Dbfetch
ID OU242057; SV 1; linear; genomic DNA; STD; HUM; 7195 BP. XX AC OU242057; XX PR Project:PRJEB45878; XX DT 25-AUG-2021 (Rel. 144, Created) DT 25-AUG-2021 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-DQB1 gene for MHC class II antigen, allele DE HLA-DQB1*03:01:01:NEW XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Lucas J., Lucas AM J.; RT ; RL Submitted (23-JUN-2021) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, 77C Fleet Road, London, NW3 2QU, United RL Kingdom XX DR MD5; 429a5f8387e4466f0f8c645ae88dd124. XX FH Key Location/Qualifiers FH FT source 1..7195 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300728" FT /db_xref="taxon:9606" FT CDS join(427..535,1984..2253,4883..5164,5682..5792,6278..6301, FT 6913..6926) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAG7468618.1" FT /translation="MSWKKALRIPGGLRAATVTLMLAMLSTPVAEGRDSPEDFVYQFKA FT MCYFTNGTERVRYVTRYIYNREEYARFDSDVEVYRAVTPLGPPDAEYWNSQKEVLERTR FT AELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW FT FRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQHGDVYTCHVEHPSLQNPITVEWRA FT QSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGPQGPPPAGLLH" FT exon 427..535 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=1 FT intron 536..1983 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=1 FT exon 1984..2253 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=2 FT intron 2254..4882 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=2 FT exon 4883..5164 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=3 FT intron 5165..5681 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=3 FT exon 5682..5792 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=4 FT intron 5793..6277 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=4 FT exon 6278..6301 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=5 FT intron 6302..6912 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=5 FT exon 6913..6926 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:01:01:NEW" FT /number=6 XX SQ Sequence 7195 BP; 1828 A; 1691 C; 1717 G; 1959 T; 0 other; gaaatatgat ccccacttaa tttgccctat tgaaagaatc ccaagtatga aaacaactgg 60 tttttaatca atattacaaa gatgtttact gttgaatcgc attttttttg gcttcttaaa 120 atcccttagg cattcagtct tcagctcttc cataattgag aggaaatttt cacctcaaat 180 gttcatccag tgcaattgga agacgtcaca gtgccaggca ctggattgag aaccttcaca 240 aaaaaaaatc tgcccagaga cagatgaggt ccttcagctc cagtgctgat tggttccttt 300 ccaagggacc atccaatcct accacgcatg gaaacatcca caggttttta ttctttctgc 360 caggtacatc agatccatca ggtccgagct gtgttgacta ccactacttt tcccttcgtc 420 tcaattatgt cttggaaaaa ggctttgcgg atccccggag gccttcgggc agcaactgtt 480 accttgatgc tggcgatgct gagcacccca gtggctgagg gcagagactc tcccggtaag 540 tgcagggcag ctgctctcca gagccgccac tctgggaaca gactctcctt gggctggggt 600 atggggatgg tgatctcgat tatctcagac acaatcttta tcaatatttc ctctgttttg 660 ggaaagagag ctatgttgca ttcccattta tcttttaatg atgaggtgag gacaatccaa 720 tcccatccta cagacttaag cctggaagag gagagaggag agaaaagagg agacaaagtg 780 ttcatttact accagtgata ggacaaagtg agcatggggt tatttttgaa gatatgaatt 840 tctccaaaga cacagcatga tttgtcattt aggcgtgccc caagactgcc tggactaact 900 attatgagat cctgcactgg gaaatgtaag gcagcaatgg tgtctgtagt ccccgtattt 960 ggggaaaagg tgtctgtatt cctgactcag tggagcgttt gtggaggcaa aatcttggta 1020 ctgagggaag ctgactggct gaccacagac agggagtctt caggtttcac tgatttatgg 1080 gcaaatggtg acctgagtgg gattcagaga cccgagttga tggtggacta aatttagtag 1140 aaaggaggat gtaaagaaga gaaattacac atactgtgaa accactcatt tcagacacag 1200 aacaatactt tacataaatt ctctctcact