Dbfetch
ID OU413110; SV 1; linear; genomic DNA; STD; HUM; 7089 BP. XX AC OU413110; XX PR Project:PRJEB46222; XX DT 14-JUN-2023 (Rel. 144, Created) DT 15-JUN-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens, HLA-DQB1 gene for MHC class II antigen, cell line DE DKMS-LSL_ID19405648_DQB1_1, allele HLA-DQB1*05:new XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Albrecht V., Schmidt H. A., Klussmeier A., Lange V., Putke K.; RT ; RL Submitted (14-JUL-2021) to the INSDC. RL DKMS LIFE SCIENCE LAB, Research & Development, St. Petersburger Str. 2, RL Saxony, 01069 Dresden, Germany XX DR MD5; fec762bb681b2e3ce646aa701144f193. XX FH Key Location/Qualifiers FH FT source 1..7089 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /cell_line="DKMS-LSL_ID19405648_DQB1_1" FT /db_xref="taxon:9606" FT exon 1..632 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=1 FT CDS join(524..632,2091..2360,4870..5151,5663..5773,6238..6261, FT 6871..6884) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAG8857713.1" FT /translation="MSWKKSLRIPGDLRVATVTLMLAILSSSLAEGRDSPEDFVYQFKG FT LCYFTNGTERVRGVTRHIYNREEYVRFDSDVGVYRAVTPQGRPDAEYWNSQKEVLEGAR FT ASVDRVCRHNYEVAYRGILQRRVEPTVTISPSRTEALNHHNLLICSVTDFYPSQIKVRW FT FRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSAITVEWRA FT QSESAQSKMLSGVGGFVLGLIFLGLGLIIRQRSRKGPQGPPPAGLLH" FT intron 633..2090 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=1 FT exon 2091..2360 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=2 FT intron 2361..4869 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=2 FT exon 4870..5151 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=3 FT intron 5152..5662 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=3 FT exon 5663..5773 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=4 FT intron 5774..6237 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=4 FT exon 6238..6261 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=5 FT intron 6262..6870 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=5 FT exon 6871..7089 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*05:new" FT /number=6 XX SQ Sequence 7089 BP; 1797 A; 1645 C; 1704 G; 1943 T; 0 other; ttctaagacc tttgctcttc tccccaggac ttaaggctct tcagcgtgtc taagacaaca 60 gcagtaaaaa tttctgtgac agcaattttc tctcccctga aatatgatcc ccacctaatt 120 tgctttatta aaaatcccaa gtataataac aactggtttt taacaatatt acagagatgt 180 ttactgttga attgcatttt tcttttgcct ctcaaaatcc ctgaggaatt tgttcttcag 240 ctcttctata atcgagagga aattttcacc tcagatgttc atccagtgca attggaagac 300 gtcacagtgc caggcactgg attgagaacc ttcacaaaaa aaatgtctgc ccagagacag 360 atgaggtcct tcagctccag tgctgattgg ttcttttcca agcgaccatc caatcctgcc 420 acgcacggaa acatccacag gtttttattc tttctgccag gtacatcaga tccatcaggt 480 ctgagctgtg ttgactacca ctacttttcc cttcgtctca attatgtctt ggaagaagtc 540 tttgcggatc cccggagacc ttcgggtagc aactgtcacc ttgatgctgg cgatcctgag 600 ctcctcactg gctgagggca gagactctcc cggtaagtgc aggaaagctg ctctccagag 660 ccgccactct gggaacaggc tttccttggg ctggggtatg ggggatggtg atctccatgg 720 tcttggacac aatctttcat caacatttcc tcttttttgg gaaagaaagc tatgttgcat 780 tcccatttac cttttagtga tgaaatgagg acaatccaat ccccatccta caggtttaag 840 cctggaagag gaggagagag gagaggaaag aggagataaa gtgtacattt actaccagtg 900 ataggacaaa gtgagcatgg ggttattttt gaagatatta atttctccaa agacacagca 960 ggatttgtca tttcagcgtg ccccaagact ttgcctggac taaatattat gagattctgc 1020 agtgggaaat gtaaggcagc gatggtgtct gtagtctccg tatttgagga aaagtagtct 1080 gtattcctga ctgactggag cgtttgtgga ggcaaaatct tggtactgag ggaagctgac 1140 tggctgacca