Dbfetch

ID   OU242050; SV 1; linear; genomic DNA; STD; HUM; 7087 BP.
XX
AC   OU242050;
XX
PR   Project:PRJEB45878;
XX
DT   25-AUG-2021 (Rel. 144, Created)
DT   25-AUG-2021 (Rel. 144, Last updated, Version 1)
XX
DE   Homo sapiens HLA-DQB1 gene for MHC class II antigen, allele HLA-DQB1*04:51
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RA   Lucas J., Lucas AM J.;
RT   ;
RL   Submitted (23-JUN-2021) to the INSDC.
RL   ANTHONY NOLAN RESEARCH INSTITUTE, 77C Fleet Road, London, NW3 2QU, United
RL   Kingdom
XX
DR   MD5; d44647757eb305cb292d992891bbfdbe.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..7087
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone="AN300721"
FT                   /db_xref="taxon:9606"
FT   CDS             join(430..538,1993..2262,4793..5074,5590..5700,6170..6193,
FT                   6804..6817)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /product="MHC class II antigen"
FT                   /function="antigen presenting molecule"
FT                   /protein_id="CAG7468611.1"
FT                   /translation="MSWKKALRIPGGLRVATVTLMLAMLSTPVAEGRDSPEDFVFQFKG
FT                   MCYFTNGTERVRGVTRYIYNREEYARFDSDVGVYRAVTPLGRLDAEYWNSQKDILEEDR
FT                   ASVDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW
FT                   FRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRA
FT                   QSESAQSKMLSGIGGFVLGLIFLRLGLIIHHRSQKGPQGPPPAGLLH"
FT   exon            430..538
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=1
FT   intron          539..1992
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=1
FT   exon            1993..2262
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=2
FT   intron          2263..4792
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=2
FT   exon            4793..5074
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=3
FT   intron          5075..5589
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=3
FT   exon            5590..5700
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=4
FT   intron          5701..6169
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=4
FT   exon            6170..6193
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=5
FT   intron          6194..6803
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=5
FT   exon            6804..6817
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*04:51"
FT                   /number=6
XX
SQ   Sequence 7087 BP; 1785 A; 1640 C; 1717 G; 1945 T; 0 other;
     gaaatatgat ccccacttaa tttgccctac tgaaagaatc ccaagtataa aaacaaccag        60
     tttttaatca atattacaaa gatgtttact gttgaatcgc atttttcttt ggcttcttaa       120
     aatcccttag gcattcaatc ttcagctctt ctataattga gaggaagttt tcacctcaaa       180
     tgttcatcca gtgcaatttg aagacgtcac agtgccaggg actgaattga gaaccttcac       240
     aaaaaaaaat gtctgcctag agacagatta ggtccttcag ctccagtgct gattggttcc       300
     tttccaaagg accatccaat cctgccacgc agggaaacat ccacaggttt ttattctttc       360
     tgccaggtac atcagatcca tcaggtccaa gctgtgttga ctaccactac ttttcccttc       420
