Dbfetch
ID OU837005; SV 1; linear; genomic DNA; STD; HUM; 7444 BP. XX AC OU837005; XX PR Project:PRJEB41853; XX DT 21-OCT-2021 (Rel. 144, Created) DT 21-OCT-2021 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-DQB1 gene for MHC class II antigen, allele DE HLA-DQB1*02:01:01:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Cambridge C.; RT ; RL Submitted (14-OCT-2021) to the INSDC. RL Anthony Nolan Research Institute, 77C Fleet Road, London, NW3 2QG, United RL Kingdom XX DR MD5; 6dc010fc3dd1deb605dd5b50384f4e5a. XX FH Key Location/Qualifiers FH FT source 1..7444 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300741" FT /db_xref="taxon:9606" FT CDS join(426..534,1973..2242,5132..5413,5930..6040,6526..6549, FT 7161..7174) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAG9639435.1" FT /translation="MSWKKALRIPGGLRAATVTLMLSMLSTPVAEGRDSPEDFVYQFKG FT MCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKR FT AAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW FT FRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA FT QSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGPQGPPPAGLLH" FT exon 426..534 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=1 FT intron 535..1972 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=1 FT exon 1973..2242 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=2 FT intron 2243..5131 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=2 FT exon 5132..5413 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=3 FT intron 5414..5929 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=3 FT exon 5930..6040 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=4 FT intron 6041..6525 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=4 FT exon 6526..6549 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=5 FT intron 6550..7160 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=5 FT exon 7161..7174 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:01:01:new" FT /number=6 XX SQ Sequence 7444 BP; 1875 A; 1739 C; 1778 G; 2052 T; 0 other; gaaatatgat ccccacttaa tttgccctat tgaaagaatc ccaagtataa gaacaactgg 60 tttttaatca atattacaaa gatgtttact gttgaatcgc atttttcttt ggcttcttaa 120 aatcccttag gcattcaatc ttcagctctt ccataattga gaggaaattt tcacctcaaa 180 tgttcatcca gtgcaattga aagacgtcac agtgccaggc actggattca gaaccttcac 240 aaaaaaaaaa tctgcccaga gacagatgag gtccttcagc tccagtgctg attggttcct 300 ttccaaggga ccatccaatc ctaccacgca tggaaacatc cacagatttt tattctttct 360 gccaggtaca tcagatccat caggtccgag ctgtgttgac taccactttt cccttcgtct 420 caattatgtc ttggaaaaag gctttgcgga tccccggagg ccttcgggca gcaactgtga 480 ccttgatgct gtcgatgctg agcaccccag tggctgaggg cagagactct cccggtaagt 540 gcagggcagc tgctctccag agccgctact ctgggaacag gctctccttg ggctggggta 600 cggggatggt gatctccata atctcggaca caatctttta tcaacatttc ctctgttttg 660 ggaaagagag ctatgttgca tttccattta tcttttaatg atgaagtgag gacaatccaa 720 tcccatccta caggcttaag cctggaagag gaggagagag gagagaaaag aggagacaaa 780 gtgttcattt actaccagtg ataggacaaa gtgagcatgg ggttattttt gaagatatga 840 atttctccaa agacacagca ggatttgcca tttaggcgtg tcccaagact tgcctggact 900 aaatattatg atttcctgca ttgggaaatg caaggcagca atggtgtctg tagtctccgt 960 atttggggaa aagttgtctg tattcctgac ccagtggagc gtttgtggag gcaaaatctt 1020 ggtactgagg gaagctgact ggctgaccac agaaagagag ccttcaggtt tcactgattt 1080 atgggcaaat ggtgacctga gtgggattca gatacccgag ttgatgatgg actaaattta 1140 gtagaaagga ggatgtaaag aagggaaata acacatactg tgaaaccact catttcagac 1200 acagaacaat actttacata aattctctct cactccttct aacatcctgt gtgtagatat 1260 catgattttc ttttacacaa ttatacttgt gatatggata ttctgttaca taaactgccc 1320 gggctggtga ctgccacagt