Dbfetch
ID OU928458; SV 1; linear; genomic DNA; STD; HUM; 3888 BP.
XX
AC OU928458;
XX
PR Project:PRJEB48185;
XX
DT 14-MAR-2023 (Rel. 144, Created)
DT 15-MAR-2023 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-C gene for MHC class I antigen, cell line
DE DKMS-LSL_ID19324230_C_1, allele HLA-C*02:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (27-OCT-2021) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 16b61385a44ea2d22e8bb21aeaad4379.
XX
FH Key Location/Qualifiers
FH
FT source 1..3888
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID19324230_C_1"
FT /db_xref="taxon:9606"
FT exon 1..568
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=1
FT CDS join(496..568,699..968,1214..1489,2077..2352,2474..2593,
FT 3033..3065,3173..3220,3384..3388)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /product="MHC class I antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAH0060381.1"
FT /translation="MRVMAPRTLLLLLSGALALTETWACSHSMRYFYTAVSRPSRGEPH
FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK
FT LRGYYNQSEAGSHTLQRMFGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKWEAAREAEQWRAYLEGECVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE
FT ATLRCWALGFYPTEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
FT intron 569..698
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=1
FT exon 699..968
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=2
FT intron 969..1213
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=2
FT exon 1214..1489
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=3
FT intron 1490..2076
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=3
FT exon 2077..2352
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=4
FT intron 2353..2473
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=4
FT exon 2474..2593
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=5
FT intron 2594..3032
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=5
FT exon 3033..3065
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=6
FT intron 3066..3172
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=6
FT exon 3173..3220
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=7
FT intron 3221..3383
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=7
FT exon 3384..3888
FT /gene="HLA-C"
FT /allele="HLA-C*02:new"
FT /number=8
XX
SQ Sequence 3888 BP; 762 A; 1088 C; 1202 G; 836 T; 0 other;
ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60
agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120
gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180
tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc 240
ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300
ggattctcca ctcccctgag tttcacttct tctcccaacc tgcgacgggt ccttcttcct 360
gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 420
aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcggattc 480
tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcctcctgct gctctcggga 540
gccctggccc tgaccgagac ctgggcctgt gagtgcgggg ttgggaggga aacggcctct 600
gcggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660
ggagggtcgg gcgggtctca gcccctcctc tcccccaggc tcccactcca tgaggtattt 720
ctacaccgct gtgtcccggc ccagccgcgg agagccccac ttcatcgcag tgggctacgt 780
ggacgacacg cagttcgtgc ggttcgacag cgacgccgcg agtccaagag gggagccgcg 840
ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900
gcgccaggca cagactgacc gagtgaacct gcggaaactg cgcggctact acaaccagag 960