     gtctcaatta tgtcttggaa gaaggctttg cggatccctg gaggccttcg ggtagcaact       480
     gtgaccttga tgctggcgat gctgagcacc ccggtggctg agggcagaga ctctcccggt       540
     aagtgcaggg ccactgctct ccagagccgc cactctggga acaggctctc cttgggctgg       600
     ggtaggggga tggtgatctc catgatctcg gacacaatct ttcatcaaca tttcctctct       660
     ttggggaaag agaacgatgt tgcattccca tttatctttt agtgatgagg tgagcacagt       720
     cggatcccca tcctacaggc ttaagcctgg aagagaagga gagaggagag gaaagaggag       780
     acaaagtgta catttactac cagtgacagg acaaagtgag catggggtta tttttgaaga       840
     tatgaatttc tccagagaca cagcaggatt tgtcatttag gcgtgcccca agactttgcc       900
     tggactaaat attatgggat cctgcattgg gaaatgtaag gcagcaatgg tgtctgtagt       960
     ctccgtattt gaggaaaagt tgtctgtatt cctgactgac tggagcgttt gtggaggcaa      1020
     aatcttggta ctgaaggaag ctgactggat gaccacagac agggagtctt caggtttcac      1080
     tgatttatgg gcaaatggtg acttgagtgg gattcagaga cccgagttgg tggactgaat      1140
     ttagcagaaa ggaggatgta aagaagggaa ataacatata ttgtgaaacc actcatttca      1200
     gacacagcac aatactttac ataaattctc tctcactcct tctaacatcc tgtgtgtaga      1260
     tatcatgatt ttcttttaca caattatact tgtgatatgg atattctgtt acatacctgc      1320
     cctagctggt gactgccaca gcttaattgg aatctagttt atcaaattca aaagcttgtg      1380
     ctctttccat gaataaatgt ttctttctag gactcggagg tgtaggtcct ttctaacata      1440
     aaagtgagtg aacctcacat ggcattcgga agggtaaatc caggcatggg aagggaggta      1500
     ttttaccgag ggaccaagag aatacgcata tcagaacgag gacaggctta atttctggac      1560
     ccgtctcatc attcccttga actcccaggt ttatgtggat aattttatct ctgaggtttc      1620
     caggagctca atggaaaatg ggatttcatg cgagagcgcc ctgattccct ctaagtgcag      1680
     aggtctatgt aaaatcagcc cgactgcctc ttccctcggt tcacaggctc cggcagggac      1740
     agggctttcc gccctttcct gcctgcagga aggcggattc cggaagcccc cagagagggc      1800
     gggcagggct gggcagggct gggcagagcc gccgggcgga tcacaagtct ggagcgccag      1860
     gcacgggcgg gcgggaactg gaggtcgcgc gggcggttcc acagctccgg gccgggtcag      1920
     ggcggcggct gcgggggcgg ccgggctggg gccgggccgg ggcctgactg accggccggt      1980
     gattccccgc agaggatttc gtgttccagt ttaagggcat gtgctacttc accaacggga      2040
     ccgagcgcgt gcggggtgtg accagataca tctataaccg agaggagtac gcgcgcttcg      2100
     acagcgacgt gggggtgtat cgggcggtga cgccgctggg gcggcttgac gccgagtact      2160
     ggaatagcca gaaggacatc ctggaggagg accgggcgtc ggtggacacc gtatgcagac      2220
     acaactacca gttggagctc cgcacgacct tgcagcggcg aggtgagcgt cgtcgcccgt      2280
     ctgcgaggcc catccttggc aggggcccag agtctctgcg ccaggagggg cgaagggggc      2340
     gcggcctctg gaacctgagc cttgttcgtt ccaccccggc tgacaggagg cggcggtggg      2400
     ggtgctgggg gctggtgcat cggaggggca gggacctagg gcagagcagg gggacaggca      2460
     gagttggtca agctgcctag tttcgcccca tcctccccgt ccgtcggcct cgccctctgc      2520
     tctgcacgtt cttgcctcgt gccttatgcg tttgcctcct cgtgccttac ctttactaag      2580
     cagttctctc tgcccccaat ttccgccctc ttcccctgcc cgcccgcccg gctagcactg      2640