ttaatgggaa tctagtttat caaattcaaa agcttgtgct 1380 ctttcggtga ataaatgttt ctttctagga ctcagagatc taggactccc ttctttctaa 1440 cacagacgtg agtgaacctc acagggcact tgggagggta aatccaggca tgggaaggaa 1500 ggtattttac ccagggacca agagaatagg cgtatcggaa gaggacaggt ttaattcctg 1560 gacctgtctc gtcattccct tgaactgtca ggtttatgtg gataacttta tctctgaggt 1620 acccaggagc tccatggaaa atgagatttc atgcgagaac gccctgatcc ctctaagtgc 1680 agaggtccat gtaaaatcag cccgactgcc tcttcacttg gttcacaggc cgagacaggg 1740 acagggcttt cctccctttc ctgcctgtag gaaggcggat tcccgaagac ccccgagagg 1800 gcgggcaggg ctgggcagag ccgccgggag gatcccaggt ctgcagcgcg aggcacgggc 1860 cggcgggaac ttgtggtcgc gcgggctgtt ccacagctcc gggccgggtc agggtggcgg 1920 ctgcgggggc ggacgggctg ggccgcactg actggccggt gattcctcgc agaggatttc 1980 gtgtaccagt ttaagggcat gtgctacttc accaacggga cagagcgcgt gcgtcttgtg 2040 agcagaagca tctataaccg agaagagatc gtgcgcttcg acagcgacgt gggggagttc 2100 cgggcggtga cgctgctggg gctgcctgcc gccgagtact ggaacagcca gaaggacatc 2160 ctggagagga aacgggcggc ggtggacagg gtgtgcagac acaactacca gttggagctc 2220 cgcacgacct tgcagcggcg aggtgagcgg cgtcgcccct ctgcgaggcc cacccttggc 2280 cccaagtctc tgcgccagga ggggcgaagg gtcgtggcct ctggaacctg agccccgttt 2340 gttccacccc agaggacagg aggcagcggc gagagtggtg ggggcaggtg catcggaggt 2400 gcggggacct agggcagagc agggggacag gcagagttgg ccaggctgcc tagtgtcgcc 2460 ccagcctacc cgttcgtcgg ccttgtcctc tgctctgcat gttcttgcct cgtgccttat 2520 gcatttgcct ccttttgcct tacctttgct aagcagctct ctctgctcag aatgcccgcc 2580 ctcttcccct gcccgcccgc ccgccccact agcactgccc cacccagcaa ggcccacgtg 2640 cacagctctt gcagcaggaa gcttcaggct tagcctggtg gagttagggc tgttccacaa 2700 ctgcgcgcag gacattcagc aattacagtt gtgaaataag atattttaac ttttggcttc 2760 aaatcattat tcatcgtaat tctgttttct taaatggctc tcattcatgg cagagatctt 2820 tgaggtgagg gtgttttaat cattgcatgc ctagtacctg acacattgac tggtatgtgg 2880 tgtgagctca atgatcttct gttaaattaa tgaataaatg tactcagctg cccatccact 2940 taggctcaag aaaaaaaaag aggtaaacag agccttaaaa atggacttta ttaattattt 3000 tctataattt tgcttaatgc tttaaagtaa actcttattg acttggatct taatagagtt 3060 tgtgaataca aaatctgagg aaaaaagttt ttgctaaaaa taaaaacaac gcttgaaaga 3120 tattgtaagg cagtttaaat ttcttttctt ttcttttctt tttttttttg agacggattc 3180 tcactctgtc gcccaggccg gagtgcagtg gcgcgatctc ggctcactgc aagctccgcc 3240 tcccgggttc acgccattct cctgcctcag cctcctgagt aggtgggatt acaggcgcgt 3300 gccaccacgc ccggctaatt tttttgtatt tttagtagag gcggggtttc accgtgttag 3360 ccaggatggt ctggatctcc tgacctcatg atccgcccgc ctcggcctcc caaagtgctg 3420 ggattacagg tgtgagccac agtgcccggc cggcactttt aatttcttag aaaagctgaa 3480 caaatggcac aatgcaaaga gcaaaagttt tggaataaat agattgaagc cattaaatta 3540 ttggataaaa atagtttcgg gttgcttttg gcctaggttc tcccctcccc ccatgactat 3600 ccacttcagg aataaacatt ctgaaagtca attttaccca tttagtgagc atttatttct 3660 agacagttgc cttatcaaat accatctatg ttacgtcatt taatctcaca gttacttgtg 3720 catcagagat tagcatcacc actttatata ttggtacatg ataaacactt tattggtcat 3780 ggatggggag atggtcactg taggctaata ttggtacatg ataaacactt taagtaatca 3840 gcccataatt gctcaccaag accttaagcc tcccaaagta cacaacattc tttgtgttct 3900 tcactacaca tccatagagt ctaagggacg taaagcctcg ttaaagccag ttttgaccag 3960 aagcagcaat gagtctattc ctgtgtgttt tccatgttaa tgggacaaaa tgatactttc 4020 aaggcattga aaattcatga ttaatcaatc cctagtctga ccccagtgtt atctatgcag 4080 gtttgcaaaa cctttagttt acttaatact cccttgcctt cttttgattc acatcctaat 4140 gccagcaaat acttatgttt ttgctatttc agttccattt ccataaaatt tattttatca 4200 tcttttctca taaatttatg ccctctattt ttactcccaa tctgtttaag atgaacaaat 4260 cttataaggc cacatagctg actgttattt ctgttggact ccaggaagga gaacctaaag 4320 aaaagttcaa gtccaagcag aaaccgtgat ttcttccaga tgatggctca tgagtgccat 4380 ttaattgggg tgccacctgg