Dbfetch

Dbfetch

ID   OP807083; SV 1; linear; genomic DNA; STD; HUM; 1083 BP.
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AC   OP807083;
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DT   27-DEC-2022 (Rel. 144, Created)
DT   15-JUN-2023 (Rel. 144, Last updated, Version 2)
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DE   Homo sapiens MHC class II antigen (HLA-DPA1) gene, HLA-DPA1*02:new allele,
DE   complete cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1083
RA   Hu Q., Burns C., Galaszkiewicz I., Khan F., Berka N.;
RT   ;
RL   Submitted (10-NOV-2022) to the INSDC.
RL   Histocompatibility and Immunogenetics Lab, Alberta Precision Laboratories,
RL   9, 3535 Research Road NW, Calgary, Alberta T2L 2K8, Canada
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DR   MD5; 57f60620e9b3cf73b21764f3f4dacaa7.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: MIA FORA Flex v. 4.5
CC   Sequencing Technology :: Illumina
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1083
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="peripheral blood leukocytes"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1083
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02:new"
FT   mRNA            join(<1..100,201..446,547..828,929..>1083)
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02:new"
FT                   /product="MHC class II antigen"
FT   CDS             join(1..100,201..446,547..828,929..1083)
FT                   /codon_start=1
FT                   /gene="HLA-DPA1"
FT                   /allele="HLA-DPA1*02:new"
FT                   /product="MHC class II antigen"
FT                   /protein_id="WAS29293.1"
FT                   /translation="MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQ
FT                   THRSTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNTL
FT                   IQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVTEGV
FT                   AESLFLPRTDYSFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTE
FT                   TVLCALGLVLGLVGIIVGTVLIIKSLRSGHDPRAQGPL"
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SQ   Sequence 1083 BP; 167 A; 220 C; 216 G; 180 T; 300 other;
     atgcgccctg aagacagaat gttccatatc agagctgtga tcttgagagc cctctccttg        60
     gctttcctgc tgagtctccg aggagctggg gccatcaagg nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       180
     nnnnnnnnnn nnnnnnnnnn cggaccatgt gtcaacttat gccgcgtttg tacagaccca       240
     tagatcaaca ggggagttta tgtttgaatt tgatgaagat gagcagttct atgtggatct       300
     ggataaaaag gagaccgtct ggcatctgga ggagtttggc cgagcctttt cctttgaggc       360
     tcagggcggg ctggctaaca ttgctatatt gaacaacaac ttgaatacct tgatccagcg       420
     ttccaaccac actcaggccg ccaatgnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       540
     nnnnnnatcc ccctgaggtg accgtgtttc ccaaggagcc tgtggagctg ggccagccca       600
     acaccctcat ctgccacatt gacaggttct tcccaccagt gctcaacgtc acatggctgt       660
     gcaatgggga gccagtcact gagggtgtcg ctgagagcct cttcctgccc agaacagatt       720
     acagcttcca caagttccat tacctgacct ttgtgccctc agcagaggac gtctatgact       780
     gcagggtgga gcactggggc ttggaccagc cgctcctcaa gcactgggnn nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnag gcccaagagc caatccagat gcctgagaca       960
     acggagactg tgctctgtgc cctgggcctg gtgctgggcc tagtgggcat catcgtgggc      1020
     accgtcctca tcataaagtc tctgcgttct ggccatgacc cccgggccca ggggcccctg      1080
     tga                                                                    1083
//