Dbfetch
ID OU943344; SV 1; linear; genomic DNA; STD; HUM; 7090 BP. XX AC OU943344; XX PR Project:PRJEB42469; XX DT 01-NOV-2021 (Rel. 144, Created) DT 01-NOV-2021 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-DQB1 gene for MHC class II antigen, allele DE HLA-DQB1*03:03:02:02 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Turner R T.; RT ; RL Submitted (29-OCT-2021) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, The Royal Free Hospital, Pond Street, RL London, NW3 2QU, United Kingdom XX DR MD5; 841b18950e88c411dac22580f3750b11. XX FH Key Location/Qualifiers FH FT source 1..7090 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="DKB" FT /db_xref="taxon:9606" FT CDS join(431..539,1984..2253,4784..5065,5581..5691,6174..6197, FT 6808..6821) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAH0080805.1" FT /translation="MSWKKALRIPGGLRVATVTLMLAMLSTPVAEGRDSPEDFVYQFKG FT MCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPLGPPDAEYWNSQKEVLERTR FT AELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW FT FRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRA FT QSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGPQGPPPAGLLH" FT exon 431..539 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=1 FT intron 540..1983 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=1 FT exon 1984..2253 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=2 FT intron 2254..4783 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=2 FT exon 4784..5065 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=3 FT intron 5066..5580 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=3 FT exon 5581..5691 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=4 FT intron 5692..6173 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=4 FT exon 6174..6197 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=5 FT intron 6198..6807 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=5 FT exon 6808..6821 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:03:02:02" FT /number=6 XX SQ Sequence 7090 BP; 1793 A; 1639 C; 1710 G; 1948 T; 0 other; gaaatatgat ccccacttaa tttgccctac tgaaagaatc ccaagtataa aaacaaccag 60 tttttaatca atattacaaa gatgtttact gttgaatcgc atttttcttt ggcttcttaa 120 aatcccttag gcattcaatc ttcagctctt ctataattga gaggaagttt tcacctcaaa 180 tgttcatcca gtgcaatttg aagacgtcac agtgccaggg actggattga gaaccttcac 240 aaaaaaaaaa tgtctgccta gagacagatt aggtccttca gctccagtgc tgattggttc 300 ctttccaaag gaccatccaa tcctgccacg cagggaaaca tccacaggtt tttattcttt 360 ctgccaggta catcagatcc atcaggtcca agctgtgttg actaccacta cttttccctt 420 cgtctcaatt atgtcttgga agaaggcttt gcggatccct ggaggccttc gggtagcaac 480 tgtgaccttg atgctggcga tgctgagcac cccggtggct gagggcagag actctcccgg 540 taagtgcagg gccactgctc tccagagccg ccactctggg aacaggctct ccttgggctg 600 gggtaggggg atggtgatct ccatgatctc ggacacaatc tttcatcaac atttcctctc 660 tttggggaaa gagaacgatg ttgcattccc atttatcttt tagtgatgag gtgagcacag 720 tcggatcccc atcctacagg cttaagcctg gaagagaagg agagaggaga ggaaagagga 780 gacaaagtgt acatttacta ccagtgacag gacaaagtga gcatggggtt atttttgaag 840 atacgaattt ctccagagac acagcaggat ttgtcattta ggcgtgcccc aagactttgc 900 ctggactaaa tattatggga tcctgcattg ggaaatgtaa ggcagcaatg gtgtctgtag 960 tctccgtatt tgaggaaaag ttgtctgtat tcctgactga ctggaacgtt tgtggaggca 1020 aaatcttggt actgaaggaa gctgactgga tgaccacaga cagggagtct tcaggtttca 1080 ctgatttatg ggcaaatggt gacttgagtg ggattcagag acccgagttg gtggactgaa 1140 tttagcagaa aggaggatgt aaagaaggga aataacatat attgtgaaac cactcatttc 