tgacctcagc aaatcccagc tatatttatg tgttcacatt 4440 acaggatcat taacccagac cgaccactgc acagatctca gaatattttc tatggagaac 4500 atacataata atgcctgatt tcagaagaag aaagtaattc tcaatagcaa ggggatggag 4560 tagggtagac agctgtaatt aaactcactt gtgtgataaa aagaaattaa ggaaaaaaga 4620 aaatgagaga acatattact aaataaagaa agcatacatt aaatatttac tatagtttca 4680 cactaagaga ataaaggaaa tgcaataaag tggcctgaaa ggtaaaggat gagatgtgta 4740 aaggggtgta gtatttttac tatgagcagc aatctgagaa gataaaggaa tcgagttacg 4800 ggcaaacatg atgtttgatc agtgttattt gttttcaagg cctgcctaaa tttttttcaa 4860 atattacaaa cttttgaaat aacattcttt ttgttttttg ctgtctgtta ctaggttgca 4920 cattttataa aggcagggac catggtatgt tgtttgtctt tggattctca gtgattgtta 4980 tatttatatt tgttgaagga accttaatcc aagacttgga ctccaagtat ctttccactc 5040 tggttccaag gagggacctt cctcacagca ggcatgctgt gtggtctcac atctcactcc 5100 tatatctttc cctgtctgtt actgccctca gtggagccca cagtgaccat ctccccatcc 5160 aggacagagg ccctcaacca ccacaacctg ctggtctgct cggtgacaga tttctatcca 5220 gcccagatca aagtccggtg gtttcggaat gaccaggagg agacagctgg cgttgtgtcc 5280 acccccctta ttaggaatgg tgactggacc ttccagatcc tggtgatgct ggaaatgact 5340 ccccagcgtg gagacgtcta cacctgccac gtggagcacc ccagcctcca gagccccatc 5400 accgtggagt ggcgtaaggg gatattgagt ttctgttact gtgggcccca caagacaaag 5460 gacagagctc cttctgaccc atcccttccc atctcttatc cctgatgtca ctgctgagct 5520 gggaatcaca ggagactaga gcacctctag ttccatggcg agtgcatcag aagaatcctg 5580 atctcatcac ctttccagat gctagggaaa ttactctaca tactgttgct ctggatccca 5640 gtcctgattg ctctgaggaa ctgattatta gggctggtga ctgggatctt agggtctaag 5700 tttatggatg agttcctgag gagtggagat ctgcttcccc actctgtcac ctactcactg 5760 tatccaagga cctattggct ggcctttccc tcccttaggg gtggtctgaa tggagaacta 5820 ggttcctttg atgccttcac ctcctgcatc tcagactgga cttcagctcc tcatcaggga 5880 aactatgggg tatggggaca aacactgaca ctcaggctct gcttctcagg ggctcaatct 5940 gaatctgccc agagcaagat gctgagtggc attggaggct tcgtgctggg gctgatcttc 6000 ctcgggctgg gccttatcat ccatcacagg agtcagaaag gtgaggaacc ccaggggaaa 6060 aggggaagat ggcctgtgac ccagaccctc tgttcagaga ggtcctgtct ctagatgtag 6120 ctctttcctc ctgaccctga gaggaagaaa gctgagctgg aagtggaagg agacaggaca 6180 aggttggagg aggcattgga atctgatttt actagctgaa gggtagccct gtcacagagc 6240 tgactgatag agcttattcc agggcatcct taccattcat cattgtctca ctggctcctt 6300 tccaaaaact tcctccatta agagggtcag agcctcggcc tccttgcctt ctagtgacaa 6360 tttcctttat tttaggggat tttaaattag ggtgcttaag gacttgaaga acatgaatgg 6420 gaagagaata taactctaat taagtcacat gtgtcatttt cctttggggt gagagagtgg 6480 ctgttcatgt aatgagacct ttctctgcat aacttccttt tgtaagacct caagggcctc 6540 caccagcagg taatatttca gccgtgatcc agtgtgggga gggcacaggt gtaagaggga 6600 agagcatgag ctgagtgtac ctgacagtag tggtctctgt tcatggtata tttgctgcta 6660 tgaggatcaa gacttagggg tgaagtttgc cagtttctag gaatctccag aggttgttcc 6720 ccagaaccaa gccttaactt tggtggtatc ttcctgttaa atgtggagcc agaaccacgg 6780 cttaaatgtt agacactagg atgatgccca ctttgtgcca catgatggtg gctactgcct 6840 gtaggcattt tccagtgact gaaagaggct gctagtggta gggatgaggt atcatccaat 6900 ttcctaaaaa gattgaaccc ttcatattca ccagaagagt aacagctgtt cccccacctc 6960 ccacacatct gcatcaagct gaagttctgt gtcttcatga gctgatttca cctttgcaca 7020 gatcttgggg gaggtgatga caatacactc tggacctcag ctttgtctgt ctgaagctgc 7080 aggaggcccc tgaggggtgg ggaagatggc aggcccacca gcgtaccctg tgctgatcat 7140 ccctcttctc tcttcttcag ggctcctgca ctgactcctg agactatttt aactgggatt 7200 ggttatcact tttctgtaac gcctgcttgt ccctgcccag aattcccagc tgtctgtgtc 7260 agcctgtccc cctgagatca gagtcctaca gtggctgtca cgcagccacc aggtcatctc 7320 ctttcatccc caccttgagg cggatggctg tgaccctact tcctgcactg acccacagcc 7380 tctgcctgtg cacggccagc tgcatctact caggccccaa ggggtttctg tttctattct 7440 ctcc 7444 //