Dbfetch
ID OU242050; SV 1; linear; genomic DNA; STD; HUM; 7087 BP.
XX
AC OU242050;
XX
PR Project:PRJEB45878;
XX
DT 25-AUG-2021 (Rel. 144, Created)
DT 25-AUG-2021 (Rel. 144, Last updated, Version 1)
XX
DE Homo sapiens HLA-DQB1 gene for MHC class II antigen, allele HLA-DQB1*04:51
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RA Lucas J., Lucas AM J.;
RT ;
RL Submitted (23-JUN-2021) to the INSDC.
RL ANTHONY NOLAN RESEARCH INSTITUTE, 77C Fleet Road, London, NW3 2QU, United
RL Kingdom
XX
DR MD5; d44647757eb305cb292d992891bbfdbe.
XX
FH Key Location/Qualifiers
FH
FT source 1..7087
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /clone="AN300721"
FT /db_xref="taxon:9606"
FT CDS join(430..538,1993..2262,4793..5074,5590..5700,6170..6193,
FT 6804..6817)
FT /codon_start=1
FT /transl_table=1
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /protein_id="CAG7468611.1"
FT /translation="MSWKKALRIPGGLRVATVTLMLAMLSTPVAEGRDSPEDFVFQFKG
FT MCYFTNGTERVRGVTRYIYNREEYARFDSDVGVYRAVTPLGRLDAEYWNSQKDILEEDR
FT ASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW
FT FRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRA
FT QSESAQSKMLSGIGGFVLGLIFLRLGLIIHHRSQKGPQGPPPAGLLH"
FT exon 430..538
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=1
FT intron 539..1992
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=1
FT exon 1993..2262
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=2
FT intron 2263..4792
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=2
FT exon 4793..5074
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=3
FT intron 5075..5589
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=3
FT exon 5590..5700
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=4
FT intron 5701..6169
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=4
FT exon 6170..6193
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=5
FT intron 6194..6803
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=5
FT exon 6804..6817
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*04:51"
FT /number=6
XX
SQ Sequence 7087 BP; 1785 A; 1640 C; 1717 G; 1945 T; 0 other;
gaaatatgat ccccacttaa tttgccctac tgaaagaatc ccaagtataa aaacaaccag 60
tttttaatca atattacaaa gatgtttact gttgaatcgc atttttcttt ggcttcttaa 120
aatcccttag gcattcaatc ttcagctctt ctataattga gaggaagttt tcacctcaaa 180
tgttcatcca gtgcaatttg aagacgtcac agtgccaggg actgaattga gaaccttcac 240
aaaaaaaaat gtctgcctag agacagatta ggtccttcag ctccagtgct gattggttcc 300
tttccaaagg accatccaat cctgccacgc agggaaacat ccacaggttt ttattctttc 360
tgccaggtac atcagatcca tcaggtccaa gctgtgttga ctaccactac ttttcccttc 420
gtctcaatta tgtcttggaa gaaggctttg cggatccctg gaggccttcg ggtagcaact 480
gtgaccttga tgctggcgat gctgagcacc ccggtggctg agggcagaga ctctcccggt 540
aagtgcaggg ccactgctct ccagagccgc cactctggga acaggctctc cttgggctgg 600
ggtaggggga tggtgatctc catgatctcg gacacaatct ttcatcaaca tttcctctct 660
ttggggaaag agaacgatgt tgcattccca tttatctttt agtgatgagg tgagcacagt 720
cggatcccca tcctacaggc ttaagcctgg aagagaagga gagaggagag gaaagaggag 780
acaaagtgta catttactac cagtgacagg acaaagtgag catggggtta tttttgaaga 840
tatgaatttc tccagagaca cagcaggatt tgtcatttag gcgtgcccca agactttgcc 900
tggactaaat attatgggat cctgcattgg gaaatgtaag gcagcaatgg tgtctgtagt 960
ctccgtattt gaggaaaagt tgtctgtatt cctgactgac tggagcgttt gtggaggcaa 1020
aatcttggta ctgaaggaag ctgactggat gaccacagac agggagtctt caggtttcac 1080
tgatttatgg gcaaatggtg acttgagtgg gattcagaga cccgagttgg tggactgaat 1140
ttagcagaaa ggaggatgta aagaagggaa ataacatata ttgtgaaacc actcatttca 1200