ccttctaaca tcctgtgtgt agatatcatg 1260 attttctttt acacaattat acttgtgaca tggatattct gttacgtaac ctgcccgagc 1320 tggtgactgc cacagtttaa tgggattcta gtttatcaaa ttcaaaagct tgtgctcttt 1380 cagtgaataa acgtttcttt ctaggactca gagatctagg actcccttct ttctaacaca 1440 gaagtgagtg aacctcacag ggcacttggg agggtaaatc caggcatggg aaggaaggta 1500 ttttacccag ggaccaagag aataggcata tcaaaagagg acaggtttaa ttcctggacc 1560 tgtctcgtca ttcccttgaa ctctcaggtt tatgtggata actttatctc tgaggtaccc 1620 aggagctcca tggaaaatgg gatttcatgc gagaacgccc tgatccctct aagtgcagag 1680 gtccatgcaa aatcaacccg actgcctctt cgcttggttc acaggcccag ccagacaggg 1740 acagggcttt cctccctttc ctgcctgtag gaaggcggat tcccgaagac ccccgagagg 1800 gcgggcaggg ctgggcagag cccccgggag gatcccaggt ctgcagcgcg aggcacgggc 1860 cggcgggaac tggaggtcgc gcgggcggtt ccacagctcc gggccgggtc agggcggcgg 1920 ctgcggggtg gccgggctgg ggccgggccg gggccggact gaccggccgg tgattccccg 1980 cagaggattt cgtgtaccag tttaaggcca tgtgctactt caccaacggg acggagcgcg 2040 tgcgttatgt gaccagatac atctataacc gagaggagta cgcacgcttc gacagcgacg 2100 tggaggtgta ccgggcggtg acgccgctgg ggccgcctga cgccgagtac tggaacagcc 2160 agaaggaagt cctggagagg acccgggcgg agttggacac ggtgtgcaga cacaactacc 2220 agttggagct ccgcacgacc ttgcagcggc gaggtgagcg tcgtcgcccc gctgcgaggc 2280 ccactcttgg ccggggcccc gagtctctgc gctaggaggg acgagggggg cgaagcctct 2340 ggaacctgag ccgcgttcgt tccaccccag gggacaggag ttggcggcgt gggtggtggg 2400 gcaggtgcat aggaggggca gggacctagg ggcagagcag gggtacaggt agagttggtc 2460 aaactgccta gttttgcccc agccttcccg tccgtcagcc tcgccctctg ctgtgcacgt 2520 tctcgcctcg tgccttatgc gtttgcctcc tcgtgccttg cctttgctaa gcagtcctct 2580 ctgcccccaa tttctgccct cttcccctgc ccgcccgccc cgctagcact gccccaccca 2640 gcaaggtcca cgtgcactgc tcgcgccgca ggaagcttca ggcttggcct ggtggagtta 2700 gggctgctcc acaactgtgc gcagggcatc cagcaattac agttgtgaaa taagatattt 2760 tgacttttgg cttcaaatta ttattcatcg taattccgtt ttcttaaatg gctctcattc 2820 atggcggagc tctttgaggt gagagtgttt taatcatttt atggccggta cctgacacat 2880 tgactggcat gtggtataag ctcaataatc ttctgttaaa ttaatgaata aatgtgctca 2940 gctgccaatc cacttaggct caagaaaaac cagaggtaaa cagaacctta aaaatggact 3000 tttattaatt attttctatc attttgctta attctttaaa gtaaactctt attgacttgg 3060 atctaaatag tttgtgaata caaagtctga ggaaaaaagt gtttgctaaa aataaaaaca 3120 acacttgaat gatgtttgta aggcagtttt aatttcttag aaaagctgaa caaatggcac 3180 aatgcaaaga gcagaagttt tggaataaat agattgaagc cattaaatta ttggataaaa 3240 atagtttcag gttgcttttg gcctaggttc tcccctcccc ccatcactat ccacttcagg 3300 aataaacatt ctgaaagtta attttaccca tatagtgagc acttatttct aagttgcctt 3360 atcaaatacc atctatgtta tgtcatttaa tctcgcagtt gcctgtgcat tagagattag 3420 catcaccact ttatatatcc taatattagt acatgataaa cactttaagt aatcagccca 3480 caagtactca ccaagacctt aagcctccca aagtacacaa cattcttacg ttcctcacta 3540 cacatctgta gagtcaaagg gacataaagc cttgttaaag ccagttttga ccagaagcag 3600 caatggtctc ttcctgtttg atctccatgt taatgggaca aaatgatact ttcaaggcat 3660 tgaaaattta tgattaatca atcaaattta tgattaatca atccctagtc tgactccagt 3720 gagattcaca aaactttcag tttactttat actcccttgc cttcttttga ctcacatcat 3780 agtgccggca agtacttata tttttgctat ttcagttcta tttccataaa atttatttta 3840 tcatcttttc tcataaattt gtgccctcta tttttactcc caatctgtgt aagatgaaca 3900 aatcttataa gaccacatag ctgactgtga tttcaggtgg actccaggaa ggagaaccaa 3960 agaaaacttt cagtcttttt aagatgaaca aatcttgtaa gtccccacat agctgactgt 4020 gatttcaggt ggactccagg aaggagaacc aaagaaaagt tcaagtccaa gcagaaaccg 4080 tgattccttc cggatgatgg ctcatgagtg ccatttaatt ggggtgccac ctgctgtcct 4140 cagcaaatcc cagctatatg tatatgttcg cattacaggc tcattaacct aggctgacct 4200 ctgcaaggat ctcagaatat