Dbfetch
ID OQ053269; SV 1; linear; genomic DNA; STD; HUM; 3087 BP. XX AC OQ053269; XX DT 14-JUN-2023 (Rel. 144, Created) DT 15-JUN-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens MHC class I antigen (HLA-A) gene, HLA-A*02:01:18extended DE allele, complete cds. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3087 RA Marin L.A.; RT ; RL Submitted (15-DEC-2022) to the INSDC. RL Inmunologia, Hospital Universitario de Albacete, Hermanos Falco, 37, RL Albacete, Albacete 02006, SPAIN XX DR MD5; 04ab7be3276866872a8148be1058a032. XX CC ##Assembly-Data-START## CC Assembly Method :: NGSengine v. 2.27.2.27406 CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3087 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..3087 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT mRNA join(1..180,311..580,822..1097,1698..1973,2073..2189, FT 2628..2660,2803..2850,3020..3087) FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /product="MHC class I antigen" FT exon 1..180 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=1 FT 5'UTR 1..107 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT CDS join(108..180,311..580,822..1097,1698..1973,2073..2189, FT 2628..2660,2803..2850,3020..3024) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /product="MHC class I antigen" FT /protein_id="WEW78909.1" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGT FT LRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" FT intron 181..310 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=1 FT exon 311..580 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=2 FT intron 581..821 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=2 FT exon 822..1097 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=3 FT intron 1098..1697 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=3 FT exon 1698..1973 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=4 FT intron 1974..2072 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=4 FT exon 2073..2189 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=5 FT intron 2190..2627 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=5 FT exon 2628..2660 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=6 FT intron 2661..2802 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=6 FT exon 2803..2850 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=7 FT intron 2851..3019 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=7 FT exon 3020..3087 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" FT /number=8 FT 3'UTR 3025..3087 FT /gene="HLA-A" FT /allele="HLA-A*02:01:18extended" XX SQ Sequence 3087 BP; 598 A; 879 C; 956 G; 654 T; 0 other; tcccattggg tgtcgggttt ccagagaagc caatcagtgt cgtcgcggtc gcggttctaa 60 agtccgcacg cacccaccgg gactcagatt ctccccagac gccgaggatg gccgtcatgg 120 cgccccgaac cctcgtcctg ctactctcgg gggctctggc cctgacccag acctgggcgg 180 gtgagtgcgg ggtcgggagg gaaacggcct ctgtggggag aagcaacggg cccgcctggc 240 gggggcgcag gacccgggaa gccgcgccgg gaggagggtc gggcgggtct cagccactcc 300 tcgtccccag gctctcactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc 360 ggggagcccc gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac 420 agcgacgccg cgagccagag gatggagccg cgggcgccgt ggatagagca ggagggtccg 480 gagtattggg acggggagac acggaaagtg aaggcccact cacagactca ccgagtggac 540 ctggggaccc tgcgcggcta ctacaaccag agcgaggccg gtgagtgacc ccggcccggg 600 gcgcaggtca cgacctctca tcccccacgg acgggccagg tcgcccacag tctccgggtc 660 cgagatccgc cccgaagccg cgggaccccg agacccttgc cccgggagag gcccaggcgc 720 ctttacccgg tttcattttc agtttaggcc aaaaatcccc ccaggttggt cggggcgggg 780 cggggctcgg gggaccgggc tgaccgcggg gtccgggcca ggttctcaca ccgtccagag 840 gatgtatggc tgcgacgtgg ggtcggactg gcgcttcctc cgcgggtacc accagtacgc 900 ctacgacggc aaggattaca tcgccctgaa agaggacctg cgctcttgga ccgcggcgga 960 catggcagct cagaccacca agcacaagtg ggaggcggcc catgtggcgg agcagttgag 1020 agcctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1080 gacgctgcag cgcactggta ccaggggcca cggggcgcct ccctgatcgc ctgtagatct 1140 cccgggctgg cctcccacaa ggaggggaga caattgggac caacactaga atatcgccct 1200 ccctctggtc ctgagggaga ggaatcctcc tgggtttcca gatcctgtac cagagagtga 1260 ctctgaggtt ccgccctgct ctctgacaca attaagggat aaaatctctg aaggaatgac 1320 gggaagacga tccctcgaat actgatgagt ggttcccttt gacacacaca ggcagcagcc 1380 ttgggcccgt gacttttcct ctcaggcctt gttctctgct tcacactcaa tgtgtgtggg 1440 ggtctgagtc cagcacttct gagtccttca gcctccactc aggtcaggac cagaagtcgc 1500 tgttccctct tcagggacta gaattttcca cggaatagga gattatccca ggtgcctgtg 1560 tccaggctgg tgtctgggtt ctgtgctccc ttccccatcc caggtgtcct gtccattctc 1620 aagatagcca catgtgtgct ggaggagtgt cccatgacag atgcaaaatg cctgaatgat 1680 ctgactcttc ctgacagacg cccccaaaac gcatatgact caccacgctg tctctgacca 1740 tgaagccacc ctgaggtgct gggccctgag cttctaccct gcggagatca cactgacctg 1800 gcagcgggat ggggaggacc agacccagga cacggagctc gtggagacca ggcctgcagg 1860 ggatggaacc ttccagaagt gggcggctgt ggtggtgcct tctggacagg agcagagata 1920 cacctgccat gtgcagcatg agggtttgcc caagcccctc accctgagat ggggtaagga 1980 gggagacggg ggtgtcatgt cttttaggga aagcaggagc ctctctgacc tttagcaggg 2040 tcagggcccc tcaccttccc ctcttttccc agagccgtct tcccagccca ccatccccat 2100 cgtgggcatc attgctggcc tggttctctt tggagctgtg atcactggag ctgtggtcgc 2160 tgctgtgatg tggaggagga agagctcagg tggggaaggg gtgaagggtg ggtctgagat 2220 ttcttgtctc actgagggtt ccaagaccca ggtagaagtg tgccctgcct cgttactggg 2280 aagcaccacc cacaattatg ggcctaccca gcctgggccc tgtgtgccag cacttactct 2340 tttgtaaagc acctgttaaa atgaaggaca gatttatcac cttgattaca gcggtgatgg 2400 gacctgatcc cagcagtcac aagtcacagg ggaaggtccc tgaggacctt caggagggcg 2460 gttggtccag gacccacacc tgctttcttc atgtttcctg atcccgccct gggtctgcag 2520 tcacacattt ctggaaactt ctctgaggtc caagacttgg aggttcctct aggaccttaa 2580 ggccctgact cctttctggt atctcacagg acattttctt cccacagata gaaaaggagg 2640 gagctactct caggctgcaa gtaagtatga aggaggctga tgcctgaggt ccttgggata 2700 ttgtgtttgg gagcccatgg gggagctcac ccaccccaca attcctcctc tagccacatc 2760 ttctgtggga tctgaccagg ttctgttttt gttctacccc aggcagtgac agtgcccagg 2820 gctctgatgt gtctctcaca gcttgtaaag gtgagagcct ggagggcctg atgtgtgttg 2880 ggtgttgggc ggaacagtgg acacagctgt gctatggggt ttctttccat tggatgtatt 2940 gagcatgcga tgggctgttt aaagtgtgac ccctcactgt gacagatacg aatttgttca 3000 tgaatatttt tttctatagt gtgagacagc tgccttgtgt gggactgaga ggcaagagtt 3060 gttcctgccc ttccctttgt gacttga 3087 //