1200 agacacagca caatacttta cataaattct ctctcactcc ttctaacatc ctgtgtgtag 1260 atatcatgat tttcttttac acaattatac ttgtgatatg gatattctgt tacatacctg 1320 ccctagctgg tgactgccac agcttaattg gaatctagtt tatcaaattc aaaagcttgt 1380 gctctttcca tgaataaatg tttctttcta ggactcggag gtgtaggtcc tttctaacat 1440 aaaagtgagt gaacctcaca tggcattcgg aagggtaaat ccaggcatgg gaagggaggt 1500 attttaccga gggaccaaga gaatacgcat atcagaacga ggacaggctt aatttctgga 1560 cccgtctcat cattcccttg aactcacagg tttatgtgga taattttatc tctgaggttt 1620 ccaggagctc aatggaaaat gggatttcat gcgagagcgc cctgattccc tctaagtgca 1680 gaggtctatg taaaatcagc ccgactgcct cttccctcgg ttcacaggct ccggcaggga 1740 cagggctttc cgccctttcc tgcctgcagg aaggcggatt cccgaagccc ccagagaggg 1800 cgggcagggc tgggcagagc cgccgggcgg atcacaagtc tggagcgcca ggcacgggcg 1860 ggcgggaact ggaggtcgcg cgggcggttc cacagctccg ggccgggtca gggcggcggc 1920 tgcgggggcg gccgggctgg ggccgggccg gggcctgact gaccggccgg tgattccccg 1980 cagaggattt cgtgtaccag tttaagggca tgtgctactt caccaacggg acggagcgcg 2040 tgcgtcttgt gaccagatac atctataacc gagaggagta cgcacgcttc gacagcgacg 2100 tgggggtgta tcgggcggtg acgccgctgg ggccgcctga cgccgagtac tggaacagcc 2160 agaaggaagt cctggagagg acccgggcgg agttggacac ggtgtgcaga cacaactacc 2220 agttggagct ccgcacgacc ttgcagcggc gaggtgagcg tcgtcgcccg tctgcgaggc 2280 ccatccttgg caggggccca gagtctctgc gccaggaggg gcgaaggggg cgcggcctct 2340 ggaacctgag ccttgttcgt tccaccccgg ctgacaggag gaggcggtgg gggtgctggg 2400 ggctggtgca tcggaggggc agggacctag ggcagagcag gggaacaggc agagttggtc 2460 aagctgccta gtttcgcccc atcctccccg tccgtcggcc tcgccctctg ctctgcacgt 2520 tcttgcctcg tgccttatgc gtttgcctcc tcgtgcctta cctttactaa gcagttctct 2580 ctgcccccaa tttccgccct cttcccctgc ccgcccgccc ggctagcact gccgcacccg 2640 gcaaggtcca cctacacagc tcatgcagtg ggaagcttca gacttggcct gatggagtta 2700 gggctgcccc acaactgcgc gcagggcatc cagcaattac agttgtcaaa taagatattt 2760 tgacttttga cttcaaatta ttattcatcg taattctgtt ttcttaaatg gctctcattc 2820 atggcggagc tctttgagat gagagtgttt taatcattgc atgcctggta tctgacacat 2880 tgactggcat gtggtatgag ctcaatgatc ttctgttaaa ttaatgaata aatgtgctca 2940 gctgccaatc cacttaggct caagggaaag cagaggataa atagagcctt aaaaatggac 3000 ttttattaat tattttctgt cattttgctt aattctttaa agtaaactct tattgacttg 3060 gatcttaata gagtttgtga atacaaagtc tgaggaaaaa agtgtttgct aaaaataaaa 3120 acaacacttg aatgatgttt gtaaggcagt tttaatttct tagaaaagct gaacaaatgg 3180 cacaatgcaa agagcagaag ttttggaata aatagattga agcaattaaa ttattggata 3240 aaaatagttt caggttgctt ttggcttagg ttctcccctc cccccatcac tatccacttc 3300 aggaataaac attctgaaag tcaattttac ccatttagtg agcacttatt tctagacagt 3360 taccttatca aataccgtct atgttacgtc atttaatctc acagttgcct gtgcattaga 3420 gattagcatc accactttat atatcctaat attagtacat gacaaacact ttaagtaatc 3480 agcccacaag tactcaccaa gaccttaagc ctcccaaagt acacaatatt ctttatgttc 3540 ttcactacac atctatagag tcaaagggac ataaagcctt gttaaagcca gttttgacta 3600 gaagcagcaa tgagtctctt cctgtttgat ctccatgtta atgggacaaa atgatacttt 3660 caaggcattg aaaatttatg attaatcaat ccctagtctg actccagtgt tacctatgca 3720 gattcacaaa acttttagtt tactttaaac tcccttgcct tcttttgact cacatcgtag 3780 tgccagcaag tacttacatt tttgctattt tggttctatt tccataaaat ttattttatc 3840 atcttttctc ataagtttgt gccctctatt ttactcccag tctgtgtaag atgaacaaat 3900 cttataaagc cacatagctg actgtgattt caggtggact ccaggaagga gaaccaaaga 3960 aaagttcaag tccaagcaga aaccgtgatt ccttccggat gatggctcaa gagtgccttt 4020 taattggggt gcaacctgct gacctcagca aatctcagct atatttatat gttcacatta 4080 caggctcatt aacctaggct gatctctgca aggatctcag aatattttct acagataaca 4140 tacatgataa