Dbfetch
ID OU413143; SV 1; linear; genomic DNA; STD; HUM; 7480 BP.
XX
AC OU413143;
XX
PR Project:PRJEB46222;
XX
DT 14-JUN-2023 (Rel. 144, Created)
DT 15-JUN-2023 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens, HLA-DQB1 gene for MHC class II antigen, cell line
DE DKMS-LSL_ID19598398_DQB1_1, allele HLA-DQB1*02:new
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.;
RT ;
RL Submitted (14-JUL-2021) to the INSDC.
RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2,
RL Saxony, 01069 Dresden, Germany
XX
DR MD5; 160024d87291351eb5906538f9e683c1.
XX
FH Key Location/Qualifiers
FH
FT source 1..7480
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /cell_line="DKMS-LSL_ID19598398_DQB1_1"
FT /db_xref="taxon:9606"
FT exon 1..634
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=1
FT CDS join(526..634,2073..2342,5232..5513,6030..6140,7261..7274)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAG8857746.1"
FT /translation="MSWKKALRIPGGLRAATVTLMLSMLSTPVAEGRDSPEDFVYQFKG
FT MCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKR
FT AAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNQHNLLVCSVTDFYPAQIKVRW
FT FRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA
FT QSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGLLH"
FT intron 635..2072
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=1
FT exon 2073..2342
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=2
FT intron 2343..5231
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=2
FT exon 5232..5513
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=3
FT intron 5514..6029
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=3
FT exon 6030..6140
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=4
FT intron 6141..6625
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=4
FT exon 6626..6649
FT /pseudo
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=5
FT intron 6650..7260
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=5
FT exon 7261..7480
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*02:new"
FT /number=6
XX
SQ Sequence 7480 BP; 1896 A; 1740 C; 1780 G; 2064 T; 0 other;
ttctaagaac tttgctcttt tcaccaaaac ttaaggctcc tcagggtgtg tctaagacaa 60
cagcagtaaa aatgtctatg acagcaattt tctctcccct gaaatatgat ccccacttaa 120
tttgccctat tgaaagaatc ccaagtataa gaacaactgg tttttaatca atattacaaa 180
gatgtttact gttgaatcgc atttttcttt ggcttcttaa aatcccttag gcattcaatc 240
ttcagctctt ccataattga gaggaaattt tcacctcaaa tgttcatcca gtgcaattga 300
aagacgtcac agtgccaggc actggattca gaaccttcac aaaaaaaaaa tctgcccaga 360
gacagatgag gtccttcagc tccagtgctg attggttcct ttccaaggga ccatccaatc 420
ctaccacgca tggaaacatc cacagatttt tattctttct gccaggtaca tcagatccat 480
caggtccgag ctgtgttgac taccactttt cccttcgtct caattatgtc ttggaaaaag 540
