Dbfetch
ID OU241971; SV 1; linear; genomic DNA; STD; HUM; 7441 BP. XX AC OU241971; XX PR Project:PRJEB45878; XX DT 25-AUG-2021 (Rel. 144, Created) DT 25-AUG-2021 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens HLA-DQB1 gene for MHC class II antigen, allele DE HLA-DQB1*02:02:01:03 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RA Lucas J., Lucas AM J.; RT ; RL Submitted (23-JUN-2021) to the INSDC. RL ANTHONY NOLAN RESEARCH INSTITUTE, 77C Fleet Road, London, NW3 2QU, United RL Kingdom XX DR MD5; c00180bebd5e7cd5ee7ca0ee29173f23. XX FH Key Location/Qualifiers FH FT source 1..7441 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /clone="AN300597" FT /db_xref="taxon:9606" FT CDS join(426..534,1973..2242,5129..5410,5927..6037,6523..6546, FT 7158..7171) FT /codon_start=1 FT /transl_table=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /product="MHC class II antigen" FT /function="antigen presenting molecule" FT /protein_id="CAG7468532.1" FT /translation="MSWKKALRIPGGLRAATVTLMLSMLSTPVAEGRDSPEDFVYQFKG FT MCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKR FT AAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW FT FRNGQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA FT QSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGPQGPPPAGLLH" FT exon 426..534 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=1 FT intron 535..1972 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=1 FT exon 1973..2242 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=2 FT intron 2243..5128 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=2 FT exon 5129..5410 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=3 FT intron 5411..5926 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=3 FT exon 5927..6037 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=4 FT intron 6038..6522 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=4 FT exon 6523..6546 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=5 FT intron 6547..7157 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=5 FT exon 7158..7171 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*02:02:01:03" FT /number=6 XX SQ Sequence 7441 BP; 1872 A; 1737 C; 1778 G; 2054 T; 0 other; gaaatatgat ccccacttaa tttgccctat tgaaagaatc ccaagtataa gaacaactgg 60 tttttaatca atattacaaa gatgtttact gttgaatcgc atttttcttt ggcttcttaa 120 aatcccttag gcattcaatc ttcagctctt ccataattga gaggaaattt tcacctcaaa 180 tgttcatcca gtgcaattga aagacgtcac agtgccaggc actggattca gaaccttcac 240 acaaaaaaaa tctgcccaga gacagatgag gtccttcagc tccagtgctg attggttcct 300 ttccaaggga ccatccaatc ctaccacgca tggaaacatc cacagatttt tattctttct 360 gccaggtaca tcagatccat caggtccgag ctgtgttgac taccactttt cccttcgtct 420 caattatgtc ttggaaaaag gctttgcgga tccccggagg ccttcgggca