Dbfetch
ID OP270230; SV 1; linear; genomic DNA; STD; HUM; 3989 BP. XX AC OP270230; XX DT 15-JUN-2023 (Rel. 144, Created) DT 16-JUN-2023 (Rel. 144, Last updated, Version 1) XX DE Homo sapiens isolate 1905601-0-79-2-1539254 nonfunctional MHC class I DE antigen (HLA-B) gene, HLA-B*55:132N allele, complete sequence. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3989 RA Silva J.S., Goldenstein M., Vinhal F.A.; RT ; RL Submitted (17-AUG-2022) to the INSDC. RL HLAGyn, Francisco H. dos Santos, 100, Aparecida de Goiania, Goainia RL 74935900, Brazil XX DR MD5; e6a670537e4b4f5609f3d1a3504e11d6. XX CC ##Assembly-Data-START## CC Assembly Method :: TypeStrean Visual and NGS Engine v. 2.1.0 CC and 2.26.1.26336 CC Assembly Name :: Default, Classical CC Coverage :: 500x CC Sequencing Technology :: Illumina CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3989 FT /organism="Homo sapiens" FT /isolate="1905601-0-79-2-1539254" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gene 1..3989 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /note="nonfunctional MHC class I antigen; null allele" FT exon 1..357 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=1 FT 5'UTR 1..284 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT intron 358..485 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=1 FT exon 486..755 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=2 FT intron 756..1000 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=2 FT exon 1001..1276 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=3 FT intron 1277..1851 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=3 FT exon 1852..2126 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=4 FT intron 2127..2230 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=4 FT exon 2231..2347 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=5 FT intron 2348..2788 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=5 FT exon 2789..2821 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=6 FT intron 2822..2927 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=6 FT exon 2928..3989 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" FT /number=7 FT 3'UTR 2972..3989 FT /gene="HLA-B" FT /allele="HLA-B*55:132N" XX SQ Sequence 3989 BP; 749 A; 1132 C; 1212 G; 896 T; 0 other; gatcaggacg aagtcccatg tcccggacgg ggctctcagg gtctcaggct ccgagggccg 60 cgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcagagtct cctcagacac cgagatgcgg gtcacggcac 300 cccgaaccct cctcctgctg ctctgggggg ccctggccct gaccgagacc tgggccggtg 360 agtgcgggtc gggagggaaa tggcctctgt ggggaggagc gaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtctggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggagta 660 ttgggaccgg aacacacaga tctacaaggc ccaggcacag actgaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc 960 ggggctcggg ggacggggct gaccgcgggg ccggggccag ggtctcacac ttggcagacg 1020 atgtatggct gcgacctggg gccggacggg cgcctcctcc gcgggcataa ccagttagcc 1080 tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac 1140 accgcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1200 gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260 acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320 cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380 ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440 taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500 tgatcagggg tcctctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560 gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620 actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680 ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740 ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800 gtgtcctatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860 agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920 tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980 aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040 ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgagggct 2100 gccgaagccc ctcaccctga gatggggtaa ggagggggat gaggggtcat atctcttctc 2160 agggaaagca ggagcccttc tggagccctt cagcagggtc agggcccctc gtcttcccct 2220 cctttcccag agccatcttc ccagtccacc atccccatcg tgggcattgt tgctggcctg 2280 gctgtcctag cagttgtggt catcggagct gtggtcgcta ctgtgatgtg taggaggaag 2340 agctcaggta gggaaggggt gaggggtggg gtctgggttt tcttgtccca ctgggggttt 2400 caagccccag gtagaagtgt tccctgcctc attactggga agcagcatcc acacaggggc 2460 taatgcagcc tgggaccctg tgtgccagca cttactcttt tgtgcagcac atgtgacaat 2520 gaaggacgga tgtatcacct tgatggttgt ggtgttgggg tcctgatttc agcattcatg 2580 agtcagggga aggtccctgc taaggacaga ccttaggagg gcagttggtc caggacccac 2640 acttgctttc ctcgtgtttc ctgatcctgc cttgggtctg tagtcatact tctggaaatt 2700 ccttttgggt ccaagacgag gaggttcctc taagatctca tggccctgct tcctcccagt 2760 cccctcacag gacattttct tcccacaggt ggaaaaggag ggagctactc tcaggctgcg 2820 tgtaagtggt gggggtggga gtgtggagga gctcacccac cccataattc ctcctgtccc 2880 acgtctcctg cgggctctga ccaggtcctg tttttgttct actccagcca gcgacagtgc 2940 ccagggctct gatgtgtctc tcacagcttg aaaaggtgag attcttgggg tctagagtgg 3000 gcgggggggg tggggtgggg agggggcaga ggggaaaggc ctgggtaatg gagattcttt 3060 gattgggatg tttcgcgtgt gtggtgggct gtttagagtg tcatcactta ccatgactaa 3120 ccagaatttg ttcatgactg ttgttttctg tagcctgaga cagctgtctt gtgagggact 3180 gagatgcagg atttcttcac tcctcccctt tgtgacttca agagcctctg gcatctcttt 3240 ctgcaaaggc acctgaatgt gtctgcgtcc ctgttagcat aatgtgagga ggtggagaga 3300 cagcccaccc ccgtgtccac tgtgacccct gttcccatgc tgacctgtgt ttcctcccca 3360 gtcatctttc ctgttccaga ggggtggggc tggatgtctc catctctgtc tcaactttat 3420 gtgcactgag ctgcaacttc ttacttccct actgaaaata agaatctgaa tataaatttg 3480 ttttctcaaa tatttgctat gagaggttga tggattaatt aaataagtca attcctggaa 3540 tgtgagagag caaataaaga cctgagaact ttccagaatc tgcatgttcg ctgtgctgag 3600 tctgttgcag gtggggtgtg gagaaggctg tggggggccg agtgtggaca gggcctgtgc 3660 ccagttgttg ttgagcccat catgggcttt atgtggttag tcctcagctg ggtcaccttc 3720 actgccccat tgtccttgtc ccttcagcgg aaacttgtcc agtgggagct gtgaccacag 3780 aggctcacac atcgcccagg gtggcccctg cacacggggg tctctgtgca ttctgagaca 3840 aattttcaga gccattcacc tcctgccctg cttctagagc tccttttctg ctctgctctc 3900 ctgccctctc tccctgccct ggttctagtg atcttggtgc tgaatccaat cccaactcct 3960 gaatctgtaa agcagagtct aatttagac 3989 //