gctttgcgga tccccggagg ccttcgggca gcaactgtga ccttgatgct gtcgatgctg 600
agcaccccag tggctgaggg cagagactct cccggtaagt gcagggcagc tgctctccag 660
agccgctact ctgggaacag gctctccttg ggctggggta cggggatggt gatctccata 720
atctcggaca caatctttta tcaacatttc ctctgttttg ggaaagagag ctatgttgca 780
tttccattta tcttttaatg atgaagtgag gacaatccaa tcccatccta caggcttaag 840
cctggaagag gaggagagag gagagaaaag aggagacaaa gtgttcattt actaccagtg 900
ataggacaaa gtgagcatgg ggttattttt gaagatatga atttctccaa agacacagca 960
ggatttgcca tttaggcgtg tcccaagact tgcctggact aaatattatg atttcctgca 1020
ttgggaaatg caaggcagca atggtgtctg tagtctccgt atttggggaa aagttgtctg 1080
tattcctgac ccagtggagc gtttgtggag gcaaaatctt ggtactgagg gaagctgact 1140
ggctgaccac agaaagagag ccttcaggtt tcactgattt atgggcaaat ggtgacctga 1200
gtgggattca gatacccgag ttgatgatgg actaaattta gtagaaagga ggatgtaaag 1260
aagggaaata acacatactg tgaaaccact catttcagac acagaacaat actttacata 1320
aattctctct cactccttct aacatcctgt gtgtagatat catgattttc ttttacacaa 1380
ttatacttgt gatatggata ttctgttaca taaactgccc gggctggtga ctgccacagt 1440
ttaatgggaa tctagtttat caaattcaaa agcttgtgct ctttcggtga ataaatgttt 1500
ctttctagga ctcagagatc taggactccc ttctttctaa cacagacgtg agtgaacctc 1560
acagggcact tgggagggta aatccaggca tgggaaggaa ggtattttac ccagggacca 1620
agagaatagg cgtatcggaa gaggacaggt ttaattcctg gacctgtctc gtcattccct 1680
tgaactgtca ggtttatgtg gataacttta tctctgaggt acccaggagc tccatggaaa 1740
atgagatttc atgcgagaac gccctgatcc ctctaagtgc agaggtccat gtaaaatcag 1800
cccgactgcc tcttcacttg gttcacaggc cgagacaggg acagggcttt cctccctttc 1860
ctgcctgtag gaaggcggat tcccgaagac ccccgagagg gcgggcaggg ctgggcagag 1920
ccgccgggag gatcccaggt ctgcagcgcg aggcacgggc cggcgggaac ttgtggtcgc 1980
gcgggctgtt ccacagctcc gggccgggtc agggtggcgg ctgcgggggc ggacgggctg 2040
ggccgcactg actggccggt gattcctcgc agaggatttc gtgtaccagt ttaagggcat 2100
gtgctacttc accaacggga cagagcgcgt gcgtcttgtg agcagaagca tctataaccg 2160
agaagagatc gtgcgcttcg acagcgacgt gggggagttc cgggcggtga cgctgctggg 2220
gctgcctgcc gccgagtact ggaacagcca gaaggacatc ctggagagga aacgggcggc 2280
ggtggacagg gtgtgcagac acaactacca gttggagctc cgcacgacct tgcagcggcg 2340
aggtgagcgg cgtcgcccct ctgcgaggcc cacccttggc cccaagtctc tgcgccagga 2400
ggggcgaagg gtcgtggcct ctggaacctg agccccgttt gttccacccc agaggacagg 2460
aggcagcggc gagagtggtg ggggcaggtg catcggaggt gcggggacct agggcagagc 2520
agggggacag gcagagttgg ccaggctgcc tagtgtcgcc ccagcctacc cgttcgtcgg 2580
ccttgtcctc tgctctgcat gttcttgcct cgtgccttat gcatttgcct ccttttgcct 2640
tacctttgct aagcagctct ctctgctcag aatgcccgcc ctcttcccct gcccgcccgc 2700
ccgccccact agcactgccc cacccagcaa ggcccacgtg cacagctctt gcagcaggaa 2760
gcttcaggct tagcctggtg gagttagggc tgttccacaa ctgcgcgcag gacattcagc 2820
aattacagtt gtgaaataag atattttaac ttttggcttc aaatcattat tcatcgtaat 2880