gacacagcac aatactttac ataaattctc tctcactcct tctaacatcc tgtgtgtaga 1260
tatcatgatt ttcttttaca caattatact tgtgatatgg atattctgtt acatacctgc 1320
cctagctggt gactgccaca gcttaattgg aatctagttt atcaaattca aaagcttgtg 1380
ctctttccat gaataaatgt ttctttctag gactcggagg tgtaggtcct ttctaacata 1440
aaagtgagtg aacctcacat ggcattcgga agggtaaatc caggcatggg aagggaggta 1500
ttttaccgag ggaccaagag aatacgcata tcagaacgag gacaggctta atttctggac 1560
ccgtctcatc attcccttga actcccaggt ttatgtggat aattttatct ctgaggtttc 1620
caggagctca atggaaaatg ggatttcatg cgagagcgcc ctgattccct ctaagtgcag 1680
aggtctatgt aaaatcagcc cgactgcctc ttccctcggt tcacaggctc cggcagggac 1740
agggctttcc gccctttcct gcctgcagga aggcggattc cggaagcccc cagagagggc 1800
gggcagggct gggcagggct gggcagagcc gccgggcgga tcacaagtct ggagcgccag 1860
gcacgggcgg gcgggaactg gaggtcgcgc gggcggttcc acagctccgg gccgggtcag 1920
ggcggcggct gcgggggcgg ccgggctggg gccgggccgg ggcctgactg accggccggt 1980
gattccccgc agaggatttc gtgttccagt ttaagggcat gtgctacttc accaacggga 2040
ccgagcgcgt gcggggtgtg accagataca tctataaccg agaggagtac gcgcgcttcg 2100
acagcgacgt gggggtgtat cgggcggtga cgccgctggg gcggcttgac gccgagtact 2160
ggaatagcca gaaggacatc ctggaggagg accgggcgtc ggtggacacc gtatgcagac 2220
acaactacca gttggagctc cgcacgacct tgcagcggcg aggtgagcgt cgtcgcccgt 2280
ctgcgaggcc catccttggc aggggcccag agtctctgcg ccaggagggg cgaagggggc 2340
gcggcctctg gaacctgagc cttgttcgtt ccaccccggc tgacaggagg cggcggtggg 2400
ggtgctgggg gctggtgcat cggaggggca gggacctagg gcagagcagg gggacaggca 2460
gagttggtca agctgcctag tttcgcccca tcctccccgt ccgtcggcct cgccctctgc 2520
tctgcacgtt cttgcctcgt gccttatgcg tttgcctcct cgtgccttac ctttactaag 2580
cagttctctc tgcccccaat ttccgccctc ttcccctgcc cgcccgcccg gctagcactg 2640
ccgcacccgg caaggtccac ctacacagct catgcagtgg gaagcttcag acttggcctg 2700
atggagttag ggctgcccca caactgcgcg cagggcatcc agcaattaca gttgtcaaat 2760
aagatatttt gatttttgac ttcaaattat tattcatcgt aattctgttt tcttaaatgg 2820
ctctcattca tggcggagct ctttgagatg agagtgtttt aatcattgca tgcctggtat 2880
ctgacacatt gactggcatg tggtatgagc tcaatgatct tctgttaaat taatgaataa 2940
atgtgctcag ctgccaatcc acttaggctc aagggaaagc agaggataaa tagagcctta 3000
aaaatggact tttattaatt attttctgtc attttgctta attctttaaa gtaaactctt 3060
attgacttga atcttaatag agtttgtgaa tacaaagtct gaggaaaaaa gtgtttgcta 3120
aaaataaaaa caacacttga atgatgtttg taaggcagtt ttaatttctt agaaaagctg 3180
aacaaatggc acaatgcaaa gagcagaagt tttggaataa atagattgaa gcaattaaat 3240
tattggataa aaatagtttc aggttgcttt tggcttaggt tctcccctcc ccccatcact 3300
atccacttca ggaataaaca ttctgaaagt caattttacc catttagtga gcacttattt 3360
ctagacagtt accttatcaa ataccatcta tgttacgtca tttaatctca cagttgcctg 3420
tgcattaggg attagcatca ccactttata tatcctaata ttagtacatg ataaacactt 3480
taagtaatca gcccacaagt actcaccaag accttaagcc tcccaaagta cacaatattc 3540
tttatgttct tcactacaca tctatagagt caaagggaca caaagccttg ttaaagccag 3600
ttttgactag aagcagcaat gagtctcatc ctgtttgatc tccatgttaa tgggacaaaa 3660
tgatactttc aaggcattga aaatttatga ttaatcaatc cctagtctga ctccagtgtt 3720
acctatgcag attcacaaaa cttttagttt actttacact cccttgcctt cttttgactc 3780
acatcgtagt gccagcaagt acttacattt ttgctatttt ggttctattt ccataaaatt 3840
tattttatca tcttttctca taaatttgtg ccctctattt tactcccagt ctgtgtaaga 3900
tgaacaaatc ttataaggcc acatagctga ctgtgatttc aggtggactc caggaaggag 3960
aaccaaagaa aagttcaagt ccaagcagaa accgtgattc cttccggatg atggctcaag 4020
agtgcctttt aattggggtg caacctgctg acctcagcaa atctcagcta tatttatatg 4080
ttcacattac aggctcatta acctaggctg atctctgcaa ggatctcaga atattttcta 4140