     ccgcacccgg caaggtccac ctacacagct catgcagtgg gaagcttcag acttggcctg      2700
     atggagttag ggctgcccca caactgcgcg cagggcatcc agcaattaca gttgtcaaat      2760
     aagatatttt gatttttgac ttcaaattat tattcatcgt aattctgttt tcttaaatgg      2820
     ctctcattca tggcggagct ctttgagatg agagtgtttt aatcattgca tgcctggtat      2880
     ctgacacatt gactggcatg tggtatgagc tcaatgatct tctgttaaat taatgaataa      2940
     atgtgctcag ctgccaatcc acttaggctc aagggaaagc agaggataaa tagagcctta      3000
     aaaatggact tttattaatt attttctgtc attttgctta attctttaaa gtaaactctt      3060
     attgacttga atcttaatag agtttgtgaa tacaaagtct gaggaaaaaa gtgtttgcta      3120
     aaaataaaaa caacacttga atgatgtttg taaggcagtt ttaatttctt agaaaagctg      3180
     aacaaatggc acaatgcaaa gagcagaagt tttggaataa atagattgaa gcaattaaat      3240
     tattggataa aaatagtttc aggttgcttt tggcttaggt tctcccctcc ccccatcact      3300
     atccacttca ggaataaaca ttctgaaagt caattttacc catttagtga gcacttattt      3360
     ctagacagtt accttatcaa ataccatcta tgttacgtca tttaatctca cagttgcctg      3420
     tgcattaggg attagcatca ccactttata tatcctaata ttagtacatg ataaacactt      3480
     taagtaatca gcccacaagt actcaccaag accttaagcc tcccaaagta cacaatattc      3540
     tttatgttct tcactacaca tctatagagt caaagggaca caaagccttg ttaaagccag      3600
     ttttgactag aagcagcaat gagtctcatc ctgtttgatc tccatgttaa tgggacaaaa      3660
     tgatactttc aaggcattga aaatttatga ttaatcaatc cctagtctga ctccagtgtt      3720
     acctatgcag attcacaaaa cttttagttt actttacact cccttgcctt cttttgactc      3780
     acatcgtagt gccagcaagt acttacattt ttgctatttt ggttctattt ccataaaatt      3840
     tattttatca tcttttctca taaatttgtg ccctctattt tactcccagt ctgtgtaaga      3900
     tgaacaaatc ttataaggcc acatagctga ctgtgatttc aggtggactc caggaaggag      3960
     aaccaaagaa aagttcaagt ccaagcagaa accgtgattc cttccggatg atggctcaag      4020
     agtgcctttt aattggggtg caacctgctg acctcagcaa atctcagcta tatttatatg      4080
     ttcacattac aggctcatta acctaggctg atctctgcaa ggatctcaga atattttcta      4140
     cagataacat acatgataat atctgatttc aggacaaaaa agtaattctc aatagcaagg      4200
     gaatggagta gggtagacag ctagtaatta aactcacttg tatgttaaaa ataaattaag      4260
     gaaaaaaaga aaatgagaga acatattact aaataaagaa agcatacatt aaatatttac      4320
     tatagtttca cactaagaga ataaaggaaa tgcaataaag tggcctgaaa gataaaggat      4380
     gagatgtgta aagagacagg gaaagatgtg tcattttttt actatgagca gcagtctgag      4440
     aagataaagg aatcgagtta tgggcaaaca tgatgtttga tcagtgctat ttgttttgaa      4500
     ggcctgccta cttttgtttc aaatattaca gacttttgaa atcacattct ttttgttttt      4560
     tgctgtctgt tactagatcg cacattctgt aaaggcaggg accatggtat gttgtttatc      4620
     tttggattct cagtgattgt catatttata tttgttgaat gaatcttaat ccaagacttg      4680
     gactccaggt atctttccac tctggttcca aggagggacc attcccaatg gtagacgtgc      4740
     tgtgtggtct cacatctcac tcctgtcttt tcctgtctgt tactgccctc agtggagccc      4800
     acagtgacca tctccccatc caggacagag gccctcaacc accacaacct gctggtctgc      4860
     tcagtgacag atttctatcc agcccagatc aaagtccggt ggtttcggaa tgaccaggag      4920
