Dbfetch
ID OU928431; SV 1; linear; genomic DNA; STD; HUM; 3895 BP. XX AC OU928431; XX PR Project:PRJEB48185; XX DT 14-MAR-2023 (Rel. 144, Created) DT 15-MAR-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-C pseudogene, cell line DKMS-LSL_ID12275928_C_1, null DE allele HLA-C*05:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (27-OCT-2021) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; fe4fccb8c43ab9bcd8a3c005706d40c2. XX FH Key Location/Qualifiers FH FT source 1..3895 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID12275928_C_1" FT /db_xref="taxon:9606" FT exon 1..568 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=1 FT CDS join(496..568,699..968,1215..1492,2080..2355,2477..2596, FT 3036..3068,3176..3223,3388..3392) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /note="MHC class I antigen null allele" FT /pseudogene="allelic" FT intron 569..698 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=1 FT exon 699..968 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=2 FT intron 969..1214 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=2 FT exon 1215..1492 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=3 FT intron 1493..2079 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=3 FT exon 2080..2355 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=4 FT intron 2356..2476 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=4 FT exon 2477..2596 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=5 FT intron 2597..3035 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=5 FT exon 3036..3068 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=6 FT intron 3069..3175 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=6 FT exon 3176..3223 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=7 FT intron 3224..3387 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=7 FT exon 3388..3895 FT /gene="HLA-C" FT /allele="HLA-C*05:new" FT /number=8 XX SQ Sequence 3895 BP; 764 A; 1086 C; 1203 G; 842 T; 0 other; ttattttgct ggatgtagtt taatattacc tgaggtaagg taaggcaaag agtgggaggc 60 agggagtcca gttcagggac ggggattcca ggagaagtga aggggaaggg gctgggcgca 120 gcctgggggt ctctccctgg tttccacaga cagatccttg gccaggactc aggcacacag 180 tgtgacaaag atgcttggtg taggagaaga gggatcagga cgaagtccca ggtcccgggc 240 ggggctctca gggtctcagg ctccaagggc cgtgtctgca ctggggaggc gccgcgttga 300 ggattctcca ctcccctgag tttcacttct tcttccaacc tgcgtcgggt ccttcttcct 360 gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 420 aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcggattc 480 tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 540 gccctggccc tgaccgagac ctgggcctgt gagtgcgagg ttgggaggga aacggcctct 600 gcggagagga gcgaggggcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 660 ggagggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaggtattt 720 ctacaccgcc gtgtcccggc ccggccgcgg agagccccgc ttcatcgcag tgggctacgt 780 ggacgacacg cagttcgtgc agttcgacag cgacgccgcg agtccaagag gggagccgcg 840 ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 900 gcgccaggca cagactgacc gagtgaacct gcggaaactg cgcggctact acaaccagag 960 cgaggccggt gagtgacccc ggcccggggc gcaggtcacg acccctcccc atcccccacg 1020 gacggcccgg gtcgccccga gtctcccggt ctgagatcca ccccgaggct gcggaacccg 1080 cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 