gcaactgtga 480 ccttgatgct gtcgatgctg agcaccccag tggctgaggg cagagactct cccggtaagt 540 gcagggcagc tgctctccag agccgctact ctgggaacag gctctccttg ggctggggta 600 cggggatggt gatctccata atctcggaca caatctttta tcaacatttc ctctgttttg 660 ggaaagagag ctatgttgca tttccattta tcttttaatg atgaagtgag gacaatccaa 720 tcccatccta caggcttaag cctggaagag gaggagagag gagagaaaag aggagacaaa 780 gtgttcattt actaccagtg ataggacaaa gtgagcatgg ggttattttt gaagatatga 840 atttctccaa agacacagca ggatttgcca tttaggcgtg tcccaagact tgcctggact 900 aaatattatg atttcctgca ttgggaaatg caaggcagca atggtgtctg tagtctccgt 960 atttggggaa aagttgtctg tattcctgac ccagtggagc gtttgtggag gcaaaatctt 1020 ggtactgagg gaagctgact ggctgaccac agaaagagag ccttcaggtt tcactgattt 1080 atgggcaaat ggtgacctga gtgggattca gatacccgag ttgatgatgg actaaattta 1140 gtagaaagga ggatgtaaag aagggaaata acacatactg tgaaaccact catttcagac 1200 acagaacaat actttacata aattctctct cactccttct aacatcctgt gtgtagatat 1260 catgattttc ttttacacaa ttatacttgt gatatggata ttctgttaca taacctgccc 1320 gggctggtga ctgccacagt ttaatgggaa tctagtttat caaattcaaa agcttgtgct 1380 ctttcggtga ataaatgttt ctttctagga ctcagagatc taggactccc ttctttctaa 1440 cacagaagtg agtgaacctc acagggcact tgggagggta aatccaggca tgggaaggaa 1500 ggtattttac ccagggacca agagaatagg cgtatcggaa gaggacaggt ttaattcctg 1560 gacctgtctc gtcattccct tgaactgtca ggtttatgtg gataacttta tctctgaggt 1620 acccaggagc tccatggaaa atgagatttc atgcgagaac gccctgatcc ctctaagtgc 1680 agaggtccat gtaaaatcag cccgactgcc tcttcacttg gttcacaggc cgagacaggg 1740 acagggcttt cctccctttc ctgcctttag gaaggcggat tcccgaagac ccccgagagg 1800 gcgggcaggg ctgggcagag ccgccgggag gatcccaggt ctgcagcgcg aggcacgggc 1860 cggcgggaac ttgtggtcgc gcgggctgtt ccacagctcc gggccgggtc agggtggcgg 1920 ctgcgggggc ggacgggctg ggccgcactg actggccggt gattcctcgc agaggatttc 1980 gtgtaccagt ttaagggcat gtgctacttc accaacggga cagagcgcgt gcgtcttgtg 2040 agcagaagca tctataaccg agaagagatc gtgcgcttcg acagcgacgt gggggagttc 2100 cgggcggtga cgctgctggg gctgcctgcc gccgagtact ggaacagcca gaaggacatc 2160 ctggagagga aacgggcggc ggtggacagg gtgtgcagac acaactacca gttggagctc 2220 cgcacgacct tgcagcggcg aggtgagcgg cgtcgcccct ctgcgaggcc cacccttggc 2280 cccaagtctc tgcgccagga ggggcgaagg gtcgttgcct ctggaacctg agccccgttt 2340 gttccacccc agaggacagg aggcagcggc gagagtggtg ggggcaggtg catcggaggt 2400 gcggggacct agggcagagc agggggacag gcagagttgg ccaggctgcc tagtgtcgcc 2460 ccagcctacc cgttcgtcgg ccttgtcctc tgctctgcat gttcttgcct cgtgccttat 2520 gcatttgcct ccttttgcct tacctttgct aagcagctct ctctgctcag aatgcccgcc 2580 ctcttcccct gcccgcccgc ccgccccgct agcactgccc cacccagcaa ggcccacgtg 2640 cacagctctt gcagcaggaa gcttcaggct tagcctggtg gagttagggc tgttccacaa 2700 ctgcgcgcag gacatccagc aattacagtt gtgaaataag atattttaac ttttggcttc 2760 aaatcattat tcatcgtaat tctgttttct taaatggctc