tctgttttct taaatggctc tcattcatgg cagagatctt tgaggtgagg gtgttttaat 2940
cattgcatgc ctagtacctg acacattgac tggtatgtgg tgtgagctca atgatcttct 3000
gttaaattaa tgaataaatg tactcagctg cccatccact taggctcaag aaaaaaaaag 3060
aggtaaacag agccttaaaa atggacttta ttaattattt tctataattt tgcttaatgc 3120
tttaaagtaa actcttattg acttggatct taatagagtt tgtgaataca aaatctgagg 3180
aaaaaagttt ttgctaaaaa taaaaacaac gcttgaaaga tattgtaagg cagtttaaat 3240
ttcttttctt ttcttttttt tttttttttg agacggattc tcactctgtc gcccaggccg 3300
gagtgcagtg gcgcgatctc ggctcactgc aagctccgcc tcccgggttc acgccattct 3360
cctgcctcag cctcctgagt aggtgggatt acaggcgcgt gccaccacgc ccggctaatt 3420
tttttgtatt tttagtagag gcggggtttc accgtgttag ccaggatggt ctggatctcc 3480
tgacctcatg atccgcccgc ctcggcctcc caaagtgctg ggattacagg tgtgagccac 3540
agtgcccggc cggcactttt aatttcttag aaaagctgaa caaatggcac aatgcaaaga 3600
gcaaaagttt tggaataaat agattgaagc cattaaatta ttggataaaa atagtttcgg 3660
gttgcttttg gcctaggttc tcccctcccc ccatgactat ccacttcagg aataaacatt 3720
ctgaaagtca attttaccca tttagtgagc atttatttct agacagttgc cttatcaaat 3780
accatctatg ttacgtcatt taatctcaca gttacttgtg catcagagat tagcatcacc 3840
actttatata ttggtacatg ataaacactt tattggtcat ggatggggag atggtcactg 3900
taggctaata ttggtacatg ataaacactt taagtaatca gcccataatt gctcaccaag 3960
accttaagcc tcccaaagta cacaacattc tttgtgttct tcactacaca tccatagagt 4020
ctaagggacg taaagcctcg ttaaagccag ttttgaccag aagcagcaat gagtctattc 4080
ctgtgtgttt tccatgttaa tgggacaaaa tgatactttc aaggcattga aaattcatga 4140
ttaatcaatc cctagtctga ccccagtgtt atctatgcag gtttgcaaaa cctttagttt 4200
acttaatact cccttgcctt cttttgattc acatcctaat gccagcaaat acttatgttt 4260
ttgctatttc agttccattt ccataaaatt tattttatca tcttttctca taaatttatg 4320
ccctctattt ttactcccaa tctgtttaag atgaacaaat cttataaggc cacatagctg 4380
actgttattt ctgttggact ccaggaagga gaacctaaag aaaagttcaa gtccaagcag 4440
aaaccgtgat ttcttccaga tgatggctca tgagtgccat ttaattgggg tgccacctgg 4500
tgacctcagc aaatcccagc tatatttatg tgttcacatt acaggatcat taacccagac 4560
cgaccactgc acagatctca gaatattttc tatggagaac atacataata atgcctgatt 4620
tcagaagaag aaagtaattc tcaatagcaa ggggatggag tagggtagac agctgtaatt 4680
aaactcactt gtgtgataaa aagaaattaa ggaaaaaaga aaatgagaga acatattact 4740
aaataaagaa agcatacatt aaatatttac tatagtttca cactaagaga ataaaggaaa 4800
tgcaataaag tggcctgaaa ggtaaaggat gagatgtgta aaggggtgta gtatttttac 4860
tatgagcagc aatctgagaa gataaaggaa tcgagttacg ggcaaacatg atgtttgatc 4920
agtgttattt gttttcaagg cctgcctaaa tttttttcaa atattacaaa cttttgaaat 4980
aacattcttt ttgttttttg ctgtctgtta ctaggttgca cattttataa aggcagggac 5040
catggtatgt tgtttgtctt tggattctca gtgattgtta tatttatatt tgttgaagga 5100
accttaatcc aagacttgga ctccaagtat ctttccactc tggttccaag gagggacctt 5160
