Dbfetch
ID OU241996; SV 1; linear; genomic DNA; STD; HUM; 7090 BP. XX AC OU241996; XX PR Project:PRJEB45878; XX DT 25-AUG-2021 (Rel. 144, Created) DT 25-AUG-2021 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-DQB1 gene for MHC class II antigen, allele DE HLA-DQB1*03:02:01:10 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Lucas J., Lucas AM J.; RT ; RL Submitted (23-JUN-2021) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, 77C Fleet Road, London, NW3 2QU, United RL Kingdom XX DR MD5; 14e919e65fd119ea0b9bce89d1cbc9b9. XX FH Key Location/Qualifiers FH FT source 1..7090 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300667" FT /db_xref="taxon:9606" FT CDS join(430..538,1983..2252,4783..5064,5580..5690,6173..6196, FT 6807..6820) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAG7468557.1" FT /translation="MSWKKALRIPGGLRVATVTLMLAMLSTPVAEGRDSPEDFVYQFKG FT MCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTR FT AELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW FT FRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRA FT QSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGPQGPPPAGLLH" FT exon 430..538 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=1 FT intron 539..1982 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=1 FT exon 1983..2252 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=2 FT intron 2253..4782 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=2 FT exon 4783..5064 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=3 FT intron 5065..5579 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=3 FT exon 5580..5690 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=4 FT intron 5691..6172 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=4 FT exon 6173..6196 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=5 FT intron 6197..6806 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=5 FT exon 6807..6820 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:02:01:10" FT /number=6 XX SQ Sequence 7090 BP; 1791 A; 1641 C; 1708 G; 1950 T; 0 other; gaaatatgat ccccacttaa tttgccctac tgaaagaatc ccaagtataa aaacaaccag 60 tttttaatca atattacaaa gatgtttact gttgaatcgc atttttcttt ggcttcttaa 120 aatcccttag gcattcaatc ttcagctctt ctataattga gaggaagttt tcacctcaaa 180 tgttcatcca gtgcaatttg aagacgtcac agtgccaggg actggattga gaaccttcac 240 aaaaaaaaat gtctgcctag agacagatta ggtccttcag ctccagtgct gattggttcc 300 tttccaaagg accatccaat cctgccacgc agggaaacat ccacaggttt ttattctttc 360 tgccaggtac atcagatcca tcaggtccaa gctgtgttga ctaccactac ttttcccttc 420 gtctcaatta tgtcttggaa gaaggctttg cggatccctg gaggccttcg ggtagcaact 480 gtgaccttga tgctggcgat gctgagcacc ccggtggctg agggcagaga ctctcccggt 540 aagtgcaggg ccactgctct ccagagccgc cactctggga acaggctctc cttgggctgg 600 ggtaggggga tggtgatctc catgatctcg gacacaatct ttcatcaaca tttcctctct 660 ttggggaaag agaacgatgt tgcattccca tttatctttt agtgatgagg tgagcacagt 720 cggatcccca tcctacaggc ttaagcctgg aagagaagga gagaggagag gaaagaggag 780 acaaagtgta catttactac cagtgacagg acaaagtgag catggggtta tttttgaaga 840 tacgaatttc tccagagaca cagcaggatt tgtcatttag gcgtgcccca agactttgcc 900 tggactaaat attatgggat cctgcattgg gaaatgtaag gcagcaatgg tgtctgtagt 960 ctccgtattt gaggaaaagt tgtctgtatt cctgactgac tggagcgttt gtggaggcaa 1020 aatcttggta ctgaaggaag ctgactggat gaccacagac agggagtctt caggtttcac 1080 tgatttatgg gcaaatggtg acttgagtgg gattcagaga cccgagttgg tggactgaat 1140 ttagcagaaa ggaggatgta aagaagggaa ataacatata ttgtgaaacc actcatttca 1200 gacacagcac aatactttac