     gagacaactg gcgttgtgtc cacccccctt attaggaacg gtgactggac cttccagatc      4980
     ctggtgatgc tggaaatgac tccccagcgt ggagacgtct acacctgcca cgtggagcac      5040
     cccagcctcc agaaccccat catcgtggag tggcgtaagg ggatattgag tttctgttac      5100
     tatgggcccc acaagacaaa gggcagagct ccttctgacc cattccttcc catctcttat      5160
     ccctgatgtc actactgagc tggggatcac aggagactag agcacctctt gctccatggc      5220
     aagtgcatca gaagaatcct gatctcatca cctttccaga tgctagggaa attattctat      5280
     gtactgtttc tccagatccc agtcctgata gctcggaggg actgattatt agggctggtg      5340
     actgggatct tagggtttaa ggtatggatg agttcctgag gagtggagat ctgcttcccc      5400
     gctctctcac ctactcactg taccgaagga cctattggct ggctttcccc tcccttaggg      5460
     gtggtctgaa tggaggacta ggttcctttg acactttcac ctcctgcatc tcagactgga      5520
     cttcagctcc tcagcaggga tgctatgggg tgtagggaca aacactgaca ctcaggctct      5580
     gcttcttagg ggctcagtct gaatctgccc agagcaagat gctgagtggc attggaggct      5640
     tcgtgctggg gctgatcttc ctcaggctgg gccttattat ccatcacagg agtcagaaag      5700
     gtgaggaacc ccaagggaaa aggggaagat gggctgtgac ccagaccctc tgttcaggga      5760
     ggtcctgtct ctagatgtgg ctctttcctc ctgaccctga gaggaagaaa actgagctgg      5820
     aggtgggagg agacaggaca agattggagg aggcattact agctgaaagg tagccctgtc      5880
     acacaggtga ctgatagagc ttattccagg atgtacttac tgttcatcgt ctcattggct      5940
     cctttccaaa agcttcctcc attaagaggg tcagagcctt ggcctccttg ccttctagtg      6000
     acaatttcct ttgttttagg ggattttaaa ttagggtact taaggccttg aagaacatga      6060
     gtggtaagag aatataactc taattaagtc acatgtgtca ttttcctttg gggtgagaga      6120
     gtggctgttt gtgtaatgag acctttctct gcataacttc cttttgtaag acctcaaggg      6180
     cctccaccag caggtgatat ttcagccatg agccagtgtg ggggggcaca ggtgtaagag      6240
     ggaagagcat gagctgaatg cacctgacca caatggtctc tgttcatggt atatttgctg      6300
     ctatgaggat caagacttag ggtcgaagtt tgccagtttc taggaatctc cagaggttgt      6360
     tccccagaac caagccttaa ctttggtggt atcttcttgt gaaatgtgaa gccagaacca      6420
     cagcttaaat gttagacaag aggatgatgc ccactttgtg ccacatgttg gtggctactg      6480
     cctgtaggca ttttccagtg actgaaagag gctgctagtg gtagggatga ggtatcatcc      6540
     aattttctaa aaagattgaa cccttcatat tccccagaag agtaacagct gttccgccac      6600
     ttcccacata tctgcatcaa gctgaagttc tgtgtcctca cgagctgatt tcacctttgc      6660
     acagatcttg cgggaggtga cgataataca ttctggacct cagctttctc tgtctgaagc      6720
     tgcagggggc ccctgagggg tgggggagat tgcaggccca ccagcgtacc ctgtgctgat      6780
     catccctctt ctctcttctt cagggctcct gcactgactc ctgagactat tttaactggg      6840
     attggttatc acttttctgt aacgcctgct tgtccctgcc cagaattccc agctgcctgt      6900
     gtcagcctgt ccccctgaga tcagagtcct acagtggctg tcacgcagcc accaggtcat      6960
     ctcctttcat ccccacctcg aggctgatgg ctgtgaccct gcttcctgca cttacccaga      7020
     gcctctgcct gtgcacggcc agctgcgtct actgaggccc caaggggttt ctgtttctat      7080
     tctctcc                                                                7087
//