tttctacaga gaacatacat gataatatct gattttagga 4260 caaaaaagta attctcaata gcaagggaat ggagtagggt agacagctag taattaaact 4320 cacttgtgtg ttaaaaataa attaaggaaa aaagaaaatg agagaacata ttactaaata 4380 aagaaagcat acattaaata tttactatag ttttacacta agagaataaa ggaaatgcaa 4440 taaagtggcc tgaaaggtaa aggatgagat gtgtaaaaga ggcggggaaa gatgtgtcat 4500 ttttttttta ctatgagcag caatctgaga agataaagga atcgagttat gggcagacat 4560 gatgtttgat cagtgttatt tgttttcaag gcctgcctac ttttttttca aatattacaa 4620 acttttgaag tcacattctt tttgtttttt gctgtctgtt actagatcgc acattctgta 4680 aaggcaggga ccatggtatg ttgtttatct ttggattctc agtgattgtc atatttatgt 4740 ttgttgaatg aatcttaatc caagacttgg gctccaggta tctttccatt ctggttccaa 4800 ggagggacct tcctcacagc aggcgtgctg tgtggtctca catctcactc ctatatcttt 4860 ccctgtctgt tactgccctc agtggagccc acagtgacca tctccccatc caggacagag 4920 gccctcaacc accacaacct gctggtctgc tcagtgacag atttctatcc agcccagatc 4980 aaagtccggt ggtttcggaa tgaccaggag gagacaaccg gcgttgtgtc cacccccctt 5040 attaggaacg gtgactggac cttccagatc ctggtgatgc tggaaatgac tccccagcat 5100 ggagacgtct acacctgcca cgtggagcac cccagcctcc agaaccccat caccgtggag 5160 tggcgtaagg ggatattgag tttctgttac tatgggcccc acaagacaaa gggcagagct 5220 cattctgacc catcccttcc catctcttat ccctgatgtc actactgagc tgggaatcac 5280 aggagactag agcacttctt cctccatggc aagtgcatca gaagaatcct gatctcatca 5340 cctttccaga tgctagggaa attactctac atactgtttc tctggatccc agtcctgata 5400 gctcggaggg actgatcatt agggctggtg actgggatct tagggtttaa ggttatggat 5460 gagctcctga ggagtggaga tctgcttctc cactctctca cctactcact gtacccaagg 5520 acctattggc tggcctttcc cctcccttag gggtggtctg aatggaggac tagtttcctt 5580 tgacgccttc acctcctgaa tctcagactg gacttcagct cctcagcagg gatgctatgg 5640 ggtgtgggga caaacactga cactcaggct ctgcttctta ggggctcagt ctgaatctgc 5700 ccagagcaag atgctgagtg gcattggagg cttcgtgctg gggctcatct tcctcgggct 5760 gggccttatt atccatcaca ggagtcagaa aggtgaggaa ccccaaggga aaaggggaag 5820 atgggctgtg acccagaccc tctgttcaga gaggtcctgt ctctagatgt ggctctttcc 5880 tcctgacccc gagaggaaga aagctgagct ggaggtggga ggagacagga caagattgga 5940 ggagacattg gaatctgatt ttactagttg aaaggtagcc ctgtcacaca gctcactgat 6000 agagcttatt gaaggacatc cttacctttc atcattgtct cattggctcc tttccaaaag 6060 cttcctccat taagagggtc agagccttgg cctccttgcc ttctagtgac aatttccttt 6120 gttttagggg attttaaatt agggtgctta aggccttgaa ggacatgggt gggaagagaa 6180 tataactcta attaagtcac atgtgtcatt ttccattggg gtgagagagt ggctgtttgt 6240 gtaatgagac ctttctctgc ataacttcct tttgtaagac ctcaagggcc tccaccagca 6300 ggtaatattt cagccgtgat ccagtgtggg gagggcacag atgtaagagg gaagagcatg 6360 agctgagtgt acctgaccac agtggtctcc gttcatggta tatttgctgc tatgaggatc 6420 aagacttagg ggcgaagttt gccagtttct aggaatctcc agaggctgtt ccccagaacc 6480 aagccttaac tttggtggca tcttcctgtg aaatgtgaag ccagaaccac agcttaaatg 6540 ttagacacta ggatgatgcc cactttgtgc cacatgttgg tggctactgc ctgtaggcat 6600 tttccagtga ctgaaagagg ctgctagtgg tagggatgag gtatcatcca atttcctaaa 6660 aagaccgaac ccttcatatt ccccagaaga gtaacagctg ttcccccacc tccctcacat 6720 ctgcatcaag ctgaagttct gtgtcttcat gagctgattt cacctttgca cagatcttgg 6780 gggaggtgat gacaatacac tctggacctc agctttgtct gtctgaagct gcagggggcc 6840 cctgaggggt gggggagatg gcaggcccac cagcgtaccc tgtgctgatc atccctcttc 6900 tctcttctcc agggctcctg cactgactcc tgagactatt ttaactggga ttggttatca 6960 cttttctgta acgcctgctt gtccctgccc agaattccca actgcctgtg tcagcctgtc 7020 cccctgagat cagagtccta cagtggctgt cacgcagcca ccaggtcatc tcctttcatc 7080 cccaccccaa ggcgctggct gtgactctgc ttcctgcact gacccagagc ctctgcctgt 7140 gcatggccag ctgcgtctac tcaggcccca aggggtttct gtttctattc tctcc 7195 //