cgaggccggt gagtgacccc ggcccggggc gcaggtcacg acccctcccc atcccccacg 1020
gacggcccgg gtcgccccga gtctccgggt ctgagatcca ccccgaggct gcggaacccg 1080
cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140
gccaaaatcc ccgcgggttg gtcggggctg gggcggggct cgggggacgg gctgaccacg 1200
ggggcggggc cagggtctca caccctccag aggatgtttg gctgcgacct ggggccggac 1260
gggcgcctcc tccgcgggta tgaccagtcc gcctacgacg gcaaggatta catcgccctg 1320
aacgaggacc tgcgctcctg gaccgccgcg gacacagcgg ctcagatcac ccagcgcaag 1380
tgggaggcgg cccgtgaggc ggagcagtgg agagcctacc tggagggcga gtgcgtggag 1440
tggctccgca gatacctgga gaacgggaag gagacgctgc agcgcgcggg taccaggggc 1500
agtggggagc cttccccatc tcctgtagat ctcccgggat ggcctcccac gaggagggga 1560
ggaaaatggg atcagcgcta gaatatcgcc ctcccttgaa tggagaatgg gatgagtttt 1620
cctgagtttc ctctgagggc cccctctgct ctctaggaca attaagggat gaagtccttg 1680
aggaaatgga ggggaagaca gtccctggaa tactgatcag gggtcccctt tgaccacttt 1740
gaccactgca gcagctgtgg tcaggctgct gacctttctc tcaggccttg ttctctgcct 1800
cacgctcaat gtgtttgaag gtttgattcc agcttttctg agtccttcgg cctccactca 1860
ggtcaggacc agaagtcgct gttcctccct cagagactag aactttccaa tgaataggag 1920
attatcccag gtgcctgtgt ccaggctggc gtctgggttc tgtgccccct tccccacccc 1980
aggtgtcctg tccattctca ggatagtcac atgggcgctg ttggagtgtc gcaagagaga 2040
tacaaagtgt ctgaattttc tgactcttcc cgtcagaaca cccaaagaca cacgtgaccc 2100
accatcccgt ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctacccta 2160
cggagatcac actgacctgg cagcgggatg gcgaggacca aactcaggac accgagcttg 2220
tggagaccag gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt 2280
ctggagaaga gcagagatac acgtgccatg tgcagcacga ggggctgccg gagcccctca 2340
ccctgagatg gggtaaggag ggggatgagg ggtcatgtgt cttctcaggg aaagcagaag 2400
tcctggagcc cttcagctgg gtcagggctg aggcttgggg gtcagggccc ctcaccttcc 2460
cctcctttcc cagagccatc ttcccagccc accatcccca tcgtgggcat cgttgctggc 2520
ctggctgtcc tggctgtcct agctgtccta ggagctgtgg tggctgttgt gatgtgtagg 2580
aggaagagct caggtaggga aggggtgagg agtggggtct gggttttctt gtcccactgg 2640
gagtttcaag ccccaggtag aagtgtgccc cacctcgtta ctggaagcac catccacaca 2700
tgggccatcc cagcctggga ccctgtgtgc cagcacttac tctgttgtga agcacatgac 2760
aatgaaggac agatgtatca ccttgatgat tatggtgttg gggtccttga ttccagcatt 2820
catgagtcag gggaaggtcc ctgctaagga cagaccttag gagggcagtt gctccagaac 2880
ccacagctgc tttccccgtg tttcctgatc ctgccctggg tctgcagtca tagttctgga 2940
aacttctctt gggtccaaga ctaggaggtt cccctaagat tgcatggccc tgcctcctcc 3000
ctgtcccctc acagggcatt ttcttcccac aggtggaaaa ggagggagct gctctcaggc 3060
tgcgtgtaag tgatggcggc aggcgtgtgg aggagctcac ccaccccata attcctcttg 3120
tcccacatct cctgcgggct ctgaccaggt cttttttttt gttctacccc agccagcaac 3180
agtgcccagg gctctgatga gtctctcatc gcttgtaaag gtgagattct gggagctgaa 3240
gtggtcgggg gtggggcaga gggaaaaggc ctaggtaatg gggatccttt gatagggacg 3300
tttcgaatgt gtggtgagct gttcagagtg tcatcactta ccatgactga cctgaatttg 3360
ttcatgacta ttgtgttctg tagcctgaga cagctgcctg tgtgggactg agatgcagga 3420
tttcttcaca cctctccttt gtgacttcaa gagcctctgg catctctttc tacaaaggca 3480
tctgaatgtg tctgcgtccc tgttagcata atgtgaggag gtggagagac cagcccaccc 3540
ccgtgtccac cgtgacccct gtccccacac tgacctgtgt tccctccccg atcatctttc 3600
ctgttccaga gaagtgggct ggatgtctcc atctctgtct caactttacg tgtactgagc 3660
tgcaacttct tccctactga aaataagaat ctgaatataa atttgttttc tcaaatattt 3720
gctatgagag gttgatggat taattaaata agtcaattcc tggaagttga gagagcaaat 3780
aaagacctga gaaccttcca gaatccgcat gttcgctgtg ctgagtctgt tgcaggtggg 3840
ggtggggaag gctgtgagga gacgagtgtg gacggggcct gtgcctag 3888
//