgtctgttgt gggaggggag gcaggagggg 5940 gctgtttctt atccttggag acctctgtgg ggaggtgaca agggaggtgg gtgctggggg 6000 ctggagagag aggagacctt gattatctcg gtccttagag atgcagggaa gggaaatgta 6060 aggtgtgtgt ggttggggtg aaggtttagg ggaggactgc tgaggggtaa ggcaggtttg 6120 ggataatgtg aggaggccag ttccagactc tccctggcat acacccttcg tgtaatctct 6180 gaattaaaag tgtgtgctgt ttgtttgtaa aagcaataga ttaatttcta gaggaactga 6240 gtagacctct gaggcacctc tgaagcttct ttagatctaa atttcttcct agttttttgt 6300 ttttttcagt gtgtatattt ttacatagta gaaatgactg tgaaactaac tttttgaatt 6360 aaagttttga cacggttact attttattat aatgctggta gttttctagt agttacatat 6420 tattctttta tatataatat ttgtgacaca actcacctca ctttcccgtt tgttgacctt 6480 tattatgaca ttcaccagaa gttgaaattg tgtgtttctg gttaattttt aatttatatt 6540 ttttatttgt aattcctttg aattattttg ccctatttat tggccgatta taattattgc 6600 tctaagaatt ccctattgta tttggtaggt aatggacaat gatctacggt ctaatatctt 6660 gagggcttag tatttttctc agtgactttc tgcgttcttt gtactataag attattaaca 6720 ctttattgat atttgatcca gcatttgctc cagtttgtgg tttgtatgtg gattttgaaa 6780 attcttttcc atgttaagaa tttgaacatt tttatttaat aaaatatatt gcaacatttt 6840 tattaatgat ctacaatcca tctgaaatct gccattttgt ggcattgttg tctccaggtt 6900 tctccttact tctaaaaaaa tagttgtatt tattgagagt atgctagtgt cggggatttt 6960 cctgggcata agcaccccaa gtaacgagtc ccagacactg ccttaatcca aatgtgattc 7020 tggaaagaaa aatcatttta caatgatagg cctaataata attatgcttg tgttgcacgg 7080 gagatgcatt gatcagctaa atgtaaatat aagaactttc aaaacttaaa tgacgttccc 7140 taatccttct ctctgcttca ggactcatgc ttttctagga aagtaaaaat ttggagaatc 7200 atttctgtct gtcccacctt cccaggggca gaacaatttc tgttgtgttc taaggtgtga 7260 gtgcatggga gtagtattcc taaaattcat acttggtttc ctcatgtacc caactctgtc 7320 cctttatcta tgcatattgc tttaaatcat atttttctgt caaggtgtac aaggatgata 7380 aataggtgcc aagtggagca ctcaagtgtg atgagtgccc tcacagtgga atggagtgag 7440 aagctttctg acctcataaa ctgaaggcta tcttcagtca ttgttttata tattttacgt 7500 gcattaatcc tcatataacc ccaagaggta aattagtata attatccttc attgtaggtg 7560 acaaagttga gacacagaag aatcaaaaaa ctcttccagg atcaaccagt aaaaggcaga 7620 ccttggattc gaaccaggca acctggctca aatatcagtt ttaattacta cactctgtac 7680 tttccaagat ttgtaaacag tttgacaatg catgccgatt taaaactatg aagaaacaaa 7740 cacaattttt cacaacacct ctcaaatcta atgggtcctc actgtcaaga ttaaattcca 7800 ggctgatgac actgtaaggt cacatggcca gctgtgctat aggcctggtc aaggccagag 7860 cctgggtttg cagagaagca gacacacagc caaaccagga gacttactct gtcttcctga 7920 ctcattccct ctacgttgtt tttctcctag tccaacctaa ggtgactgta tatccttcaa 7980 agacccagcc cctgcagcac cacaacctcc tggtctgctc tgtgagtggt ttctatccag 8040 gcagcattga agtcaggtgg ttcctgaacg gccaggaaga gaaggctggg atggtgtcca 8100 caggcctgat ccagaatgga gactggacct tccagaccct ggtgatgctg gaaacagttc 8160 ctcgaagtgg agaggtttac acctgccaag tggagcaccc aagcgtgaca agccctctca 8220 cagtggaatg gagtgagcag ctttctgact tcctaaattt ctcacccact aagaagggga 8280 ccgtgctaat ccctgagtgt caggttcctc ctctcccaca tcctatttta atttgctcca 8340 tgttctcatc tccatcagca caggtcactg ggggtagccc tgtaggtgtt tctagaaaca 8400 cctgtacctc