cctcacagca ggcatgctgt gtggtctcac atctcactcc tatatctttc cctgtctgtt 5220
actgccctca gtggagccca cagtgaccat ctccccatcc aggacagagg ccctcaacca 5280
gcacaacctg ctggtctgct cggtgacaga tttctatcca gcccagatca aagtccggtg 5340
gtttcggaat gaccaggagg agacagctgg cgttgtgtcc acccccctta ttaggaatgg 5400
tgactggacc ttccagatcc tggtgatgct ggaaatgact ccccagcgtg gagacgtcta 5460
cacctgccac gtggagcacc ccagcctcca gagccccatc accgtggagt ggcgtaaggg 5520
gatattgagt ttctgttact gtgggcccca caagacaaag gacagagctc cttctgaccc 5580
atcccttccc atctcttatc cctgatgtca ctgctgagct gggaatcaca ggagactaga 5640
gcacctctag ttccatggcg agtgcatcag aagaatcctg atctcatcac ctttccagat 5700
gctagggaaa ttactctaca tactgttgct ctggatccca gtcctgattg ctctgaggaa 5760
ctgattatta gggctggtga ctgggatctt agggtctaag tttatggatg agttcctgag 5820
gagtggagat ctgcttcccc actctgtcac ctactcactg tatccaagga cctattggct 5880
ggcctttccc tcccttaggg gtggtctgaa tggagaacta ggttcctttg atgccttcac 5940
ctcctgcatc tcagactgga cttcagctcc tcatcaggga aactatgggg tatggggaca 6000
aacactgaca ctcaggctct gcttctcagg ggctcaatct gaatctgccc agagcaagat 6060
gctgagtggc attggaggct tcgtgctggg gctgatcttc ctcgggctgg gccttatcat 6120
ccatcacagg agtcagaaag gtgaggaacc ccaggggaaa aggggaagat ggcctgtgac 6180
ccagaccctc tgttcagaga ggtcctgtct ctagatgtag ctctttcctc ctgaccctga 6240
gaggaagaaa gctgagctgg aagtggaagg agacaggaca aggttggagg aggcattgga 6300
atctgatttt actagctgaa gggtagccct gtcacagagc tgactgatag agcttattcc 6360
agggcatcct taccattcat cattgtctca ctggctcctt tccaaaaact tcctccatta 6420
agagggtcag agcctcggcc tccttgcctt ctagtgacaa tttcctttat tttaggggat 6480
tttaaattag ggtgcttaag gacttgaaga acatgaatgg gaagagaata taactctaat 6540
taagtcacat gtgtcatttt cctttggggt gagagagtgg ctgttcatgt aatgagacct 6600
ttctctgcat aacttccttt tgtaagacct caagggcctc caccagcagg taatatttca 6660
gccgtgatcc agtgtgggga gggcacaggt gtaagaggga agagcatgag ctgagtgtac 6720
ctgacagtag tggtctctgt tcatggtata tttgctgcta tgaggatcaa gacttagggg 6780
tgaagtttgc cagtttctag gaatctccag aggttgttcc ccagaaccaa gccttaactt 6840
tggtggtatc ttcctgttaa atgtggagcc agaaccacgg cttaaatgtt agacactagg 6900
atgatgccca ctttgtgcca catgatggtg gctactgcct gtaggcattt tccagtgact 6960
gaaagaggct gctagtggta gggatgaggt atcatccaat ttcctaaaaa gattgaaccc 7020
ttcatattca ccagaagagt aacagctgtt cccccacctc ccacacatct gcatcaagct 7080
gaagttctgt gtcttcatga gctgatttca cctttgcaca gatcttgggg gaggtgatga 7140
caatacactc tggacctcag ctttgtctgt ctgaagctgc aggaggcccc tgaggggtgg 7200
ggaagatggc aggcccacca gcgtaccctg tgctgatcat ccctcttctc tcttcttcag 7260
ggctcctgca ctgactcctg agactatttt aactgggatt ggttatcact tttctgtaac 7320
gcctgcttgt ccctgcccag aattcccagc tgtctgtgtc agcctgtccc cctgagatca 7380
gagtcctaca gtggctgtca cgcagccacc aggtcatctc ctttcatccc caccttgagg 7440
cggatggctg tgaccctact tcctgcactg acccacagcc 7480
//