tcattcatgg cagagatctt 2820 tgaggtgagg gtgttttaat cattgcatgc ctagtacctg acacattgac tggtatgtgg 2880 tgtgagctca atgatcttct gttaaattaa tgaataaatg tactcagctg cccatccact 2940 taggctcaag aaaaaaaaag aggtaaacag agccttaaaa atggacttta ttaattattt 3000 tctataattt tgcttaatgc tttaaagtaa actcttattg acttggatct taatagagtt 3060 tgtgaataca aaatctgagg aaaaaagttt ttgctaaaaa taaaaacaac gcttgaaaga 3120 tattgtaatg cagtttaaat ttcttttctt tttttttttt ttttttgaga cggattctca 3180 ctctgtcgcc caggccggag tgcagtggcg cgatctcggc tcactgcaag ctccgcctcc 3240 cgggttcacg ccattctcct gcctcagcct cctgagtagg tgggattaca ggcgcgtgcc 3300 accacgcccg gctaattttt ttgtattttt agtagaggcg gggtttcacc gtgttagcca 3360 ggatggtctg gatctcctga cctcatgatc cgcccgcctc ggcctcccaa agtgctggga 3420 ttacaggtgt gagccacagt gcccggccgg cacttttaat ttcttagaaa agctgaacaa 3480 atggcacaat gcaaagagca aaagttttgg aataaataga ttgaagccat taaattattg 3540 gataaaaata gtttcgggtt gcttttggcc taggttctcc cctcccccca tgactatcca 3600 cttcaggaat aaacattctg aaagtcaatt ttacccattt agtgagcatt tatttctaga 3660 cagttgcctt atcaaatacc atctatgtta cgtcatttaa tctcacagtt acttgtgcat 3720 cagagattag catcaccact ttatatattg gtacatgata aacactttat tggtcatgga 3780 tggggagatg gtcactgtag gctaatattg gtacatgata aacactttaa gtaatcagcc 3840 cataattgct caccaagacc ttaagcctcc caaagtacac aacattcttt gtgttcttca 3900 ctacacatcc atagagtcta agggacgtaa agcctcgtta aagccagttt tgaccagaag 3960 cagcaatgag tctattcctg tgtgttttcc atgttaatgg gacaaaatga tactttcaag 4020 gcattgaaaa ttcatgatta atcaatcgct agtctgaccc cagtgttatc tatgcaggtt 4080 tgcaaaacct ttagtttact taatactccc ttgccttctt ttgattcaca tcctaatgcc 4140 agcaaatact tatgtttttg ctatttcagt tccatttcca taaaatttat tttatcatct 4200 tttctcataa atttatgccc tctattttta ctcccaatct gtttaagatg aacaaatctt 4260 ataaggccac atagctgact gttatttctg ttggactcca ggaaggagaa cctaaagaaa 4320 agttcaagtc caagcagaaa ccgtgatttc ttccagatga tggctcatga gtgccattta 4380 attggggtgc cacctggtga cctcagcaaa tcccagctat atttatgtgt tcacattaca 4440 ggatcattaa cccagaccga ccactgcaca gatctcagaa tattttctat ggagaacata 4500 cataataatg cctgatttca gaagaagaaa gtaattctca atagcaaggg gatggagtag 4560 ggtagacagc tgtaattaaa ctcacttgtg tgataaaaag aaattaagga aaaaagaaaa 4620 tgagagaaca tattactaaa taaagaaagc atacattaaa tatttactat agtttcacac 4680 taagagaata aaggaaatgc aataaagtgg cctgaaaggt aaaggatgag atgtgtaaag 4740 gggtgtagta tttttactat gagcagcaat ctgagaagat aaaggaatcg agttacgggc 4800 aaacatgatg tttgatcagt gttatttgtt ttcaaggcct gcctaaattt ttttcaaata 4860 ttacaaactt ttgaaataac attctttttg ttttttgctg tctgttacta ggttgcacat 4920 tttataaagg cagggaccat ggtatgttgt ttgtctttgg attctcagtg attgttatat 4980 ttatatttgt tgaaggaacc ttaatccaag acttggactc caagtatctt tccattctgg 5040 ttccaaggag ggaccttcct cacagcaggc atgctgtgtg gtctcacatc tcactcctat 5100 atctttccct gtctgttact