tatctgattt caggacaaaa aagtaattct caatagcaag ggaatggagt 4200 agggtagaca gctagtaatt aaactcactt gtatgttaaa aataaattaa ggaaaaaaag 4260 aaaatgagag aacatattac taaataaaga aagcatacat taaatattta ctatagtttc 4320 acactaagag aataaaggaa atgcaataaa gtggcctgaa agataaagga tgagatgtgt 4380 aaagagacag ggaaagatgt gtcatttttt tactatgagc agcagtctga gaagataaag 4440 gaatcgagtt atgggcaaac atgatgtttg atcagtgtta tttgttttga aggcctgcct 4500 acttttgttt caaatattac agacttttga aatcacattc tttttgtttt ttgctgtctg 4560 ttactagatc gcacattctg taaaggcagg gaccatggta tgttgtttat ctttggattc 4620 tcagtgattg tcatatttat atttgttgaa tgaatcttaa tccaagactt ggactccagg 4680 tatctttcca ctctggttcc aaggagggac cattcccaat ggtagacgtg ctgtgtggtc 4740 tcacatctca ctcctgtctt ttcctgtctg ttactgccct cagtggagcc cacagtgacc 4800 atctccccat ccaggacaga ggccctcaac caccacaacc tgctggtctg ctcagtgaca 4860 gatttctatc cagcccagat caaagtccgg tggtttcgga atgaccagga ggagacaact 4920 ggcgttgtgt ccacccccct tattaggaac ggtgactgga ccttccagat cctggtgatg 4980 ctggaaatga ctccccagcg tggagacgtc tacacctgcc acgtggagca ccccagcctc 5040 cagaacccca tcatcgtgga gtggcgtaag gggatattga gtttctgtta ctatgggccc 5100 cacaagacaa agggcagagc tccttctgac ccattccttc ccatctctta tccctgatgt 5160 cactactgag ctggggatca caggagacta gagcacctct tgctccatgg caagtgcatc 5220 agaagaatcc tgatctcatc acctttccag atgctaggga aattattcta cgtactgttt 5280 ctccagatcc cagtcctgat agctcggagg gacttattat tagggctggt gactgggatc 5340 ttagggttta aggtatggat gagttcctga ggagtggaga tctgcttccc cgctctctca 5400 cctactcact gtaccgaagg acctattggc tggctttccc ctcccttagg ggtggtctga 5460 atggaggact aggttccttt gacactttca cctcctgcat ctcagactgg acttcagctc 5520 ctcagcaggg atgctatggg gtgtagggac aaacactgac actcaggctc tgcttcttag 5580 gggctcagtc tgaatctgcc cagagcaaga tgctgagtgg cattggaggc ttcgtgctgg 5640 ggctgatctt cctcgggctg ggccttatta tccatcacag gagtcagaaa ggtgaggaac 5700 cccaagggaa aaggggaaga tgggctgtga cccagaccct ctgttcaggg aggtcctgtc 5760 tctagatgtg gctctttcct cctgaccctg agaggaagaa aactgagctg gaggtgggag 5820 gagacaggac aagattggag gaggcactgg aatctgattt tactagttga aaggtagccc 5880 tgtcacacag gtgactgata gagcttattc caggatgtac ttaccattca tcgtctcatt 5940 ggctcctttc caaaagcttc ctccattaag agggtcagag ccttggcctc cttgccttct 6000 agtgacaatt ttctttgttt taggggattt taaattaggg tacttaaggc cttgaagaac 6060 atgagtggta agagaatata actctaatta agtcacatgt gtcattttcc tttggggtga 6120 gagagtggct gtttgtgtaa tgagaccttt ctctgcataa cttccttttg taagacctca 6180 agggcctcca ccagcaggtg atatttcagc catgagccag tgtggggggg cacaggtgta 6240 agagggaaga gcatgagctg aatgcacctg accacaatgg tctctgttca tggtatattt 6300 gctgctatga ggatcaagac ttagggtcga agtttgccag tttctaggaa tctccagagg 6360 ttgttcccca gaaccaagcc ttaactttgg tggtatcttc ttgtgaaatg tgaagccaga 6420 accacagctt aaatgttaga caagaggatg atgcccactt tgtgccacat gttggtggct 6480 actgcctgta ggcattttcc agtgactgaa agaggctgct agtggtaggg atgaggtatc 6540 atccaatttt ctaaaaagat tgaacccttc atattcccca gaagagtaac agctgttcca 6600 ccacttccca cacatctgca tcaagctgaa gttctgtgtc ctcatgagct gatttcacct 6660 ttgcacagat cttgcgggag gtgacgataa tacattctgg acctcagctt tctctgtctg 6720 aagctgcagg gggcccctga ggggtggggg agattgcagg cccaccagcg taccctgtgc 6780 tgatcatccc tcttctctct tcttcagggc tcctgcactg actcctgaga ctattttaac 6840 tgggattggt tatcactttt ctgtaacgcc tgcttgtccc tgcccagaat tcccagctgc 6900 ctgtgtcagc ctgtcccccg agatcagagt cctacagtgg ctgtcacgca gccaccaggt 6960 catctccttt catccccacc tcgaggctga tggctgtgac cctgcttcct gcactgaccc 7020 agagcctctg cctgtgcacg gccagctgcg tctactgagg tcccaagggg tttctgtttc 7080 tattctctcc 7090 //