ataaattctc tctcactcct tctaacatcc tgtgtgtaga 1260 tatcatgatt ttcttttaca caattatact tgtgatatgg atattctgtt acatacctgc 1320 cctagctggt gactgccaca gcttaattgg aatctagttt atcaaattca aaagcttgtg 1380 ctctttccat gaataaatgt ttctttctag gactcggagg tgtaggtcct ttctaacata 1440 aaagtgagtg aacctcacat ggcattcgga agggtaaatc caggcatggg aagggaggta 1500 ttttaccgag ggaccaagag aatacgcata tcagaacgag gacaggctta atttctggac 1560 ccgtctcatc attcccttga actcacaggt ttatgtggat aattttatct ctgaggtttc 1620 caggagctca atggaaaatg ggatttcatg cgagagcgcc ctgattccct ctaagtgcag 1680 aggtctatgt aaaatcagcc cgactgcctc ttccctcggt tcacaggctc cggcagggac 1740 agggctttcc gccctttcct gcctgcagga aggcggattc ccgaagcccc cagagagggc 1800 gggcagggct gggcagagcc gccgggcgga tcacaagtct ggagcgccag gcacgggcgg 1860 gcgggaactg gaggtcgcgc gggcggttcc acagctccgg gccgggtcag ggcggcggct 1920 gcgggggcgg ccgggctggg gccgggccgg ggcctgactg accggccggt gattccccgc 1980 agaggatttc gtgtaccagt ttaagggcat gtgctacttc accaacggga cggagcgcgt 2040 gcgtcttgtg accagataca tctataaccg agaggagtac gcacgcttcg acagcgacgt 2100 gggggtgtat cgggcggtga cgccgctggg gccgcctgcc gccgagtact ggaacagcca 2160 gaaggaagtc ctggagagga cccgggcgga gttggacacg gtgtgcagac acaactacca 2220 gttggagctc cgcacgacct tgcagcggcg aggtgagcgt cgtcgcccgt ctgcgaggcc 2280 catccttggc aggggcccag agtctctgcg ccaggagggg cgaagggggc gcggcctctg 2340 gaacctgagc cttgttcgtt ccaccccggc tgacaggagg aggcggtggg ggtgctgggg 2400 gctggtgcat cggaggggca gggacctagg gcagagcagg gggacaggca gagttggtca 2460 agctgcctag tttcgcccca tcctccccgt ccgtcggcct cgccctctgc tctgcacgtt 2520 cttgcctcgt gccttatgcg tttgcctcct cgtgccttac ctttactaag cagttctctc 2580 tgcccccaat ttccgccctc ttcccctgcc cgcccgcccg gctagcactg ccgcacccgg 2640 caaggtccac ctacacagct catgcagtgg gaagcttcag acttggcctg atggagttag 2700 ggctgcccca caactgcgcg cagggcatcc agcaattaca gttgtcaaat aagatatttt 2760 gacttttgac ttcaaattat tattcatcgt aattctgttt tcttaaatgg ctctcattca 2820 tggcggagct ctttgagatg agagtgtttt aatcattgca tgcctggtat ctgacacatt 2880 gactggcatg tggtatgagc tcaatgatct tctgttaaat taatgaataa atgtgctcag 2940 ctgccaatcc acttaggctc aagggaaagc agaggataaa tagagcctta aaaatggact 3000 tttattaatt attttctgtc attttgctta attctttaaa gtaaactctt attgacttgg 3060 atcttaatag agtttgtgaa tacaaagtct gaggaaaaaa gtgtttgcta aaaataaaaa 3120 caacacttga atgatgtttg taaggcagtt ttaatttctt agaaaagctg aacaaatggc 3180 acaatgcaaa gagcagaagt tttggaataa atagattgaa gcaattaaat tattggataa 3240 aaatagtttc aggttgcttt tggcttaggt tctcccctcc ccccatcact atccacttca 3300 ggaataaaca ttctgaaagt caattttacc catttagtga gcacttattt ctagacagtt 3360 accttatcaa ataccgtcta tgttacgtca tttaatctca cagttgcctg tgcattagag 3420 attagcatca ccactttata tatcctaata ttagtacatg acaaacactt taagtaatca 3480 gcccacaagt actcaccaag accttaagcc tcccaaagta cacaatattc tttatgttct 3540 tcactacaca tctatagagt caaagggaca taaagccttg ttaaagccag ttttgactag 3600 aagcagcaat gagtctcttc ctgtttgatc tccatgttaa tgggacaaaa tgatactttc 3660 aaggcattga aaatttatga ttaatcaatc cctagtctga ctccagtgtt acctatgcag 3720 attcacaaaa cttttagttt actttaaact cccttgcctt cttttgactc acatcgtagt 3780 gccagcaagt acttacattt ttgctatttt ggttctattt ccataaaatt tattttatca 3840 tcttttctca taagtttgtg ccctctattt tactcccagt ctgtgtaaga tgaacaaatc 3900 ttataaggcc acatagctga ctgtgatttc aggtggactc caggaaggag aaccaaagaa 3960 aagttcaagt ccaagcagaa accgtgattc cttccggatg atggctcaag agtgcctttt 4020 aattggggtg caacctgctg acctcagcaa atctcagcta tatttatatg ttcacattac 4080 aggctcatta acctaggctg atctctgcaa ggatctcaga atattttcta cagataacat 4140 acatgataat atctgatttc