cagacaggga gtcttcaggt ttcactgatt tatgggcaaa tggtgacttg 1200 agtgggattc agagacccga gttgctggtg gactaaattt agtagaaagg aggatgtaaa 1260 gaagggaaat aacacatatt atgaaaccac tcactcagac acagaacaat actttacata 1320 aattctctct cactccttct aacatcctgt gtgcagatat catgattttc ttttacacaa 1380 ttatacttgt gatacggata ttctgcccaa tatggatata cacaacctgg ccaagctggt 1440 aactgccaca gtttaatagg aatctagttt atcaaattca aaagcttatg ctctttccat 1500 gaataaatat ttctatctag gactcagagt tgtaggtcct ttccaacata gaagggagtg 1560 aacctcaacg ggtcttggga gggtaaatcc aggcatggga aggaaggtat tttacccagg 1620 gaccaagaga atacgcgtat cagaacgagg acaagattaa ttcctggacc tgtcgcatca 1680 ttcccttgaa ctcacaggtt tatgtggata agtttatctc tgaggtttcc aggagctgca 1740 tgaaaaatgg gatttcatgc gagaacgccc cgatccctct aagtgcagag gtccatgtaa 1800 aatcagcccg actgcctctt cgctgggttc actggctcag gcagggacag ggctttccgc 1860 cctttcctgc ctgtaggaag gcggattccc gaagccccca gagagggcgg gcagggctgg 1920 gcagagccgc cgggaggatc ccaggtctgg ggcgccaggc acgggctggc gggaactgga 1980 ggtcgcgcgg gcggttccac agctccggtc cgggtcaggg cggcggctgg gggcgcagcc 2040 gggctagggc caggctgggg cctgactgac tggcccgtga ttccccgcag aggatttcgt 2100 gtaccagttt aagggcctgt gctacttcac caacgggacg gagcgcgtgc ggggtgtgac 2160 cagacacatc tataaccgag aggagtacgt gcgcttcgac agcgacgtgg gggtgtatcg 2220 ggcggtgacg ccgcaggggc ggcctgacgc cgagtactgg aacagccaga aggaagtcct 2280 ggagggggcc cgggcgtcgg tggacagagt gtgcagacac aactacgagg tggcgtaccg 2340 cgggatcctg cagaggagag gtgagcgtcg tcgcccctcc gtgaggccca ccgttggccg 2400 ggacctctag tctctgtgct gggaggggcg atggggttgc ggcctctgaa acctgagccc 2460 cgtttattcc accccagggg acaggagttg gcggcgtgag tggtggggca ggtgcatcag 2520 atgggcgggg acctagggca gagcagggag acaagcagag ttggccaggc tgcctagtgt 2580 ccccccaggg tcctcctctg ttggcctcgt cctccgctct gcacgtttct cgcctcgtgc 2640 cttatgtgtt tgcctcctcg tgccttacct ttgctaagca gttctctctg cccccaatgc 2700 ccaccctctt cccctgcccg tccgccccac tagcactgcc ccattcagca aggcccacgt 2760 gcgcagctcg cgcctcagga agcttcaggc ttggcctggt ggagttaggg ctgccccaca 2820 actgcgccca gggcatccag caattacagt tgcaaaataa gatattttga ctttttggct 2880 tcaaatcatt attcatcgta attctgtttt cctaaatggc tatcactaat ggcggagatt 2940 tttgaggtgg gagactgttt aaattattgc atgcttggta cctgacactt tgactggtat 3000 gtggtatgag ctcaatgatc ttctgttaaa ttcatgaata aatgtactca gctgcccatc 3060 cacttaggct caagaaaaaa acagaggctt acaaatggac tttgttaatt attttctatc 3120 attttgctta atgctttaaa gtaaactctt attgactagg atcttaatag aatttgtgaa 3180 tacaaagtct gagaaaaaaa gtgtttgcta aaaataaaaa caatgcttga atgacgttgt 3240 aaggcagagt tttaatttct tagacaagct gaacaaatgg cacaatgcaa agggcagaag 3300 tttgggaata aataggttga agccattaaa ttattagata aaaatagttt caggttgctt 3360 ttggcctggg ttctcccctc cctccatcac tatccacttc aggaataaac attctgaaag 3420 tcaattttac ccattcaggt agcacttatt tctagacagt tgccttatca aataccatat 3480 atgttgtgcc atttaatctc acagttacct gtgcattaga gattagcatc accacttgat 3540 atatcctaat attggtacag gataaacact ttaagtaatc agcccacaat tactcaccaa 3600 gaccttaagc ctcccaaagt ataaaccatt cttatgttcc tcagtgtaca tccatagagt 3660 ctaagggatg taaggccttg ttaaagccag ttttgaccag aagcagcaat gagcctattc 3720 ctgtttgttc tccatgttaa tggggcattg aaaattcact gattaatcaa tccctagtct 3780 gaccccagtg ttatctatgc aggttcacaa aacttttaga ttactttaca cccccttgcc 3840 ttcttttgac tcacattcta atgccagcaa gtacttatat ttttgctatt tcaattctat 3900 ttccataaaa tttattttat catcttttct cataaaattg tgccttctat tttactccca 3960 gtctgtttaa gatgaacaaa tcttacaagg tcacatagct gactgtgata tcagttggac 4020 tccaggaagg agaacctaaa gaaaagttca agtccaagca gaaaccgtga ttccttccgg 4080 atgatggctc aagagtgctg tttaactggg atgcaacctg ctgacctcag