gccctcagtg gagcccacag tgaccatctc cccatccagg 5160 acagaggccc tcaaccacca caacctgctg gtctgctcgg tgacagattt ctatccagcc 5220 cagatcaaag tccggtggtt tcggaatggc caggaggaga cagctggcgt tgtgtccacc 5280 ccccttatta ggaatggtga ctggaccttc cagatcctgg tgatgctgga aatgactccc 5340 cagcgtggag acgtctacac ctgccacgtg gagcacccca gcctccagag ccccatcacc 5400 gtggagtggc gtaaggggat attgagtttc tgttactgtg ggccccacaa gacaaaggac 5460 agagctcctt ctgacccatc ccttcccatc tcttatccct gatgtcactg ctgagctggg 5520 aatcacagga gactagagca cctctagttc catggcgagt gcatcagaag aatcctgatc 5580 tcatcacctt tccagatgct agggaaatta ctctacatac tgttgctctg gatcccagtc 5640 ctgattgctc tgaggaactg attattaggg ctggtgactg ggatcttagg gtctaagttt 5700 atggatgagt tcctgaggag tggagatctg cttccccact ctgtcaccta ctcactgtat 5760 ccaagtacct attggctggc ctttccctcc cttaggggtg gtctgaatgg agaactaggt 5820 tcctttgatg ccttcacctc ctgcatctca gactggactt cagctcctca tcagggaaac 5880 tatggggtat ggggacaaac actgacactc aggctctgct tctcaggggc tcaatctgaa 5940 tctgcccaga gcaagatgct gagtggcatt ggaggcttcg tgctggggct gatcttcctc 6000 gggctgggcc ttatcatcca tcacaggagt cagaaaggtg aggaacccca ggggaaaagg 6060 ggaagatggc ctgtgaccca gaccctctgt tcagagaggt cctgtctcta gatgtagctc 6120 tttcctcctg accctgagag gaagaaagct gagctggaag tggaaggaga caggacaagg 6180 ttggaggagg cattggaatc tgattttact agctgaaggg tagccctgtc acagagctga 6240 ctgatagagc ttattccagg gcatccttac cattcatcat tgtctcactg gctcctttcc 6300 aaaaacttcc tccattaaga gggtcagagc ctcggcctcc ttgccttcta gtgacaattt 6360 cctttatttt aggggatttt aaattagggt gcttaaggac ttgaagaaca tgaatgggaa 6420 gagaatataa ctctaattaa gtcacatgtg tcattttcct ttggggtgag agagtggctg 6480 ttcatgtaat gagacctttc tctgcataac ttccttttgt aagacctcaa gggcctccac 6540 cagcaggtaa tatttcagcc gtgatccagt gtggggaggg cacaggtgta agagggaaga 6600 gcatgagctg agtgtacctg acagtagtgg tctctgttca tggtatattt gctgctatga 6660 ggatcaagac ttaggggtga agtttgccag tttctaggaa tctccagagg ttgttcccca 6720 gaaccaagcc ttaactttgg tggtatcttc ctgtgaaatg tggagccaga accacggctt 6780 aaatgttaga cactaggatg atgcccactt tgtgccacat gatggtggct actgcctgta 6840 ggcattttcc agtgactgaa agaggctgct agtggtaggg atgaggtatc atccaatttc 6900 ctaaaaagat tgaacccttc atattcacca gaagagtaac agctgttccc ccacctccca 6960 cacatctgca tcaagctgaa gttctgtgtc ttcatgagct gatttcacct ttgcacagat 7020 cttgggggag gtgatgataa tacactctgg acctcagctt tgtctgtctg aagctgcagg 7080 aggcccctga ggggtggggg agatggcagg cccaccagcg taccctgtgc tgatcatccc 7140 tcttctctct tcttcagggc tcctgcactg actcctgaga ctattttaac tgggattggt 7200 tatcactttt ctgtaacgcc tgcttgtccc tgcccagaat tcccagctgt ctgtgtcagc 7260 ctgtccccct gagatcagag tcctacagtg gctgtcacgc agccaccagg tcatctcctt 7320 tcatccccac cttgaggcgg atggctgtga ccctacttcc tgcactgacc cacagcccct 7380 gcctgtgcac agccagctgc atctactcag gccccaaggg gtttctgttt ctattctctc 7440 c 7441 //