ctggagaagc agtctcgcct gccaggcggg agagactgtc cctcttttga 8460 acctccccat gattttgcag gtcagggtca cccactctcc caggctccag gccctgcctc 8520 tgggtctgag actgagtttc tggtgctgtt gctctgagtt attttttgtg atctgggaag 8580 aggagaagtg taggggccta cctgacatga ggggagtcca atctcagccc tgctttttat 8640 tagctttgtc actctagaca aactacttat cctcattgag tctcaggctt tctgtggatc 8700 agatgttgaa cttgtgcctt acatcaaggc tgtaatattt gaatgagttt gatgtctgaa 8760 cgtcgtaact gttcagtgta atttgaaatc ctttttttct cctgaaatgg ctagttattt 8820 tagttcttgt gaggcagctt tctgccccat tttcaaagct ctaaatctta gagtctcaag 8880 taaaaaggtt caatttggaa taaacatcac taaacctggc ttcctctctc aggagcacgg 8940 tctgaatctg cacagagcaa gatgctgagt ggagtcgggg gctttgtgct gggcctgctc 9000 ttccttgggg ccgggctgtt catctacttc aggaatcaga aaggtgagga gcctttggga 9060 gctggctctc tccataggct tttctggagg aggaactatg gctttgctga ggttagttct 9120 cagtatatga gtggccctga ataaagcctt tctttcccca aacggctcta atgtcctgct 9180 aatccagaaa tcatcagtgc atggttacta tgtgaaagca taatagcttg tggcctgcag 9240 agacgagagg aaggttaaca agtaggggtc ctttggtttg agatcctgga gcaaattaag 9300 gaagagccac taaggctaat ggaattacac tggatcctgt gacagacact tcaggcttca 9360 tgggtcacat ggtctgtttc tgctcctttc tgccctggtt ggtgtgggtt gtggtgttag 9420 agaaatctca ggtgggagat ctggggctgg gacattgtgt tggaggacag atttgcttca 9480 ataactttta agtgtatatc ttttcctctt tttcccagga cactctggac ttcagccaac 9540 aggtaatacc ttttaatcct cttttagaaa cagacacagt ttccctagtg agaggtgaag 9600 ccagctggac ttctgggtgg ggtggggact tggagaactt ttcttacaag aggttttttt 9660 ttgttttttt tttttttttt ttttttgaga cggagtctcg ctctgtcgcc caggctggag 9720 tgcagtggcg ggatctcggc tcactgcaag ctccgcctcc cgggttcacg ccattctcct 9780 gcctcagcct cccaagtagc tgggactaca ggcgcccgcc actacgcccg gctaattttt 9840 tgtattttta gtagagacgg ggtttcaccg ttttagccag gatggtctcg atctcctgac 9900 ctcgtgatcc gcccgcctcg gcctcccaaa gtgctgggat tacaggcgtg agccaccgcg 9960 cccggcctac aagaggtttc taaatgcacc aatcagtgct ttgtaaaaac acaccaatag 10020 gttctctgtg gctagctgga tgtttgtaaa atggaccaat tcgcactctg taaaatagac 10080 caatcagcac tctttaaaat ggaccaatca gcacttttaa aatgggccaa tcaccactct 10140 ttaaaatgga ccaatcagca ctctttaaaa tggaccaatc tgcaggacat gggcagggac 10200 aaatacagga ataaaagctg gccaccccaa ccagcagtgg caacccactc aggtcctctt 10260 ccctgctgtg gaagttttgt tcttttgatc ttcacaataa atcttgctgc tgcccactct 10320 ttggatccct gccgccttta agagctgtaa cactcactgt gaaggtctgc aggaagtcag 10380 cgagaccaca aacccaccgg aaggaacaaa ctcaggacac accagaatga tggtagaggt 10440 gataaggcat gagacagaaa taataggaaa gactttggat ccaaatttct gatcaggcaa 10500 tttacaccaa aattcctcct ctccacttag aaaaggtgtg ctctgcggga ctattggctc 10560 aggggagact caggaacttc tttttcttct tcctgcagtg ctctcatctg agcccttgaa 10620 agaggggaaa agaaactgtt agtagagcca ggttgaaaac aacactctcc tctgtctttt 10680 gcaggattcc tgagctgaaa tgcagatgac cacattcaag gaagaacttt ctgccccggc 10740 tttgcaggat gaaaagcttt cctgcttggc agttattctt ccacaagaga gggctttctc 10800 aggacctggt tgctactggt tcggcaactg cagaaaatgt cctcccttgt ggcttcctca 10860 gctcctgccc ttggcctgaa gtcccagcat tgatggca 10898 //