caaatcctag 4140 ttatatgtat gtgttcacat tacaggctca ttagcccagg ccgacctctg catggatctc 4200 agaatatttt ctatggagaa catacatgat aatgtctgat ttcagaacaa gaaagtaatt 4260 ctcaatagca aggaaatgga gtagggtaga cagctagtaa ctaaactcac ttgtgcgtta 4320 agaagaaatt aaggaaaaaa gaaaataaga gaacatatta ctaaataaag aaacacacat 4380 taaatatttg ctatagtttc acactaagag aataaaggaa atgcaataaa gtggcctgaa 4440 aggtaaagga tgagatgtgt aaaagaggca gggaaagatg tataataatt ttttactatg 4500 agcagcaatc tgagaagata aaggaattga gctgtgggca aacatgatgt ttgatcagtg 4560 ttatttgttt tcaaggcctg cctacttttt ttttcaaata ttacaaactt ttgaaataac 4620 attctttttg ttttttactg tctgttacta gattgcatat tctataaatg aagggaccat 4680 ggtatgttgt ttatctttgg attctcagtg attgtcaaat ttatatttgt tgaaggaacc 4740 ttaatccaag acttggactc caggtatctt tccactctgg ttccaaggag ggaccctttc 4800 tcatggtgga catgctgtgt ggtctcacgt ctcactcctg tgtcttttcc tgtctgttac 4860 tgcccttagt ggagcccaca gtgaccatct ccccatccag gacagaggcc ctcaaccacc 4920 acaacctgct gatctgctcg gtgacagatt tctatccaag ccagatcaaa gtccggtggt 4980 ttcggaatga tcaggaggag acagccggcg ttgtgtccac ccccctcatt aggaacggtg 5040 actggacctt ccagatcctg gtgatgctgg aaatgactcc ccagcgtgga gatgtctaca 5100 cctgccacgt ggagcacccc agcctccaga gcgccatcac cgtggagtgg cgtaaggaga 5160 tattgagttt ctgttattat gggccccaca agacaaagag ctccttctga cccattcctt 5220 cccatctctt atccctgatg tcactactga gctgggaatc acaggagact agagcacctc 5280 tagttccatg gcgagtgcat cagaagaatc ctgatctcat cacctttcca gatgctaggg 5340 aaattactct acatactgtt gctctggatc ccagtcctga tagctctgac ggactgattc 5400 ttagggctgg tgattgggat cttagggtct aaggttatgg atgagttcct gaggagcaga 5460 gatttgcttc cccactctct cacctaccca ctgtatccaa ggacctattg tctggccttt 5520 cccctcctta ggggtggtct gaatggagag ctaggttcct ttgatgcctt cacctcctgc 5580 acctcagact ggacttcagc tcctcagcag ggatgctatg gggtgtgggg acaaacaccg 5640 acactcaggt tctgcttttt aggggctcag tctgaatctg cccagagcaa gatgctgagt 5700 ggcgttggag gcttcgtgct ggggctgatc ttccttgggc ttggccttat catccgtcaa 5760 aggagtcgga aaggtgagga accccagggg aaaaggggaa gatgggctgt gacccagacc 5820 ctctgttcag agtggtcctg tctgtagatt agctctttcc tcctgaccct gagaggaagt 5880 gcgaggagac aggacaagat gggaggaggc attggaatct gattttactg gttgaaaggt 5940 agcgctgtca cagagctgac tgatagagct tattccaggg catccttacc attcatcatt 6000 gtctcactgg ctcctttcca aaagcttcct ccattaagag ggtcagagcc tcagcctcct 6060 ttctttctgg tgacaatttc ctttgtttta ggggatttta aattagggtg ctgaaggcct 6120 ggaagaacat gggtgggaag agaatgtaac tctaagtcat gtgtgtcatt ttcctttggg 6180 gtgagagagt ggctgtttgt gtaatgagac ctttctctgc ataacttcct tttgtaggac 6240 ctcaagggcc tccaccagca ggtaatattt cagccatgat ccagtgtggg gaggcacagg 6300 tataagaggg aagagcatga gctgagtgta cctgaccaca gtggtccatg ttcatggcct 6360 atttgctgct atgaggatca agacttaggg gagaagtttg ccagtttcta ggaatctcca 6420 gacattgttc cccagaacca agccttaact ttggtggcat cttcttgtga aatgtggagc 6480 cagaaccaca gcttaaatgt tagacactag gatgatgccc actttgtgcc acatgatggt 6540 ggctactgcc tgtaggcatt ttccagtgac tgaaagaggc tgctagtggt cgggatgaga 6600 tatcatccaa tttcctaaaa agactgaacc cttcatattc cccagaagaa taacagctgt 6660 tccccacctc ccacacatct gcatcaagct gaagttctgt gtcctcgtga gctgatttca 6720 cctttgcaca gatcttgggg gaggtgatga caatacaccc tggacctcaa ctttctctgt 6780 ctgaagctgc agggggcccc tgaagggtgg gggagatggc aggcccacca ggataccctg 6840 tgctgatcaa tcctcttctc tcttctccag ggcttctgca ctgactcctg agactgtttt 6900 aactaagact ggttatcact cttctgtgat gcctgcttgt ccctgcccag aattcccagc 6960 tgcctgtgtc agcttgtccc cctgagatca aagtcctaca gtggctgtca cgcaaccacc 7020 aggtcatctc ctttcatccc caccccaagg cgctggctgt gactctgctt cctgcactga 7080 cccagagcc 7089 //