1140 gccaaaatcc ccgcgggttg gtcggggctg gggcggggct cgggggacgg ggctgaccac 1200 gggggcgggg ccagggtctc acaccctcca gaggatgtat ggctgcgacc tggggcccga 1260 cgggcgcctc ctccgcgggt ataaccagtt cgcctacgac ggcaaggatt acatcgccct 1320 gaatgaggac ctgcgctcct ggaccgccgc ggacaaggcg gctcagatca cccagcgcaa 1380 gtgggaggcg gcccgtgagg cggagcagcg gagagcctat acctggaggg cacgtgcgtg 1440 gagtggctcc gcagatacct ggagaacggg aagaagacgc tgcagcgcgc gggtaccagg 1500 ggcagtgggg agccttcccc atctcctgta gatctcccgg gatggcctcc cacgaggagg 1560 ggaggaaaat gggatcagcg ctggaatatc gccctccctt gaatggagaa tgggatgagt 1620 tttcctgagt ttcctctgag ggccccctct gctctctagg acaattaagg gatgaagtcc 1680 ttgaggaaat ggaggggaag acagtccctg gaatactgat caggggtccc ctttgaccac 1740 tttgaccact gcagcagctg tggtcaggct gctgaccttt ctctcaggcc ttgttctctg 1800 cctcacgctc aatgtgttta aaggtttgat tccagctttt ctgagtcctt cggcctccac 1860 tcaggtcagg accagaagtc gctgttcctc cctcagagac tagaactttc caatgaatag 1920 gagattatcc caggtgcctg tgtccaggct ggcgtctggg ttctgtgccc ccttccccac 1980 cccaggtgtc ctgtccattc tcaggatggt cacatgggca ctgttggagt gtcgcaagag 2040 agatacaaag tgtctgaatt ttctgactct tcccgtcaga acacccaaag acacacgtga 2100 cccaccatcc cgtctctgac catgaggcca ccctgaggtg ctgggccctg ggcttctacc 2160 ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag gacaccgagc 2220 ttgtggagac caggccagca ggagatggaa ccttccagaa gtgggcagct gtggtggtgc 2280 cttctggaga agagcagaga tacacgtgcc atgtgcagca cgaggggctg ccagagcccc 2340 tcaccctgag atggggtaag gagggggatg aggggtcatg tgtcttctca gggaaagcag 2400 aagtcctgga gcccttcagc cgggtcaggg ctgaggcttg ggggtcaggg cccctcacct 2460 tcccctcctt tcccagggcc atcttcccag cccaccatcc ccatcgtggg catcgttgct 2520 ggcctggctg tcctggctgt cctagctgtc ctaggagctg tgatggctgt tgtgatgtgt 2580 aggaggaaga gctcaggtag ggaaggggtg aggagtgggg tctgggtttt cttgtcccac 2640 tgggagtttc aagccccagg tagaagtgtg ccccacctcg ttactggaag caccatccac 2700 acatgggcca tcccagcctg ggaccctgtg tgctagcact tactctgttg tgaagcacat 2760 gacaatgaag gacagatgta tcaccttgat gattatggtg ttggggtcct tgattccagc 2820 attcatgagt caggggaagg tccctgctaa ggacagacct taggagggca gttgctccag 2880 aacccacagc tgctttcccc gtgtttcctg atcctgccct gggtctgcag tcatagttct 2940 ggaaacttct cttgggtcca agactaggag gttcccctaa gatcgcatgg ccctgcctcc 3000 tccctgtccc ctcacagggc attttcttcc cacaggtgga aaaggaggga gctgctctca 3060 ggctgcgtgt aagtgatggc ggtgggcgtg tggaggagct cacccacccc ataattcctc 3120 ttgtcccaca tctcctgcgg gctctgacca ggtctttttt tttgttctac cccagccagc 3180 aacagtgccc agggctctga tgagtctctc atcgcttgta aaggtgagat tctggggagc 3240 tgaagtggtc gggggtgggg cagagggaaa aggcctaggt aatggggatc ctttgattgg 3300 gacgtttcga atgtgtggtg agctgttcag agtgtcatca cttaccatga ctgacctgaa 3360 tttgttcatg actattgtgt tctgtagcct gagacagctg cctgtgtggg actgagatgc 3420 aggatttctt cacacctttc ctttgtgact tcaagagcct ctggcatctc tttctgcaaa 3480 ggcatctgaa tgtgtctgcg ttcctgttag cataatgtga ggaggtggag agacagccca 3540 cccccgtgtc caccgtgacc cctgtcccca cactgacctg tgttccctcc ccgatcatct 3600 ttcctgttcc agagaagtgg gctggatgtc tccatctctg tctcaacttt acgtgtactg 3660 agctgcaact tcttacttcc ctactgaaaa taagaatctg aatataaatt tgttttctca 3720 aatatttgct atgagaggtt gatggattaa ttaaataagt caattcctgg aagttgagag 3780 agcaaataaa gacctgagaa ccttccagaa tccgcatgtt cgctgtgctg agtctgttgc 3840 aggtgggggt ggggaaggct gtgaggagac gagtgtggac ggggcctgtg cctag 3895 //