aggacaaaaa agtaattctc aatagcaagg gaatggagta 4200 gggtagacag ctagtaatta aactcacttg tatgttaaaa ataaattaag gaaaaaaaga 4260 aaatgagaga acatattact aaataaagaa agcatacatt aaatatttac tatagtttca 4320 cactaagaga ataaaggaaa tgcaataaag tggcctgaaa gataaaggat gagacgtgta 4380 aagagacagg gaaagatgtg tcattttttt actatgagca gcagtctgag aagataaagg 4440 aatcgagtta tgggcaaaca tgatgtttga tcagtgttat ttgttttgaa ggcctgccta 4500 cttttgtttc aaatattaca gacttttgaa atcacattct ttttgttttt tgctgtctgt 4560 tactagatcg cacattctgt aaaggcaggg accatggtat gttgtttatc tttggattct 4620 cagtgattgt catatttata tttgttgaat gaatcttaat ccaagacttg gactccaggt 4680 atctttccac tctggttcca aggagggacc attcccaatg gtagacgtgc tgtgtggtct 4740 cacatctcac tcctgtcttt tcctgtctgt tactgccctc agtggagccc acagtgacca 4800 tctccccatc caggacagag gccctcaacc accacaacct gctggtctgc tcagtgacag 4860 atttctatcc agcccagatc aaagtccggt ggtttcggaa tgaccaggag gagacaactg 4920 gcgttgtgtc cacccccctt attaggaacg gtgactggac cttccagatc ctggtgatgc 4980 tggaaatgac tccccagcgt ggagacgtct acacctgcca cgtggagcac cccagcctcc 5040 agaaccccat catcgtggag tggcgtaagg ggatattgag tttctgttac tatgggcccc 5100 acaagacaaa gggcagagct ccttctgacc cattccttcc catctcttat ccctgatgtc 5160 actactgagc tggggatcac aggagactag agcacctctt gctccatggc aagtgcatca 5220 gaagaatcct gatctcatca cctttccaga tgctagggaa attattctac gtactgtttc 5280 tccagatccc agtcctgata gctcggaggg acttattatt agggctggtg actgggatct 5340 tagggtttaa ggtatggatg agttcctgag gagtggagat ctgcttcccc gctctctcac 5400 ctactcacta taccgaagga cctattggct ggctttcccc tcccttaggg gtggtctgaa 5460 tggaggacta ggttcctttg acactttcac ctcctgcatc tcagactgga cttcagctcc 5520 tcagcaggga tgctatgggg tgtagggaca aacgctgaca ctcaggctct gcttcttagg 5580 ggctcagtct gaatctgccc agagcaagat gctgagtggc attggaggct tcgtgctggg 5640 gctgatcttc ctcgggctgg gccttattat ccatcacagg agtcagaaag gtgaggaacc 5700 ccaagggaaa aggggaagat gggctgtgac ccagaccctc tgttcaggga ggtcctgtct 5760 ctagatgtgg ctctttcctc ctgaccctga gaggaagaaa actgagctgg aggtgggagg 5820 agacaggaca agattggagg aggcattgga atctgatttt actagttgaa aggtagccct 5880 gtcacacagg tgactgatag agcttattcc aggatatact taccattcat catctcattg 5940 gctcctttcc aaaagcttcc tccattaaga gggtcagagc cttggcctcc ttgccttcta 6000 gtgacaattt tctttgtttt aggggatttt aaattagggt acttaaggcc ttgaagaaca 6060 tgagtggtaa gagaatataa ctctaattaa gtcacatgtg tcattttcct ttggggtgaa 6120 agagtggctg tttgtgtaat gagacctttc tctgcataac ttccttttgt aagacctcaa 6180 gggcctccac cagcaggtga tatttcagcc atgagccagt gtgggggggc acaggtgtaa 6240 gagggaagag catgagctga atgcacctga ccacaatggt ctctgttcat ggtatatttg 6300 ctgctatgag gatcaagact tagggtcgaa gtttgccagt ttctaggaat ctccagaggt 6360 tgttccccag aaccaagcct taactttggt ggtatcttct tgtgaaatgt gaagccagaa 6420 ccacagctta aatgttagac aagaggatga ttcccacttt gtgccacatg ttggtggcta 6480 ctgcctgtag gcattttcca gtgactgaaa gaggctgcta gtggtaggga tgaggtatca 6540 tccaattttc taaaaagatt gaacccttca tattccccag aagagtaaca gctgttccgc 6600 cacttcccac atatctgcat caagctgaag ttctgtgtcc tcacgagctg atttcacctt 6660 tgcacagatc ttgcgggagg tgacaataat acattctgga cctcagcttt ctctgtctga 6720 agctgcaggg ggcccctgag gggtggggga gattgcaggc ccaccagcgt accctgtgct 6780 gatcatccct cttctctctt cttcagggct cctgcactga ctcctgagac tattttaact 6840 gggattggtt atcacttttc tgtaacgcct gcttgtccct gcccagaatt cccagctgcc 6900 tgtgtcagcc tgtccccctg agatcagagt cctacagtgg ctgtcacgca gccaccaggt 6960 catctccttt catccccacc tcgaggctga tggctgtgac cctgcttcct gcacttaccc 7020 agagcctctg cctgtgcacg gccagctgcg tctactgagg ccccaagggg tttctgtttc 7080 tattctctcc 7090 //