cagataacat acatgataat atctgatttc aggacaaaaa agtaattctc aatagcaagg 4200
gaatggagta gggtagacag ctagtaatta aactcacttg tatgttaaaa ataaattaag 4260
gaaaaaaaga aaatgagaga acatattact aaataaagaa agcatacatt aaatatttac 4320
tatagtttca cactaagaga ataaaggaaa tgcaataaag tggcctgaaa gataaaggat 4380
gagatgtgta aagagacagg gaaagatgtg tcattttttt actatgagca gcagtctgag 4440
aagataaagg aatcgagtta tgggcaaaca tgatgtttga tcagtgctat ttgttttgaa 4500
ggcctgccta cttttgtttc aaatattaca gacttttgaa atcacattct ttttgttttt 4560
tgctgtctgt tactagatcg cacattctgt aaaggcaggg accatggtat gttgtttatc 4620
tttggattct cagtgattgt catatttata tttgttgaat gaatcttaat ccaagacttg 4680
gactccaggt atctttccac tctggttcca aggagggacc attcccaatg gtagacgtgc 4740
tgtgtggtct cacatctcac tcctgtcttt tcctgtctgt tactgccctc agtggagccc 4800
acagtgacca tctccccatc caggacagag gccctcaacc accacaacct gctggtctgc 4860
tcagtgacag atttctatcc agcccagatc aaagtccggt ggtttcggaa tgaccaggag 4920
gagacaactg gcgttgtgtc cacccccctt attaggaacg gtgactggac cttccagatc 4980
ctggtgatgc tggaaatgac tccccagcgt ggagacgtct acacctgcca cgtggagcac 5040
cccagcctcc agaaccccat catcgtggag tggcgtaagg ggatattgag tttctgttac 5100
tatgggcccc acaagacaaa gggcagagct ccttctgacc cattccttcc catctcttat 5160
ccctgatgtc actactgagc tggggatcac aggagactag agcacctctt gctccatggc 5220
aagtgcatca gaagaatcct gatctcatca cctttccaga tgctagggaa attattctat 5280
gtactgtttc tccagatccc agtcctgata gctcggaggg actgattatt agggctggtg 5340
actgggatct tagggtttaa ggtatggatg agttcctgag gagtggagat ctgcttcccc 5400
gctctctcac ctactcactg taccgaagga cctattggct ggctttcccc tcccttaggg 5460
gtggtctgaa tggaggacta ggttcctttg acactttcac ctcctgcatc tcagactgga 5520
cttcagctcc tcagcaggga tgctatgggg tgtagggaca aacactgaca ctcaggctct 5580
gcttcttagg ggctcagtct gaatctgccc agagcaagat gctgagtggc attggaggct 5640
tcgtgctggg gctgatcttc ctcaggctgg gccttattat ccatcacagg agtcagaaag 5700
gtgaggaacc ccaagggaaa aggggaagat gggctgtgac ccagaccctc tgttcaggga 5760
ggtcctgtct ctagatgtgg ctctttcctc ctgaccctga gaggaagaaa actgagctgg 5820
aggtgggagg agacaggaca agattggagg aggcattact agctgaaagg tagccctgtc 5880
acacaggtga ctgatagagc ttattccagg atgtacttac tgttcatcgt ctcattggct 5940
cctttccaaa agcttcctcc attaagaggg tcagagcctt ggcctccttg ccttctagtg 6000
acaatttcct ttgttttagg ggattttaaa ttagggtact taaggccttg aagaacatga 6060
gtggtaagag aatataactc taattaagtc acatgtgtca ttttcctttg gggtgagaga 6120
gtggctgttt gtgtaatgag acctttctct gcataacttc cttttgtaag acctcaaggg 6180
cctccaccag caggtgatat ttcagccatg agccagtgtg ggggggcaca ggtgtaagag 6240
ggaagagcat gagctgaatg cacctgacca caatggtctc tgttcatggt atatttgctg 6300
ctatgaggat caagacttag ggtcgaagtt tgccagtttc taggaatctc cagaggttgt 6360
tccccagaac caagccttaa ctttggtggt atcttcttgt gaaatgtgaa gccagaacca 6420
cagcttaaat gttagacaag aggatgatgc ccactttgtg ccacatgttg gtggctactg 6480
cctgtaggca ttttccagtg actgaaagag gctgctagtg gtagggatga ggtatcatcc 6540
aattttctaa aaagattgaa cccttcatat tccccagaag agtaacagct gttccgccac 6600
ttcccacata tctgcatcaa gctgaagttc tgtgtcctca cgagctgatt tcacctttgc 6660
acagatcttg cgggaggtga cgataataca ttctggacct cagctttctc tgtctgaagc 6720
tgcagggggc ccctgagggg tgggggagat tgcaggccca ccagcgtacc ctgtgctgat 6780
catccctctt ctctcttctt cagggctcct gcactgactc ctgagactat tttaactggg 6840
attggttatc acttttctgt aacgcctgct tgtccctgcc cagaattccc agctgcctgt 6900
gtcagcctgt ccccctgaga tcagagtcct acagtggctg tcacgcagcc accaggtcat 6960
ctcctttcat ccccacctcg aggctgatgg ctgtgaccct gcttcctgca cttacccaga 7020
gcctctgcct gtgcacggcc agctgcgtct actgaggccc caaggggttt ctgtttctat 7080
tctctcc 7087
//